Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:42:00 (2370326): wrapper (7.7.26015): starting
11:42:00 (2370326): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 11:42:00] Arguments: --nthreads 4
[2026-03-04 11:42:00] Threads: 4
[2026-03-04 11:42:00] Checking for CVMFS
[2026-03-04 11:42:00] No cvmfs_config command found, will try listing directly
[2026-03-04 11:42:00] CVMFS is ok
[2026-03-04 11:42:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 11:42:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 11:42:00] Further information can be found at the LHC@home message board.
[2026-03-04 11:42:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 11:42:00] Checking for apptainer binary...
[2026-03-04 11:42:00] which: no apptainer in ((null))
[2026-03-04 11:42:00] apptainer is not installed, using version from CVMFS
[2026-03-04 11:42:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 11:42:01] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-04 11:42:01] apptainer works
[2026-03-04 11:42:01] Set ATHENA_PROC_NUMBER=4
[2026-03-04 11:42:01] Set ATHENA_CORE_NUMBER=4
[2026-03-04 11:42:01] Starting ATLAS job with PandaID=7036924664
[2026-03-04 11:42:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 13:40:31]  *** The last 200 lines of the pilot log: ***
[2026-03-04 13:40:31] 2026-03-04 12:39:52,444 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 13:40:31] 2026-03-04 12:39:52,445 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 13:40:31] 2026-03-04 12:39:52,445 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 13:40:31] 2026-03-04 12:39:52,445 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 13:40:31] 2026-03-04 12:39:52,447 | INFO     | fitting pss+swap vs Time
[2026-03-04 13:40:31] 2026-03-04 12:39:52,447 | INFO     | sum of square deviations: 483971865.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,448 | INFO     | sum of deviations: 3730543267.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,448 | INFO     | mean x: 1772624468.5
[2026-03-04 13:40:31] 2026-03-04 12:39:52,448 | INFO     | mean y: 2307534.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,448 | INFO     | intersect: -13661404665.224905
[2026-03-04 13:40:31] 2026-03-04 12:39:52,448 | INFO     | chi2: 1.9454438367731823
[2026-03-04 13:40:31] 2026-03-04 12:39:52,449 | INFO     | sum of square deviations: 424045160.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,449 | INFO     | sum of deviations: 10674494798.000004
[2026-03-04 13:40:31] 2026-03-04 12:39:52,449 | INFO     | mean x: 1772624316.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,450 | INFO     | mean y: 2324550.189189189
[2026-03-04 13:40:31] 2026-03-04 12:39:52,450 | INFO     | intersect: -44619972376.74736
[2026-03-04 13:40:31] 2026-03-04 12:39:52,450 | INFO     | chi2: 1.1275283211234572
[2026-03-04 13:40:31] 2026-03-04 12:39:52,450 | INFO     | current chi2=1.1275283211234572 (change=42.04261774045165 %)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,450 | INFO     | sum of square deviations: 369281342.5
[2026-03-04 13:40:31] 2026-03-04 12:39:52,451 | INFO     | sum of deviations: 10101430847.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,451 | INFO     | mean x: 1772624163.5
[2026-03-04 13:40:31] 2026-03-04 12:39:52,451 | INFO     | mean y: 2322953.2264150945
[2026-03-04 13:40:31] 2026-03-04 12:39:52,451 | INFO     | intersect: -48486561657.33707
[2026-03-04 13:40:31] 2026-03-04 12:39:52,451 | INFO     | chi2: 1.129349764749195
[2026-03-04 13:40:31] 2026-03-04 12:39:52,451 | INFO     | current chi2=1.129349764749195 (change=-0.1615430487744118 %)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,451 | INFO     | right removable region: 105
[2026-03-04 13:40:31] 2026-03-04 12:39:52,452 | INFO     | sum of square deviations: 424045160.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,452 | INFO     | sum of deviations: -7939611648.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,452 | INFO     | mean x: 1772624621.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,452 | INFO     | mean y: 2336453.882882883
[2026-03-04 13:40:31] 2026-03-04 12:39:52,452 | INFO     | intersect: 33192082301.76188
[2026-03-04 13:40:31] 2026-03-04 12:39:52,453 | INFO     | chi2: 0.8510811079396218
[2026-03-04 13:40:31] 2026-03-04 12:39:52,453 | INFO     | current chi2=0.8510811079396218 (change=56.25259944017347 %)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,453 | INFO     | sum of square deviations: 369281342.5
[2026-03-04 13:40:31] 2026-03-04 12:39:52,453 | INFO     | sum of deviations: -7322643434.999999
[2026-03-04 13:40:31] 2026-03-04 12:39:52,454 | INFO     | mean x: 1772624773.5
[2026-03-04 13:40:31] 2026-03-04 12:39:52,454 | INFO     | mean y: 2334730.7924528304
[2026-03-04 13:40:31] 2026-03-04 12:39:52,454 | INFO     | intersect: 35152497131.39664
[2026-03-04 13:40:31] 2026-03-04 12:39:52,454 | INFO     | chi2: 0.8521258723656073
[2026-03-04 13:40:31] 2026-03-04 12:39:52,454 | INFO     | current chi2=0.8521258723656073 (change=-0.12275732785501739 %)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,454 | INFO     | left removable region: 20
[2026-03-04 13:40:31] 2026-03-04 12:39:52,454 | INFO     | sum of square deviations: 190403570.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,455 | INFO     | sum of deviations: 202190051.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,455 | INFO     | mean x: 1772624743.0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,455 | INFO     | mean y: 2351371.0823529414
[2026-03-04 13:40:31] 2026-03-04 12:39:52,455 | INFO     | intersect: -1880003498.582286
[2026-03-04 13:40:31] 2026-03-04 12:39:52,455 | INFO     | chi2: 0.00089740562365606
[2026-03-04 13:40:31] 2026-03-04 12:39:52,455 | INFO     | current memory leak: 1.06 B/s (using 85 data points, chi2=0.00)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | could have reported an average CPU frequency of 2726 MHz (7 samples)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | ..............................
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . Timing measurements:
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . get job = 0 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . initial setup = 6 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . payload setup = 7 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . stage-in = 0 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . payload execution = 7028 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . stage-out = 0 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | . log creation = 0 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,456 | INFO     | ..............................
[2026-03-04 13:40:31] 2026-03-04 12:39:52,544 | INFO     | 
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | job summary report
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | --------------------------------------------------
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | PanDA job id: 7036924664
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | task id: 48838605
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | errors: (none)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | pilot state: finished 
[2026-03-04 13:40:31] 2026-03-04 12:39:52,545 | INFO     | transexitcode: 0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | exeerrorcode: 0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | exeerrordiag: 
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | exitcode: 0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | exitmsg: OK
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | cpuconsumptiontime: 27024 s
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | nevents: 400
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | neventsw: 0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | pid: 2379345
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | pgrp: 2379345
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | corecount: 4
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | event service: False
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | sizes: {0: 2286774, 1: 2287036, 11: 2287064, 7040: 2314420, 7041: 2323440, 7043: 2323496, 7044: 2323818}
[2026-03-04 13:40:31] 2026-03-04 12:39:52,546 | INFO     | --------------------------------------------------
[2026-03-04 13:40:31] 2026-03-04 12:39:52,547 | INFO     | 
[2026-03-04 13:40:31] 2026-03-04 12:39:52,547 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2026-03-04 13:40:31] 2026-03-04 12:39:52,576 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,576 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,576 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | job 7036924664 has completed (purged errors)
[2026-03-04 13:40:31] 2026-03-04 12:39:52,578 | INFO     | overall cleanup function is called
[2026-03-04 13:40:31] 2026-03-04 12:39:53,587 | INFO     | --- collectZombieJob: --- 10, [2379345]
[2026-03-04 13:40:31] 2026-03-04 12:39:53,587 | INFO     | zombie collector waiting for pid 2379345
[2026-03-04 13:40:31] 2026-03-04 12:39:53,588 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 13:40:31] 2026-03-04 12:39:53,588 | INFO     | collected zombie processes
[2026-03-04 13:40:31] 2026-03-04 12:39:53,588 | INFO     | will attempt to kill all subprocesses of pid=2379345
[2026-03-04 13:40:31] 2026-03-04 12:39:54,119 | INFO     | process IDs to be killed: [2379345] (in reverse order)
[2026-03-04 13:40:31] 2026-03-04 12:39:54,321 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 13:40:31] 2026-03-04 12:39:54,322 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 13:40:31] 2026-03-04 12:39:54,341 | INFO     | did not find any defunct processes belonging to 2379345
[2026-03-04 13:40:31] 2026-03-04 12:39:54,355 | INFO     | did not find any defunct processes belonging to 2379345
[2026-03-04 13:40:31] 2026-03-04 12:39:54,355 | INFO     | ready for new job
[2026-03-04 13:40:31] 2026-03-04 12:39:54,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 13:40:31] 2026-03-04 12:39:54,358 | INFO     | **************************************
[2026-03-04 13:40:31] 2026-03-04 12:39:54,358 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 13:40:31] 2026-03-04 12:39:54,358 | INFO     | **************************************
[2026-03-04 13:40:31] 2026-03-04 12:39:54,358 | INFO     | 
[2026-03-04 13:40:31] 2026-03-04 12:39:54,366 | INFO     | architecture information:
[2026-03-04 13:40:31] 2026-03-04 12:39:54,367 | INFO     | executing command: cat /etc/os-release
[2026-03-04 13:40:31] 2026-03-04 12:39:54,391 | INFO     | cat /etc/os-release:
[2026-03-04 13:40:31] NAME="CentOS Linux"
[2026-03-04 13:40:31] VERSION="7 (Core)"
[2026-03-04 13:40:31] ID="centos"
[2026-03-04 13:40:31] ID_LIKE="rhel fedora"
[2026-03-04 13:40:31] VERSION_ID="7"
[2026-03-04 13:40:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 13:40:31] ANSI_COLOR="0;31"
[2026-03-04 13:40:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 13:40:31] HOME_URL="https://www.centos.org/"
[2026-03-04 13:40:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 13:40:31] 
[2026-03-04 13:40:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 13:40:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 13:40:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 13:40:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 13:40:31] 
[2026-03-04 13:40:31] 2026-03-04 12:39:54,391 | INFO     | **************************************
[2026-03-04 13:40:31] 2026-03-04 12:39:54,896 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2026-03-04 13:40:31] 2026-03-04 12:39:54,921 | INFO     | sufficient remaining disk space (3318666493952 B)
[2026-03-04 13:40:31] 2026-03-04 12:39:54,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 13:40:31] 2026-03-04 12:39:54,922 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 13:40:31] 2026-03-04 12:39:54,922 | INFO     | update_server=False
[2026-03-04 13:40:31] 2026-03-04 12:39:54,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 13:40:31] 2026-03-04 12:39:54,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 13:40:31] 2026-03-04 12:39:55,053 | INFO     | all payload control threads have been joined
[2026-03-04 13:40:31] 2026-03-04 12:39:55,569 | WARNING  | process 2379345 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 13:40:31] 2026-03-04 12:39:55,927 | INFO     | [job] retrieve thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:55,937 | INFO     | all data control threads have been joined
[2026-03-04 13:40:31] 2026-03-04 12:39:55,948 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 13:40:31] 2026-03-04 12:39:55,983 | INFO     | all job control threads have been joined
[2026-03-04 13:40:31] 2026-03-04 12:39:56,012 | INFO     | [job] validate thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,058 | INFO     | [payload] control thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,202 | INFO     | [payload] failed_post thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,238 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,351 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,462 | INFO     | number of running child processes to parent process 2379345: 1
[2026-03-04 13:40:31] 2026-03-04 12:39:56,463 | INFO     | maximum number of monitored processes: 6
[2026-03-04 13:40:31] 2026-03-04 12:39:56,463 | INFO     | aborting job monitoring since job object (job id=7036924664) has expired
[2026-03-04 13:40:31] 2026-03-04 12:39:56,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:40:31] 2026-03-04 12:39:56,463 | INFO     | will abort loop
[2026-03-04 13:40:31] 2026-03-04 12:39:56,780 | INFO     | [data] copytool_in thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,871 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,928 | INFO     | [data] copytool_out thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 13:40:31] 2026-03-04 12:39:56,943 | INFO     | [data] control thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:56,988 | INFO     | [job] control thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:57,461 | INFO     | [payload] validate_post thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:57,468 | INFO     | [job] job monitor thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:39:57,554 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:40:31] 2026-03-04 12:39:58,560 | INFO     | [job] queue monitor thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:40:00,942 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:40:05,676 | INFO     | job.realtimelogging is not enabled
[2026-03-04 13:40:31] 2026-03-04 12:40:06,681 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 13:40:31] 2026-03-04 12:40:24,503 | INFO     | PID=2374362 has CPU usage=11.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 13:40:31] 2026-03-04 12:40:24,503 | INFO     | .. there are 17 such processes running
[2026-03-04 13:40:31] 2026-03-04 12:40:24,504 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 13:40:31] 2026-03-04 12:40:24,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 13:40:31] 2026-03-04 12:40:24,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 13:40:31] 2026-03-04 12:40:25,626 | INFO     | [monitor] cgroup control has ended
[2026-03-04 13:40:31] 2026-03-04 12:40:26,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23366464296768)>', '<ExcThread(monitor, started 23366155085568)>']
[2026-03-04 13:40:31] 2026-03-04 12:40:26,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 13:40:31] 2026-03-04 12:40:26,515 | INFO     | [monitor] control thread has ended
[2026-03-04 13:40:31] 2026-03-04 12:40:31,203 | INFO     | all workflow threads have been joined
[2026-03-04 13:40:31] 2026-03-04 12:40:31,203 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 13:40:31] 2026-03-04 12:40:31,203 | INFO     | traces error code: 0
[2026-03-04 13:40:31] 2026-03-04 12:40:31,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 13:40:31] 2026-03-04 12:40:31,317 [wrapper] ==== pilot stdout END ====
[2026-03-04 13:40:31] 2026-03-04 12:40:31,321 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 13:40:31] 2026-03-04 12:40:31,324 [wrapper] pilotpid: 2374362
[2026-03-04 13:40:31] 2026-03-04 12:40:31,328 [wrapper] Pilot exit status: 0
[2026-03-04 13:40:31] 2026-03-04 12:40:31,342 [wrapper] pandaids: 7036924664
[2026-03-04 13:40:31] 2026-03-04 12:40:31,461 [wrapper] cleanup supervisor_pilot 2574243 2374363
[2026-03-04 13:40:31] 2026-03-04 12:40:31,465 [wrapper] Test setup, not cleaning
[2026-03-04 13:40:31] 2026-03-04 12:40:31,469 [wrapper] apfmon messages muted
[2026-03-04 13:40:31] 2026-03-04 12:40:31,473 [wrapper] ==== wrapper stdout END ====
[2026-03-04 13:40:31] 2026-03-04 12:40:31,476 [wrapper] ==== wrapper stderr END ====
[2026-03-04 13:40:31]  *** Error codes and diagnostics ***
[2026-03-04 13:40:31]     "exeErrorCode": 0,
[2026-03-04 13:40:31]     "exeErrorDiag": "",
[2026-03-04 13:40:31]     "pilotErrorCode": 0,
[2026-03-04 13:40:31]     "pilotErrorDiag": "",
[2026-03-04 13:40:31]  *** Listing of results directory ***
[2026-03-04 13:40:31] total 491980
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc    584627 Mar  4 01:25 pilot3.tar.gz
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc      5111 Mar  4 01:29 queuedata.json
[2026-03-04 13:40:31] -rwx------ 1 boinc boinc     36322 Mar  4 01:29 runpilot2-wrapper.sh
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc       100 Mar  4 11:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 13:40:31] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 11:41 run_atlas
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc       105 Mar  4 11:41 job.xml
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc      6697 Mar  4 11:42 init_data.xml
[2026-03-04 13:40:31] -rw-r--r-- 2 boinc boinc 281830412 Mar  4 11:42 EVNT.48343768._000124.pool.root.1
[2026-03-04 13:40:31] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:42 start_atlas.sh
[2026-03-04 13:40:31] drwxrwx--x 2 boinc boinc      4096 Mar  4 11:42 shared
[2026-03-04 13:40:31] -rw-r--r-- 2 boinc boinc    597959 Mar  4 11:42 input.tar.gz
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc         0 Mar  4 11:42 boinc_lockfile
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc      2564 Mar  4 11:42 pandaJob.out
[2026-03-04 13:40:31] -rw------- 1 boinc boinc    997376 Mar  4 11:42 agis_schedconf.cvmfs.json
[2026-03-04 13:40:31] -rw------- 1 boinc boinc   1516092 Mar  4 11:42 agis_ddmendpoints.agis.ALL.json
[2026-03-04 13:40:31] -rw------- 1 boinc boinc       443 Mar  4 11:42 workernode_map.json
[2026-03-04 13:40:31] drwx------ 5 boinc boinc      4096 Mar  4 11:42 pilot3
[2026-03-04 13:40:31] -rw------- 1 boinc boinc 215419927 Mar  4 13:39 HITS.48838605._003212.pool.root.1
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc       529 Mar  4 13:39 boinc_task_state.xml
[2026-03-04 13:40:31] -rw------- 1 boinc boinc      1024 Mar  4 13:39 memory_monitor_summary.json
[2026-03-04 13:40:31] -rw------- 1 boinc boinc    298884 Mar  4 13:39 log.48838605._003212.job.log.tgz.1
[2026-03-04 13:40:31] -rw------- 1 boinc boinc      6344 Mar  4 13:39 heartbeat.json
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc        27 Mar  4 13:40 wrapper_checkpoint.txt
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc      8192 Mar  4 13:40 boinc_mmap_file
[2026-03-04 13:40:31] -rw------- 1 boinc boinc        95 Mar  4 13:40 pilot_heartbeat.json
[2026-03-04 13:40:31] -rw------- 1 boinc boinc      5436 Mar  4 13:40 pilotlog.txt
[2026-03-04 13:40:31] -rw------- 1 boinc boinc   1003157 Mar  4 13:40 log.48838605._003212.job.log.1
[2026-03-04 13:40:31] -rw------- 1 boinc boinc       357 Mar  4 13:40 output.list
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc       620 Mar  4 13:40 runtime_log
[2026-03-04 13:40:31] -rw------- 1 boinc boinc   1320960 Mar  4 13:40 result.tar.gz
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc      9204 Mar  4 13:40 runtime_log.err
[2026-03-04 13:40:31] -rw------- 1 boinc boinc       662 Mar  4 13:40 MTnLDmIIpH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkSILDmcwsbXn.diag
[2026-03-04 13:40:31] -rw-r--r-- 1 boinc boinc     20833 Mar  4 13:40 stderr.txt
[2026-03-04 13:40:31] HITS file was successfully produced:
[2026-03-04 13:40:31] -rw------- 1 boinc boinc 215419927 Mar  4 13:39 shared/HITS.pool.root.1
[2026-03-04 13:40:31]  *** Contents of shared directory: ***
[2026-03-04 13:40:31] total 487500
[2026-03-04 13:40:31] -rw-r--r-- 2 boinc boinc 281830412 Mar  4 11:42 ATLAS.root_0
[2026-03-04 13:40:31] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:42 start_atlas.sh
[2026-03-04 13:40:31] -rw-r--r-- 2 boinc boinc    597959 Mar  4 11:42 input.tar.gz
[2026-03-04 13:40:31] -rw------- 1 boinc boinc 215419927 Mar  4 13:39 HITS.pool.root.1
[2026-03-04 13:40:31] -rw------- 1 boinc boinc   1320960 Mar  4 13:40 result.tar.gz
13:40:32 (2370326): run_atlas exited; CPU time 27321.068940
13:40:32 (2370326): called boinc_finish(0)

</stderr_txt>
]]>

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