Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:12:47 (20915): wrapper (7.7.26015): starting
01:12:47 (20915): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 01:12:47] Arguments: --nthreads 8
[2026-03-04 01:12:47] Threads: 8
[2026-03-04 01:12:47] Checking for CVMFS
[2026-03-04 01:12:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 01:12:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 01:12:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 01:12:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 01:12:48] 2.11.2.0 2876 206462 79096 156871 0 52 15945358 20275201 1 130560 0 53750184 99.845 13921694 31497 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-03-04 01:12:48] CVMFS is ok
[2026-03-04 01:12:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 01:12:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 01:12:48] Further information can be found at the LHC@home message board.
[2026-03-04 01:12:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 01:12:48] Checking for apptainer binary...
[2026-03-04 01:12:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 01:12:48] Running /usr/bin/apptainer --version
[2026-03-04 01:12:48] apptainer version 1.3.2-1.el7
[2026-03-04 01:12:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 01:12:50] c-204-40.aglt2.org
[2026-03-04 01:12:50] apptainer works
[2026-03-04 01:12:50] Set ATHENA_PROC_NUMBER=8
[2026-03-04 01:12:50] Set ATHENA_CORE_NUMBER=8
[2026-03-04 01:12:50] Starting ATLAS job with PandaID=7037042320
[2026-03-04 01:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 03:43:39]  *** The last 200 lines of the pilot log: ***
[2026-03-04 03:43:39] 2026-03-04 08:42:34,645 | INFO     | total number of processed events: 400 (read)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,647 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7037042320/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,648 | INFO     | extracted standard info from prmon json
[2026-03-04 03:43:39] 2026-03-04 08:42:34,648 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 03:43:39] 2026-03-04 08:42:34,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 03:43:39] 2026-03-04 08:42:34,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 03:43:39] 2026-03-04 08:42:34,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 03:43:39] 2026-03-04 08:42:34,653 | INFO     | fitting pss+swap vs Time
[2026-03-04 03:43:39] 2026-03-04 08:42:34,653 | INFO     | sum of square deviations: 984941258.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,654 | INFO     | sum of deviations: 16797501070.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,654 | INFO     | mean x: 1772609278.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,654 | INFO     | mean y: 2481088.2108843536
[2026-03-04 03:43:39] 2026-03-04 08:42:34,654 | INFO     | intersect: -30228160589.20063
[2026-03-04 03:43:39] 2026-03-04 08:42:34,655 | INFO     | chi2: 2.3016448583701763
[2026-03-04 03:43:39] 2026-03-04 08:42:34,655 | INFO     | sum of square deviations: 887813855.5
[2026-03-04 03:43:39] 2026-03-04 08:42:34,656 | INFO     | sum of deviations: 25816453733.000004
[2026-03-04 03:43:39] 2026-03-04 08:42:34,656 | INFO     | mean x: 1772609125.5
[2026-03-04 03:43:39] 2026-03-04 08:42:34,656 | INFO     | mean y: 2494823.7464788733
[2026-03-04 03:43:39] 2026-03-04 08:42:34,656 | INFO     | intersect: -51542636164.76663
[2026-03-04 03:43:39] 2026-03-04 08:42:34,656 | INFO     | chi2: 1.5278299297052982
[2026-03-04 03:43:39] 2026-03-04 08:42:34,657 | INFO     | current chi2=1.5278299297052982 (change=33.620083734934944 %)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,657 | INFO     | sum of square deviations: 797291228.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,658 | INFO     | sum of deviations: 24842817605.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,658 | INFO     | mean x: 1772608973.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,658 | INFO     | mean y: 2493182.9635036495
[2026-03-04 03:43:39] 2026-03-04 08:42:34,658 | INFO     | intersect: -55230274787.77024
[2026-03-04 03:43:39] 2026-03-04 08:42:34,658 | INFO     | chi2: 1.5285074054307466
[2026-03-04 03:43:39] 2026-03-04 08:42:34,658 | INFO     | current chi2=1.5285074054307466 (change=-0.04434235200373933 %)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,659 | INFO     | right removable region: 136
[2026-03-04 03:43:39] 2026-03-04 08:42:34,659 | INFO     | sum of square deviations: 887813855.5
[2026-03-04 03:43:39] 2026-03-04 08:42:34,660 | INFO     | sum of deviations: -5943628451.999999
[2026-03-04 03:43:39] 2026-03-04 08:42:34,660 | INFO     | mean x: 1772609430.5
[2026-03-04 03:43:39] 2026-03-04 08:42:34,660 | INFO     | mean y: 2516297.2535211267
[2026-03-04 03:43:39] 2026-03-04 08:42:34,660 | INFO     | intersect: 11869566783.269861
[2026-03-04 03:43:39] 2026-03-04 08:42:34,660 | INFO     | chi2: 0.8845849106172622
[2026-03-04 03:43:39] 2026-03-04 08:42:34,661 | INFO     | current chi2=0.8845849106172622 (change=61.56727188382799 %)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,661 | INFO     | sum of square deviations: 797291228.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,662 | INFO     | sum of deviations: -11537728795.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,662 | INFO     | mean x: 1772609583.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,662 | INFO     | mean y: 2525615.9416058394
[2026-03-04 03:43:39] 2026-03-04 08:42:34,662 | INFO     | intersect: 25654242215.628117
[2026-03-04 03:43:39] 2026-03-04 08:42:34,662 | INFO     | chi2: 0.803525852150264
[2026-03-04 03:43:39] 2026-03-04 08:42:34,662 | INFO     | current chi2=0.803525852150264 (change=9.163513586325516 %)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,662 | INFO     | left removable region: 20
[2026-03-04 03:43:39] 2026-03-04 08:42:34,663 | INFO     | sum of square deviations: 483971865.0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,663 | INFO     | sum of deviations: -2207382508.499999
[2026-03-04 03:43:39] 2026-03-04 08:42:34,663 | INFO     | mean x: 1772609552.5
[2026-03-04 03:43:39] 2026-03-04 08:42:34,664 | INFO     | mean y: 2542309.525862069
[2026-03-04 03:43:39] 2026-03-04 08:42:34,664 | INFO     | intersect: 8087366249.835926
[2026-03-04 03:43:39] 2026-03-04 08:42:34,664 | INFO     | chi2: 0.0036141384139112124
[2026-03-04 03:43:39] 2026-03-04 08:42:34,664 | INFO     | current memory leak: -4.56 B/s (using 116 data points, chi2=0.00)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,664 | INFO     | could have reported an average CPU frequency of 1829 MHz (8 samples)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | ..............................
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | . Timing measurements:
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | . get job = 0 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | . initial setup = 8 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | . payload setup = 8 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | . stage-in = 0 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | . payload execution = 8928 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,665 | INFO     | . stage-out = 1 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,666 | INFO     | . log creation = 0 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,666 | INFO     | ..............................
[2026-03-04 03:43:39] 2026-03-04 08:42:34,752 | INFO     | 
[2026-03-04 03:43:39] 2026-03-04 08:42:34,752 | INFO     | job summary report
[2026-03-04 03:43:39] 2026-03-04 08:42:34,752 | INFO     | --------------------------------------------------
[2026-03-04 03:43:39] 2026-03-04 08:42:34,752 | INFO     | PanDA job id: 7037042320
[2026-03-04 03:43:39] 2026-03-04 08:42:34,753 | INFO     | task id: 48838586
[2026-03-04 03:43:39] 2026-03-04 08:42:34,753 | INFO     | errors: (none)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,753 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 03:43:39] 2026-03-04 08:42:34,753 | INFO     | pilot state: finished 
[2026-03-04 03:43:39] 2026-03-04 08:42:34,753 | INFO     | transexitcode: 0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,754 | INFO     | exeerrorcode: 0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,754 | INFO     | exeerrordiag: 
[2026-03-04 03:43:39] 2026-03-04 08:42:34,754 | INFO     | exitcode: 0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,754 | INFO     | exitmsg: OK
[2026-03-04 03:43:39] 2026-03-04 08:42:34,754 | INFO     | cpuconsumptiontime: 66371 s
[2026-03-04 03:43:39] 2026-03-04 08:42:34,754 | INFO     | nevents: 400
[2026-03-04 03:43:39] 2026-03-04 08:42:34,754 | INFO     | neventsw: 0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,755 | INFO     | pid: 29506
[2026-03-04 03:43:39] 2026-03-04 08:42:34,755 | INFO     | pgrp: 29506
[2026-03-04 03:43:39] 2026-03-04 08:42:34,755 | INFO     | corecount: 8
[2026-03-04 03:43:39] 2026-03-04 08:42:34,755 | INFO     | event service: False
[2026-03-04 03:43:39] 2026-03-04 08:42:34,755 | INFO     | sizes: {0: 2286590, 1: 2287051, 12: 2287051, 8939: 2315230, 8941: 2324228, 8944: 2324606}
[2026-03-04 03:43:39] 2026-03-04 08:42:34,755 | INFO     | --------------------------------------------------
[2026-03-04 03:43:39] 2026-03-04 08:42:34,755 | INFO     | 
[2026-03-04 03:43:39] 2026-03-04 08:42:34,756 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-04 03:43:39] 2026-03-04 08:42:34,785 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,786 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,786 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,786 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,787 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,787 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,787 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,787 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,787 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,788 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,788 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,788 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,788 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,788 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,789 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,789 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,789 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,789 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 03:43:39] 2026-03-04 08:42:34,790 | INFO     | job 7037042320 has completed (purged errors)
[2026-03-04 03:43:39] 2026-03-04 08:42:34,790 | INFO     | overall cleanup function is called
[2026-03-04 03:43:39] 2026-03-04 08:42:35,798 | INFO     | --- collectZombieJob: --- 10, [29506]
[2026-03-04 03:43:39] 2026-03-04 08:42:35,798 | INFO     | zombie collector waiting for pid 29506
[2026-03-04 03:43:39] 2026-03-04 08:42:35,799 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 03:43:39] 2026-03-04 08:42:35,799 | INFO     | collected zombie processes
[2026-03-04 03:43:39] 2026-03-04 08:42:35,799 | INFO     | will attempt to kill all subprocesses of pid=29506
[2026-03-04 03:43:39] 2026-03-04 08:42:35,886 | INFO     | process IDs to be killed: [29506] (in reverse order)
[2026-03-04 03:43:39] 2026-03-04 08:42:35,946 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 03:43:39] 2026-03-04 08:42:35,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 03:43:39] 2026-03-04 08:42:35,952 | INFO     | did not find any defunct processes belonging to 29506
[2026-03-04 03:43:39] 2026-03-04 08:42:35,956 | INFO     | did not find any defunct processes belonging to 29506
[2026-03-04 03:43:39] 2026-03-04 08:42:35,956 | INFO     | ready for new job
[2026-03-04 03:43:39] 2026-03-04 08:42:35,956 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 03:43:39] 2026-03-04 08:42:35,959 | INFO     | **************************************
[2026-03-04 03:43:39] 2026-03-04 08:42:35,959 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 03:43:39] 2026-03-04 08:42:35,959 | INFO     | **************************************
[2026-03-04 03:43:39] 2026-03-04 08:42:35,960 | INFO     | 
[2026-03-04 03:43:39] 2026-03-04 08:42:35,960 | INFO     | architecture information:
[2026-03-04 03:43:39] 2026-03-04 08:42:35,961 | INFO     | executing command: cat /etc/os-release
[2026-03-04 03:43:39] 2026-03-04 08:42:35,980 | INFO     | cat /etc/os-release:
[2026-03-04 03:43:39] NAME="CentOS Linux"
[2026-03-04 03:43:39] VERSION="7 (Core)"
[2026-03-04 03:43:39] ID="centos"
[2026-03-04 03:43:39] ID_LIKE="rhel fedora"
[2026-03-04 03:43:39] VERSION_ID="7"
[2026-03-04 03:43:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 03:43:39] ANSI_COLOR="0;31"
[2026-03-04 03:43:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 03:43:39] HOME_URL="https://www.centos.org/"
[2026-03-04 03:43:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 03:43:39] 
[2026-03-04 03:43:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 03:43:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 03:43:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 03:43:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 03:43:39] 
[2026-03-04 03:43:39] 2026-03-04 08:42:35,980 | INFO     | **************************************
[2026-03-04 03:43:39] 2026-03-04 08:42:36,484 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-04 03:43:39] 2026-03-04 08:42:36,505 | INFO     | sufficient remaining disk space (18387828736 B)
[2026-03-04 03:43:39] 2026-03-04 08:42:36,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 03:43:39] 2026-03-04 08:42:36,506 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 03:43:39] 2026-03-04 08:42:36,506 | INFO     | update_server=False
[2026-03-04 03:43:39] 2026-03-04 08:42:36,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 03:43:39] 2026-03-04 08:42:36,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 03:43:39] 2026-03-04 08:42:36,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 03:43:39] 2026-03-04 08:42:36,521 | INFO     | all data control threads have been joined
[2026-03-04 03:43:39] 2026-03-04 08:42:36,706 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 03:43:39] 2026-03-04 08:42:36,706 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 03:43:39] 2026-03-04 08:42:36,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 03:43:39] 2026-03-04 08:42:36,707 | INFO     | will abort loop
[2026-03-04 03:43:39] 2026-03-04 08:42:36,810 | INFO     | all job control threads have been joined
[2026-03-04 03:43:39] 2026-03-04 08:42:37,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 03:43:39] 2026-03-04 08:42:37,141 | INFO     | all payload control threads have been joined
[2026-03-04 03:43:39] 2026-03-04 08:42:37,511 | INFO     | [job] retrieve thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:37,512 | INFO     | [job] queue monitor thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:37,522 | INFO     | [data] control thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:37,712 | INFO     | [job] job monitor thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:37,785 | INFO     | [payload] validate_post thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:37,816 | INFO     | [data] copytool_in thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:37,816 | INFO     | [job] control thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:38,146 | INFO     | [payload] control thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:38,245 | INFO     | [job] validate thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:38,317 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:38,579 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:38,781 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:38,803 | INFO     | [payload] failed_post thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:39,007 | INFO     | [data] copytool_out thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:40,513 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:42:47,405 | INFO     | job.realtimelogging is not enabled
[2026-03-04 03:43:39] 2026-03-04 08:42:48,411 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 03:43:39] 2026-03-04 08:43:07,324 | INFO     | PID=24939 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 03:43:39] 2026-03-04 08:43:07,325 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 03:43:39] 2026-03-04 08:43:07,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 03:43:39] 2026-03-04 08:43:07,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 03:43:39] 2026-03-04 08:43:11,036 [wrapper] supervise_pilot (15 min periods counter: 11)
[2026-03-04 03:43:39] 2026-03-04 08:43:33,061 | INFO     | [monitor] cgroup control has ended
[2026-03-04 03:43:39] 2026-03-04 08:43:33,965 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140696714884928)>', '<ExcThread(monitor, started 140695973111552)>']
[2026-03-04 03:43:39] 2026-03-04 08:43:34,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 03:43:39] 2026-03-04 08:43:34,464 | INFO     | [monitor] control thread has ended
[2026-03-04 03:43:39] 2026-03-04 08:43:38,976 | INFO     | all workflow threads have been joined
[2026-03-04 03:43:39] 2026-03-04 08:43:38,977 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 03:43:39] 2026-03-04 08:43:38,978 | INFO     | traces error code: 0
[2026-03-04 03:43:39] 2026-03-04 08:43:38,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 03:43:39] 2026-03-04 08:43:39,106 [wrapper] ==== pilot stdout END ====
[2026-03-04 03:43:39] 2026-03-04 08:43:39,111 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 03:43:39] 2026-03-04 08:43:39,115 [wrapper] pilotpid: 24939
[2026-03-04 03:43:39] 2026-03-04 08:43:39,120 [wrapper] Pilot exit status: 0
[2026-03-04 03:43:39] 2026-03-04 08:43:39,139 [wrapper] pandaids: 7037042320
[2026-03-04 03:43:39] 2026-03-04 08:43:39,186 [wrapper] cleanup supervisor_pilot 24021 24940
[2026-03-04 03:43:39] 2026-03-04 08:43:39,191 [wrapper] Test setup, not cleaning
[2026-03-04 03:43:39] 2026-03-04 08:43:39,195 [wrapper] apfmon messages muted
[2026-03-04 03:43:39] 2026-03-04 08:43:39,200 [wrapper] ==== wrapper stdout END ====
[2026-03-04 03:43:39] 2026-03-04 08:43:39,205 [wrapper] ==== wrapper stderr END ====
[2026-03-04 03:43:39]  *** Error codes and diagnostics ***
[2026-03-04 03:43:39]     "exeErrorCode": 0,
[2026-03-04 03:43:39]     "exeErrorDiag": "",
[2026-03-04 03:43:39]     "pilotErrorCode": 0,
[2026-03-04 03:43:39]     "pilotErrorDiag": "",
[2026-03-04 03:43:39]  *** Listing of results directory ***
[2026-03-04 03:43:39] total 486220
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 20:58 pilot3.tar.gz
[2026-03-04 03:43:39] -rwx------ 1 boincer umatlas     36322 Mar  3 21:01 runpilot2-wrapper.sh
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 21:03 queuedata.json
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas       100 Mar  4 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 03:43:39] -rwxr-xr-x 1 boincer umatlas      7986 Mar  4 01:12 run_atlas
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas       105 Mar  4 01:12 job.xml
[2026-03-04 03:43:39] -rw-r--r-- 2 boincer umatlas 278463368 Mar  4 01:12 EVNT.48220221._000174.pool.root.1
[2026-03-04 03:43:39] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 01:12 start_atlas.sh
[2026-03-04 03:43:39] drwxrwx--x 2 boincer umatlas      4096 Mar  4 01:12 shared
[2026-03-04 03:43:39] -rw-r--r-- 2 boincer umatlas    597951 Mar  4 01:12 input.tar.gz
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas         0 Mar  4 01:12 boinc_lockfile
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas      2562 Mar  4 01:12 pandaJob.out
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas        57 Mar  4 01:12 setup.sh.local
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas    997749 Mar  4 01:13 agis_schedconf.cvmfs.json
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas   1516092 Mar  4 01:13 agis_ddmendpoints.agis.ALL.json
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas       431 Mar  4 01:13 workernode_map.json
[2026-03-04 03:43:39] drwx------ 5 boincer umatlas      4096 Mar  4 01:13 pilot3
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas      5909 Mar  4 03:39 init_data.xml
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas 212219126 Mar  4 03:41 HITS.48838586._004304.pool.root.1
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas       530 Mar  4 03:42 boinc_task_state.xml
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas        95 Mar  4 03:42 pilot_heartbeat.json
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas      1049 Mar  4 03:42 memory_monitor_summary.json
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas    377622 Mar  4 03:42 log.48838586._004304.job.log.tgz.1
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas      6397 Mar  4 03:42 heartbeat.json
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas      8192 Mar  4 03:43 boinc_mmap_file
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas        27 Mar  4 03:43 wrapper_checkpoint.txt
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas      5000 Mar  4 03:43 pilotlog.txt
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas   1254722 Mar  4 03:43 log.48838586._004304.job.log.1
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas       357 Mar  4 03:43 output.list
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas       620 Mar  4 03:43 runtime_log
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas   1648640 Mar  4 03:43 result.tar.gz
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas      9341 Mar  4 03:43 runtime_log.err
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas       660 Mar  4 03:43 GrsMDmZjqH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmw3GLDmUGgEJm.diag
[2026-03-04 03:43:39] -rw-r--r-- 1 boincer umatlas     20989 Mar  4 03:43 stderr.txt
[2026-03-04 03:43:39] HITS file was successfully produced:
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas 212219126 Mar  4 03:41 shared/HITS.pool.root.1
[2026-03-04 03:43:39]  *** Contents of shared directory: ***
[2026-03-04 03:43:39] total 481408
[2026-03-04 03:43:39] -rw-r--r-- 2 boincer umatlas 278463368 Mar  4 01:12 ATLAS.root_0
[2026-03-04 03:43:39] -rw-r--r-- 2 boincer umatlas     15845 Mar  4 01:12 start_atlas.sh
[2026-03-04 03:43:39] -rw-r--r-- 2 boincer umatlas    597951 Mar  4 01:12 input.tar.gz
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas 212219126 Mar  4 03:41 HITS.pool.root.1
[2026-03-04 03:43:39] -rw------- 1 boincer umatlas   1648640 Mar  4 03:43 result.tar.gz
03:43:41 (20915): run_atlas exited; CPU time 66310.880544
03:43:41 (20915): called boinc_finish(0)

</stderr_txt>
]]>

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