Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 09:14:11 (4200): vboxwrapper version 26210
2026-03-05 09:14:11 (4200): BOINC client version: 8.0.2
2026-03-05 09:14:13 (4200): Detected: VirtualBox VboxManage Interface (Version: 6.1.18)
2026-03-05 09:14:13 (4200): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 09:14:13 (4200): Create VM. (boinc_cb1a421229bdadf6, slot#0)
2026-03-05 09:14:14 (4200): Setting Memory Size for VM. (5900MB)
2026-03-05 09:14:14 (4200): Setting CPU Count for VM. (2)
2026-03-05 09:14:15 (4200): Setting Chipset Options for VM.
2026-03-05 09:14:15 (4200): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 09:14:15 (4200): Setting Boot Options for VM.
2026-03-05 09:14:16 (4200): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 09:14:16 (4200): Enabling VM Network Access.
2026-03-05 09:14:16 (4200): Disabling USB Support for VM.
2026-03-05 09:14:17 (4200): Disabling COM Port Support for VM.
2026-03-05 09:14:17 (4200): Disabling LPT Port Support for VM.
2026-03-05 09:14:17 (4200): Disabling Audio Support for VM.
2026-03-05 09:14:18 (4200): Disabling Clipboard Support for VM.
2026-03-05 09:14:18 (4200): Disabling Drag and Drop Support for VM.
2026-03-05 09:14:18 (4200): Adding storage controller(s) to VM.
2026-03-05 09:14:19 (4200): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 09:14:20 (4200): Adding VirtualBox Guest Additions to VM.
2026-03-05 09:14:20 (4200): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 09:14:20 (4200): forwarding host port 51434 to guest port 80
2026-03-05 09:14:21 (4200): Enabling remote desktop for VM.
2026-03-05 09:14:21 (4200): Enabling shared directory for VM.
2026-03-05 09:14:22 (4200): Starting VM using VBoxManage interface. (boinc_cb1a421229bdadf6, slot#0)
2026-03-05 09:14:30 (4200): Successfully started VM. (PID = '8300')
2026-03-05 09:14:30 (4200): Reporting VM Process ID to BOINC.
2026-03-05 09:14:30 (4200): Guest Log: BIOS: VirtualBox 6.1.18
2026-03-05 09:14:30 (4200): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 09:14:30 (4200): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 09:14:30 (4200): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 09:14:30 (4200): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 09:14:30 (4200): Detected: Web Application Enabled (http://localhost:51434)
2026-03-05 09:14:30 (4200): Detected: Remote Desktop Enabled (localhost:51435)
2026-03-05 09:14:30 (4200): Preference change detected
2026-03-05 09:14:30 (4200): Setting CPU throttle for VM. (100%)
2026-03-05 09:14:30 (4200): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 09:14:32 (4200): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 09:14:32 (4200): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 09:14:35 (4200): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 09:14:35 (4200): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 09:14:35 (4200): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 09:14:44 (4200): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 09:14:44 (4200): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-05 09:15:36 (4200): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.000265 main     Log opened 2026-03-05T09:15:35.055771000Z
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.000428 main     OS Product: Linux
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.000564 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.000650 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.000732 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.000734 main     Process ID: 1347
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.000736 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 09:15:36 (4200): Guest Log: 00:00:00.003628 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 09:15:36 (4200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 09:15:36 (4200): Guest Log: [INFO] Mounting shared directory
2026-03-05 09:15:36 (4200): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 09:15:41 (4200): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 09:15:41 (4200): Guest Log: [INFO] Detected branch: prod
2026-03-05 09:15:41 (4200): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 09:15:41 (4200): Guest Log: Copying input files
2026-03-05 09:15:45 (4200): Guest Log: Copied input files into RunAtlas.
2026-03-05 09:15:45 (4200): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2026-03-05 09:15:46 (4200): Guest Log: 00:00:10.011209 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 246 342 000ns (GuestNow=1 772 698 545 819 129 000 ns GuestLast=1 772 702 135 065 471 000 ns fSetTimeLastLoop=true )
2026-03-05 09:15:53 (4200): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 09:15:53 (4200): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 09:15:53 (4200): Guest Log: 2.6.3.0 1621 0 31540 156911 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2026-03-05 09:15:54 (4200): Guest Log: copied the webapp to /var/www
2026-03-05 09:15:54 (4200): Guest Log: ATHENA_PROC_NUMBER=2
2026-03-05 09:15:54 (4200): Guest Log: ATHENA_CORE_NUMBER=2
2026-03-05 09:15:54 (4200): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 09:15:54 (4200): Guest Log:  *** Starting ATLAS job. (PandaID=7037041010 taskID=48838577) ***
2026-03-05 09:28:39 (4200): VM state change detected. (old = 'running', new = 'paused')
2026-03-05 09:28:59 (4200): VM state change detected. (old = 'paused', new = 'running')
2026-03-05 09:45:01 (4200): VM state change detected. (old = 'running', new = 'paused')
2026-03-05 09:45:21 (4200): VM state change detected. (old = 'paused', new = 'running')
2026-03-05 10:55:20 (4200): Status Report: Elapsed Time: '6000.000000'
2026-03-05 10:55:20 (4200): Status Report: CPU Time: '11267.531250'
2026-03-05 12:35:29 (4200): Status Report: Elapsed Time: '12000.000000'
2026-03-05 12:35:29 (4200): Status Report: CPU Time: '23209.953125'
2026-03-05 12:43:42 (4200): VM state change detected. (old = 'running', new = 'paused')
2026-03-05 12:44:02 (4200): VM state change detected. (old = 'paused', new = 'running')
2026-03-05 14:16:02 (4200): Status Report: Elapsed Time: '18000.124176'
2026-03-05 14:16:02 (4200): Status Report: CPU Time: '35155.875000'
2026-03-05 15:27:17 (4200): VM state change detected. (old = 'running', new = 'paused')
2026-03-05 15:27:32 (4200): VM state change detected. (old = 'paused', new = 'running')
2026-03-05 15:56:35 (4200): Status Report: Elapsed Time: '24000.124176'
2026-03-05 15:56:35 (4200): Status Report: CPU Time: '47100.656250'
2026-03-05 17:36:42 (4200): Status Report: Elapsed Time: '30000.124176'
2026-03-05 17:36:42 (4200): Status Report: CPU Time: '59044.187500'
2026-03-05 19:16:48 (4200): Status Report: Elapsed Time: '36000.124176'
2026-03-05 19:16:48 (4200): Status Report: CPU Time: '70987.750000'
2026-03-05 20:50:28 (4200): Guest Log:  *** Job finished ***
2026-03-05 20:50:28 (4200): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:48:46,828 | INFO     | [job] control thread has finished
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:48:48,302 | INFO     | [data] queue_monitor thread has finished
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:26,823 | INFO     | [monitor] cgroup control has ended
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:28,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821922686784)>', '<ExcThread(monitor, started 139820965811968)>']
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:29,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:29,416 | INFO     | [monitor] control thread has ended
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:33,816 | INFO     | all workflow threads have been joined
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:33,817 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:33,818 | INFO     | traces error code: 0
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:33,819 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:33,944 [wrapper] ==== pilot stdout END ====
2026-03-05 20:50:28 (4200): Guest Log: 2026-03-05 19:49:33,951 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:33,956 [wrapper] pilotpid: 5992
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:33,963 [wrapper] Pilot exit status: 0
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:33,992 [wrapper] pandaids: 7037041010
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:34,028 [wrapper] cleanup supervisor_pilot  4183 5993
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:34,035 [wrapper] Test setup, not cleaning
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:34,043 [wrapper] apfmon messages muted
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:34,048 [wrapper] ==== wrapper stdout END ====
2026-03-05 20:50:29 (4200): Guest Log: 2026-03-05 19:49:34,053 [wrapper] ==== wrapper stderr END ====
2026-03-05 20:50:29 (4200): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 20:50:29 (4200): Guest Log:     "exeErrorCode": 0,
2026-03-05 20:50:29 (4200): Guest Log:     "exeErrorDiag": "",
2026-03-05 20:50:29 (4200): Guest Log:     "pilotErrorCode": 0,
2026-03-05 20:50:29 (4200): Guest Log:     "pilotErrorDiag": "",
2026-03-05 20:50:29 (4200): Guest Log:  *** Listing of results directory ***
2026-03-05 20:50:29 (4200): Guest Log: total 234456
2026-03-05 20:50:29 (4200): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  4 01:08 pilot3.tar.gz
2026-03-05 20:50:29 (4200): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  4 01:22 queuedata.json
2026-03-05 20:50:29 (4200): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  4 01:22 runpilot2-wrapper.sh
2026-03-05 20:50:29 (4200): Guest Log: -rwxr-xr-x. 1 atlas atlas      9106 Mar  5 08:15 init_data.xml
2026-03-05 20:50:29 (4200): Guest Log: -rwxr-xr-x. 1 atlas atlas    597968 Mar  5 08:15 input.tar.gz
2026-03-05 20:50:29 (4200): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  5 08:15 start_atlas.sh
2026-03-05 20:50:29 (4200): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  5 08:15 EVNT.48220197._000356.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 20:50:29 (4200): Guest Log: -rw-r--r--. 1 atlas atlas      2567 Mar  5 08:15 pandaJob.out
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas        49 Mar  5 08:15 setup.sh.local
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas    997727 Mar  5 08:16 agis_schedconf.cvmfs.json
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas       427 Mar  5 08:16 workernode_map.json
2026-03-05 20:50:29 (4200): Guest Log: drwx------. 5 atlas atlas      4096 Mar  5 08:16 pilot3
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 19:47 pilot_heartbeat.json
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas 223321317 Mar  5 19:48 HITS.48838577._008968.pool.root.1
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  5 19:48 memory_monitor_summary.json
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 19:48 agis_ddmendpoints.agis.ALL.json
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas    736744 Mar  5 19:48 log.48838577._008968.job.log.tgz.1
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas      6371 Mar  5 19:48 heartbeat.json
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas      4608 Mar  5 19:49 pilotlog.txt
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas   5711939 Mar  5 19:49 log.48838577._008968.job.log.1
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 19:49 output.list
2026-03-05 20:50:29 (4200): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 19:49 runtime_log
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas   6461440 Mar  5 19:49 result.tar.gz
2026-03-05 20:50:29 (4200): Guest Log: -rw-r--r--. 1 atlas atlas      9236 Mar  5 19:49 runtime_log.err
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas       659 Mar  5 19:49 pedKDmb7pH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtoILDmB9p2tm.diag
2026-03-05 20:50:29 (4200): Guest Log: Looking for outputfile HITS.48838577._008968.pool.root.1
2026-03-05 20:50:29 (4200): Guest Log: HITS file was successfully produced
2026-03-05 20:50:29 (4200): Guest Log: -rw-------. 1 atlas atlas 223321317 Mar  5 19:48 /home/atlas/RunAtlas/HITS.48838577._008968.pool.root.1
2026-03-05 20:50:31 (4200): Guest Log: Successfully finished the ATLAS job!
2026-03-05 20:50:31 (4200): Guest Log: Copying the results back to the shared directory!
2026-03-05 20:50:31 (4200): Guest Log:  *** Contents of shared directory: ***
2026-03-05 20:50:31 (4200): Guest Log: total 512100
2026-03-05 20:50:31 (4200): Guest Log: -rwxrwxrwx. 1 root root 293975193 Mar  5 08:14 ATLAS.root_0
2026-03-05 20:50:31 (4200): Guest Log: -rwxrwxrwx. 1 root root 223321317 Mar  5  2026 HITS.pool.root.1
2026-03-05 20:50:31 (4200): Guest Log: -rwxrwxrwx. 1 root root      9106 Mar  5 08:14 init_data.xml
2026-03-05 20:50:31 (4200): Guest Log: -rwxrwxrwx. 1 root root    597968 Mar  4 04:41 input.tar.gz
2026-03-05 20:50:31 (4200): Guest Log: -rwxrwxrwx. 1 root root   6461440 Mar  5  2026 result.tar.gz
2026-03-05 20:50:31 (4200): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  4 04:41 start_atlas.sh
2026-03-05 20:50:31 (4200): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 20:50:31 (4200): VM Completion File Detected.
2026-03-05 20:50:31 (4200): Powering off VM.
2026-03-05 20:50:33 (4200): Successfully stopped VM.
2026-03-05 20:50:33 (4200): Deregistering VM. (boinc_cb1a421229bdadf6, slot#0)
2026-03-05 20:50:33 (4200): Removing network bandwidth throttle group from VM.
2026-03-05 20:50:33 (4200): Removing VM from VirtualBox.
2026-03-05 20:50:38 (4200): called boinc_finish(0)

</stderr_txt>
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