Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
05:29:30 (2891019): wrapper (7.7.26015): starting
05:29:30 (2891019): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 05:29:30] Arguments: --nthreads 4
[2026-03-04 05:29:30] Threads: 4
[2026-03-04 05:29:30] Checking for CVMFS
[2026-03-04 05:29:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 05:29:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 05:29:31] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 05:29:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 05:29:31] 2.11.5.0 464280 9715 111004 156878 0 188 3967469 4096001 6454 130560 0 20325530 99.996 358519 1368 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-04 05:29:31] CVMFS is ok
[2026-03-04 05:29:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 05:29:31] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-04 05:29:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-04 05:29:31] Further information can be found at the LHC@home message board.
[2026-03-04 05:29:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 05:29:31] Checking for apptainer binary...
[2026-03-04 05:29:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 05:29:31] Running /usr/bin/apptainer --version
[2026-03-04 05:29:31] apptainer version 1.4.5
[2026-03-04 05:29:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 05:29:31] x32-linux3
[2026-03-04 05:29:31] apptainer works
[2026-03-04 05:29:31] Set ATHENA_PROC_NUMBER=4
[2026-03-04 05:29:31] Set ATHENA_CORE_NUMBER=4
[2026-03-04 05:29:31] Starting ATLAS job with PandaID=7036032760
[2026-03-04 05:29:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 08:46:13]  *** The last 200 lines of the pilot log: ***
[2026-03-04 08:46:13] 2026-03-04 13:46:02,267 | INFO     | this job has now completed (state=finished)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,267 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,267 | INFO     | log transfer has been attempted: DONE
[2026-03-04 08:46:13] 2026-03-04 13:46:02,267 | INFO     | job 7036032760 has finished - writing final server update
[2026-03-04 08:46:13] 2026-03-04 13:46:02,267 | INFO     | total number of processed events: 400 (read)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,293 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-7036032760/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,294 | INFO     | extracted standard info from prmon json
[2026-03-04 08:46:13] 2026-03-04 13:46:02,294 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 08:46:13] 2026-03-04 13:46:02,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 08:46:13] 2026-03-04 13:46:02,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 08:46:13] 2026-03-04 13:46:02,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 08:46:13] 2026-03-04 13:46:02,296 | INFO     | fitting pss+swap vs Time
[2026-03-04 08:46:13] 2026-03-04 13:46:02,296 | INFO     | sum of square deviations: 2229146912.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,297 | INFO     | sum of deviations: -27630838831.000004
[2026-03-04 08:46:13] 2026-03-04 13:46:02,297 | INFO     | mean x: 1772626060.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,297 | INFO     | mean y: 2377676.720207254
[2026-03-04 08:46:13] 2026-03-04 13:46:02,297 | INFO     | intersect: 21974525276.245735
[2026-03-04 08:46:13] 2026-03-04 13:46:02,298 | INFO     | chi2: 1.248265684993801
[2026-03-04 08:46:13] 2026-03-04 13:46:02,298 | INFO     | sum of square deviations: 2060343747.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | sum of deviations: -26241459338.000004
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | mean x: 1772625907.5
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | mean y: 2378932.1808510637
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | intersect: 22579335200.21985
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | chi2: 1.2464090920344555
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | current chi2=1.2464090920344555 (change=0.1487337977535369 %)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | right removable region: 187
[2026-03-04 08:46:13] 2026-03-04 13:46:02,299 | INFO     | sum of square deviations: 2060343747.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,300 | INFO     | sum of deviations: -47224147197.5
[2026-03-04 08:46:13] 2026-03-04 13:46:02,300 | INFO     | mean x: 1772626212.5
[2026-03-04 08:46:13] 2026-03-04 13:46:02,300 | INFO     | mean y: 2395074.7287234045
[2026-03-04 08:46:13] 2026-03-04 13:46:02,300 | INFO     | intersect: 40631907168.10413
[2026-03-04 08:46:13] 2026-03-04 13:46:02,300 | INFO     | chi2: 0.08238717203852093
[2026-03-04 08:46:13] 2026-03-04 13:46:02,301 | INFO     | current chi2=0.08238717203852093 (change=93.39986887175144 %)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,301 | INFO     | sum of square deviations: 1900284932.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,301 | INFO     | sum of deviations: -44599874950.99999
[2026-03-04 08:46:13] 2026-03-04 13:46:02,302 | INFO     | mean x: 1772626365.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,302 | INFO     | mean y: 2392570.655737705
[2026-03-04 08:46:13] 2026-03-04 13:46:02,302 | INFO     | intersect: 41606108351.656136
[2026-03-04 08:46:13] 2026-03-04 13:46:02,302 | INFO     | chi2: 0.08127443491407119
[2026-03-04 08:46:13] 2026-03-04 13:46:02,302 | INFO     | current chi2=0.08127443491407119 (change=1.350619394885254 %)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,302 | INFO     | left removable region: 20
[2026-03-04 08:46:13] 2026-03-04 13:46:02,302 | INFO     | sum of square deviations: 1444149868.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,303 | INFO     | sum of deviations: -36150920683.99999
[2026-03-04 08:46:13] 2026-03-04 13:46:02,303 | INFO     | mean x: 1772626487.0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,303 | INFO     | mean y: 2387596.6047904193
[2026-03-04 08:46:13] 2026-03-04 13:46:02,303 | INFO     | intersect: 44375953632.8235
[2026-03-04 08:46:13] 2026-03-04 13:46:02,303 | INFO     | chi2: 0.07600084105765893
[2026-03-04 08:46:13] 2026-03-04 13:46:02,303 | INFO     | current memory leak: -25.03 B/s (using 167 data points, chi2=0.08)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | could have reported an average CPU frequency of 3829 MHz (10 samples)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | ..............................
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . Timing measurements:
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . get job = 0 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . initial setup = 5 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . payload setup = 3 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . stage-in = 0 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . payload execution = 11754 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . stage-out = 1 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | . log creation = 0 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,304 | INFO     | ..............................
[2026-03-04 08:46:13] 2026-03-04 13:46:02,367 | INFO     | 
[2026-03-04 08:46:13] 2026-03-04 13:46:02,367 | INFO     | job summary report
[2026-03-04 08:46:13] 2026-03-04 13:46:02,367 | INFO     | --------------------------------------------------
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | PanDA job id: 7036032760
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | task id: 48850907
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | errors: (none)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | pilot state: finished 
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | transexitcode: 0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | exeerrorcode: 0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | exeerrordiag: 
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | exitcode: 0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | exitmsg: OK
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | cpuconsumptiontime: 45755 s
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | nevents: 400
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | neventsw: 0
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | pid: 2899764
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | pgrp: 2899764
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | corecount: 4
[2026-03-04 08:46:13] 2026-03-04 13:46:02,368 | INFO     | event service: False
[2026-03-04 08:46:13] 2026-03-04 13:46:02,369 | INFO     | sizes: {0: 2286788, 1: 2287192, 11: 2287192, 11762: 2316773, 11765: 2325785, 11766: 2326163}
[2026-03-04 08:46:13] 2026-03-04 13:46:02,369 | INFO     | --------------------------------------------------
[2026-03-04 08:46:13] 2026-03-04 13:46:02,369 | INFO     | 
[2026-03-04 08:46:13] 2026-03-04 13:46:02,369 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | job 7036032760 has completed (purged errors)
[2026-03-04 08:46:13] 2026-03-04 13:46:02,388 | INFO     | overall cleanup function is called
[2026-03-04 08:46:13] 2026-03-04 13:46:03,184 | INFO     | PID=2895197 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 08:46:13] 2026-03-04 13:46:03,185 | INFO     | .. there are 8 such processes running
[2026-03-04 08:46:13] 2026-03-04 13:46:03,396 | INFO     | --- collectZombieJob: --- 10, [2899764]
[2026-03-04 08:46:13] 2026-03-04 13:46:03,397 | INFO     | zombie collector waiting for pid 2899764
[2026-03-04 08:46:13] 2026-03-04 13:46:03,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 08:46:13] 2026-03-04 13:46:03,397 | INFO     | collected zombie processes
[2026-03-04 08:46:13] 2026-03-04 13:46:03,397 | INFO     | will attempt to kill all subprocesses of pid=2899764
[2026-03-04 08:46:13] 2026-03-04 13:46:03,528 | INFO     | process IDs to be killed: [2899764] (in reverse order)
[2026-03-04 08:46:13] 2026-03-04 13:46:03,581 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 08:46:13] 2026-03-04 13:46:03,582 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 08:46:13] 2026-03-04 13:46:03,590 | INFO     | did not find any defunct processes belonging to 2899764
[2026-03-04 08:46:13] 2026-03-04 13:46:03,597 | INFO     | did not find any defunct processes belonging to 2899764
[2026-03-04 08:46:13] 2026-03-04 13:46:03,597 | INFO     | ready for new job
[2026-03-04 08:46:13] 2026-03-04 13:46:03,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 08:46:13] 2026-03-04 13:46:03,599 | INFO     | **************************************
[2026-03-04 08:46:13] 2026-03-04 13:46:03,599 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 08:46:13] 2026-03-04 13:46:03,599 | INFO     | **************************************
[2026-03-04 08:46:13] 2026-03-04 13:46:03,599 | INFO     | 
[2026-03-04 08:46:13] 2026-03-04 13:46:03,622 | INFO     | architecture information:
[2026-03-04 08:46:13] 2026-03-04 13:46:03,623 | INFO     | executing command: cat /etc/os-release
[2026-03-04 08:46:13] 2026-03-04 13:46:03,636 | INFO     | cat /etc/os-release:
[2026-03-04 08:46:13] NAME="CentOS Linux"
[2026-03-04 08:46:13] VERSION="7 (Core)"
[2026-03-04 08:46:13] ID="centos"
[2026-03-04 08:46:13] ID_LIKE="rhel fedora"
[2026-03-04 08:46:13] VERSION_ID="7"
[2026-03-04 08:46:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 08:46:13] ANSI_COLOR="0;31"
[2026-03-04 08:46:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 08:46:13] HOME_URL="https://www.centos.org/"
[2026-03-04 08:46:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 08:46:13] 
[2026-03-04 08:46:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 08:46:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 08:46:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 08:46:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 08:46:13] 
[2026-03-04 08:46:13] 2026-03-04 13:46:03,637 | INFO     | **************************************
[2026-03-04 08:46:13] 2026-03-04 13:46:03,692 | WARNING  | process 2899764 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 08:46:13] 2026-03-04 13:46:03,793 | INFO     | using path: /var/lib/boinc-client/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 08:46:13] 2026-03-04 13:46:03,928 | INFO     | number of running child processes to parent process 2899764: 1
[2026-03-04 08:46:13] 2026-03-04 13:46:03,928 | INFO     | maximum number of monitored processes: 6
[2026-03-04 08:46:13] 2026-03-04 13:46:03,928 | INFO     | aborting job monitoring since job object (job id=7036032760) has expired
[2026-03-04 08:46:13] 2026-03-04 13:46:04,140 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-03-04 08:46:13] 2026-03-04 13:46:04,154 | INFO     | sufficient remaining disk space (388066443264 B)
[2026-03-04 08:46:13] 2026-03-04 13:46:04,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | INFO     | update_server=False
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-04 08:46:13] 2026-03-04 13:46:04,155 | INFO     | will abort loop
[2026-03-04 08:46:13] 2026-03-04 13:46:04,156 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 08:46:13] 2026-03-04 13:46:04,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 08:46:13] 2026-03-04 13:46:04,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 08:46:13] 2026-03-04 13:46:04,226 | INFO     | all payload control threads have been joined
[2026-03-04 08:46:13] 2026-03-04 13:46:04,291 | INFO     | all data control threads have been joined
[2026-03-04 08:46:13] 2026-03-04 13:46:04,612 | INFO     | [monitor] cgroup control has ended
[2026-03-04 08:46:13] 2026-03-04 13:46:05,155 | INFO     | [job] retrieve thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,160 | INFO     | [job] job monitor thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,161 | INFO     | [job] queue monitor thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,230 | INFO     | [payload] control thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,252 | INFO     | [payload] failed_post thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,298 | INFO     | [data] control thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,396 | INFO     | all job control threads have been joined
[2026-03-04 08:46:13] 2026-03-04 13:46:05,765 | INFO     | [job] validate thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,768 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:05,837 | INFO     | [payload] validate_post thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:06,108 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:06,160 | INFO     | [data] copytool_out thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:06,236 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:06,400 | INFO     | [job] control thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:06,404 | INFO     | [data] copytool_in thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:06,520 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:08,160 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 08:46:13] 2026-03-04 13:46:08,772 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505120876352)>', '<ExcThread(monitor, started 140504545093376)>']
[2026-03-04 08:46:13] 2026-03-04 13:46:09,178 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 08:46:13] 2026-03-04 13:46:09,178 | INFO     | [monitor] control thread has ended
[2026-03-04 08:46:13] 2026-03-04 13:46:13,796 | INFO     | all workflow threads have been joined
[2026-03-04 08:46:13] 2026-03-04 13:46:13,797 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 08:46:13] 2026-03-04 13:46:13,797 | INFO     | traces error code: 0
[2026-03-04 08:46:13] 2026-03-04 13:46:13,797 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 08:46:13] 2026-03-04 13:46:13,879 [wrapper] ==== pilot stdout END ====
[2026-03-04 08:46:13] 2026-03-04 13:46:13,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 08:46:13] 2026-03-04 13:46:13,884 [wrapper] pilotpid: 2895197
[2026-03-04 08:46:13] 2026-03-04 13:46:13,886 [wrapper] Pilot exit status: 0
[2026-03-04 08:46:13] 2026-03-04 13:46:13,894 [wrapper] pandaids: 7036032760
[2026-03-04 08:46:13] 2026-03-04 13:46:13,926 [wrapper] cleanup supervisor_pilot 3014816 2895198
[2026-03-04 08:46:13] 2026-03-04 13:46:13,929 [wrapper] Test setup, not cleaning
[2026-03-04 08:46:13] 2026-03-04 13:46:13,931 [wrapper] apfmon messages muted
[2026-03-04 08:46:13] 2026-03-04 13:46:13,933 [wrapper] ==== wrapper stdout END ====
[2026-03-04 08:46:13] 2026-03-04 13:46:13,935 [wrapper] ==== wrapper stderr END ====
[2026-03-04 08:46:13]  *** Error codes and diagnostics ***
[2026-03-04 08:46:13]     "exeErrorCode": 0,
[2026-03-04 08:46:13]     "exeErrorDiag": "",
[2026-03-04 08:46:13]     "pilotErrorCode": 0,
[2026-03-04 08:46:13]     "pilotErrorDiag": "",
[2026-03-04 08:46:13]  *** Listing of results directory ***
[2026-03-04 08:46:13] total 441448
[2026-03-04 08:46:13] -rwx------ 1 boinc boinc     36322 Mar  2 10:04 runpilot2-wrapper.sh
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc      5111 Mar  2 10:04 queuedata.json
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc    584627 Mar  2 10:05 pilot3.tar.gz
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc       100 Mar  4 05:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 08:46:13] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 05:29 run_atlas
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc       105 Mar  4 05:29 job.xml
[2026-03-04 08:46:13] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:29 start_atlas.sh
[2026-03-04 08:46:13] drwxrwx--x 2 boinc boinc      4096 Mar  4 05:29 shared
[2026-03-04 08:46:13] -rw-r--r-- 2 boinc boinc    597970 Mar  4 05:29 input.tar.gz
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc      9156 Mar  4 05:29 init_data.xml
[2026-03-04 08:46:13] -rw-r--r-- 2 boinc boinc 240573899 Mar  4 05:29 EVNT.48459429._000002.pool.root.1
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc         0 Mar  4 05:29 boinc_setup_complete
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc         0 Mar  4 05:29 boinc_lockfile
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc      2626 Mar  4 05:29 pandaJob.out
[2026-03-04 08:46:13] -rw------- 1 boinc boinc    997376 Mar  4 05:29 agis_schedconf.cvmfs.json
[2026-03-04 08:46:13] -rw------- 1 boinc boinc       419 Mar  4 05:29 workernode_map.json
[2026-03-04 08:46:13] drwx------ 5 boinc boinc      4096 Mar  4 05:29 pilot3
[2026-03-04 08:46:13] -rw------- 1 boinc boinc 203434276 Mar  4 08:45 HITS.48850907._000040.pool.root.1
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc       530 Mar  4 08:45 boinc_task_state.xml
[2026-03-04 08:46:13] -rw------- 1 boinc boinc        95 Mar  4 08:45 pilot_heartbeat.json
[2026-03-04 08:46:13] -rw------- 1 boinc boinc      1026 Mar  4 08:45 memory_monitor_summary.json
[2026-03-04 08:46:13] -rw------- 1 boinc boinc   1516092 Mar  4 08:46 agis_ddmendpoints.agis.ALL.json
[2026-03-04 08:46:13] -rw------- 1 boinc boinc    365248 Mar  4 08:46 log.48850907._000040.job.log.tgz.1
[2026-03-04 08:46:13] -rw------- 1 boinc boinc      6286 Mar  4 08:46 heartbeat.json
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc      8192 Mar  4 08:46 boinc_mmap_file
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc        28 Mar  4 08:46 wrapper_checkpoint.txt
[2026-03-04 08:46:13] -rw------- 1 boinc boinc      5084 Mar  4 08:46 pilotlog.txt
[2026-03-04 08:46:13] -rw------- 1 boinc boinc   1687395 Mar  4 08:46 log.48850907._000040.job.log.1
[2026-03-04 08:46:13] -rw------- 1 boinc boinc       357 Mar  4 08:46 output.list
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc       620 Mar  4 08:46 runtime_log
[2026-03-04 08:46:13] -rw------- 1 boinc boinc   2068480 Mar  4 08:46 result.tar.gz
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc      8892 Mar  4 08:46 runtime_log.err
[2026-03-04 08:46:13] -rw------- 1 boinc boinc       645 Mar  4 08:46 lImLDmG0JH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmqtBLDmjUPynm.diag
[2026-03-04 08:46:13] -rw-r--r-- 1 boinc boinc     21372 Mar  4 08:46 stderr.txt
[2026-03-04 08:46:14] HITS file was successfully produced:
[2026-03-04 08:46:14] -rw------- 1 boinc boinc 203434276 Mar  4 08:45 shared/HITS.pool.root.1
[2026-03-04 08:46:14]  *** Contents of shared directory: ***
[2026-03-04 08:46:14] total 436228
[2026-03-04 08:46:14] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:29 start_atlas.sh
[2026-03-04 08:46:14] -rw-r--r-- 2 boinc boinc    597970 Mar  4 05:29 input.tar.gz
[2026-03-04 08:46:14] -rw-r--r-- 2 boinc boinc 240573899 Mar  4 05:29 ATLAS.root_0
[2026-03-04 08:46:14] -rw------- 1 boinc boinc 203434276 Mar  4 08:45 HITS.pool.root.1
[2026-03-04 08:46:14] -rw------- 1 boinc boinc   2068480 Mar  4 08:46 result.tar.gz
08:46:15 (2891019): run_atlas exited; CPU time 45900.140626
08:46:15 (2891019): called boinc_finish(0)

</stderr_txt>
]]>

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