Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:21:23 (3063991): wrapper (7.7.26015): starting
20:21:23 (3063991): wrapper: running run_atlas (--nthreads 9)
[2026-03-03 20:21:23] Arguments: --nthreads 9
[2026-03-03 20:21:23] Threads: 9
[2026-03-03 20:21:23] Checking for CVMFS
[2026-03-03 20:21:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 20:21:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 20:21:24] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 20:21:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 20:21:25] 2.13.3.0 7976 98604 424212 156864 2 19 31377104 40960001 9844 16776704 0 102629294 99.738 143798445 31146 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 20:21:25] CVMFS is ok
[2026-03-03 20:21:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 20:21:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 20:21:25] Further information can be found at the LHC@home message board.
[2026-03-03 20:21:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 20:21:25] Checking for apptainer binary...
[2026-03-03 20:21:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 20:21:25] Running /usr/bin/apptainer --version
[2026-03-03 20:21:26] apptainer version 1.4.5-2.el9
[2026-03-03 20:21:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 20:21:26] c-211-13.aglt2.org
[2026-03-03 20:21:26] apptainer works
[2026-03-03 20:21:26] Set ATHENA_PROC_NUMBER=9
[2026-03-03 20:21:26] Set ATHENA_CORE_NUMBER=9
[2026-03-03 20:21:26] Starting ATLAS job with PandaID=7036802566
[2026-03-03 20:21:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 01:21:47]  *** The last 200 lines of the pilot log: ***
[2026-03-04 01:21:47] 2026-03-04 05:38:57,550 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 01:21:47] 2026-03-04 05:38:57,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 01:21:47] 2026-03-04 05:38:57,575 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 01:21:47] 2026-03-04 05:38:57,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 01:21:47] 2026-03-04 05:38:57,666 | INFO     | fitting pss+swap vs Time
[2026-03-04 01:21:47] 2026-03-04 05:38:57,666 | INFO     | sum of square deviations: 4963306834.964249
[2026-03-04 01:21:47] 2026-03-04 05:38:57,984 | INFO     | sum of deviations: -165641909445.75
[2026-03-04 01:21:47] 2026-03-04 05:38:57,984 | INFO     | mean x: 1772595030.1785715
[2026-03-04 01:21:47] 2026-03-04 05:38:57,984 | INFO     | mean y: 2608117.527777778
[2026-03-04 01:21:47] 2026-03-04 05:38:57,984 | INFO     | intersect: 59159947213.396996
[2026-03-04 01:21:47] 2026-03-04 05:38:57,985 | INFO     | chi2: 6.736558708334311
[2026-03-04 01:21:47] 2026-03-04 05:38:57,985 | INFO     | sum of square deviations: 4673778871.368405
[2026-03-04 01:21:47] 2026-03-04 05:38:57,987 | INFO     | sum of deviations: -79008442180.57893
[2026-03-04 01:21:47] 2026-03-04 05:38:58,059 | INFO     | mean x: 1772594877.6842105
[2026-03-04 01:21:47] 2026-03-04 05:38:58,060 | INFO     | mean y: 2653753.902834008
[2026-03-04 01:21:47] 2026-03-04 05:38:58,060 | INFO     | intersect: 29967691415.62238
[2026-03-04 01:21:47] 2026-03-04 05:38:58,060 | INFO     | chi2: 2.830430593872408
[2026-03-04 01:21:47] 2026-03-04 05:38:58,060 | INFO     | current chi2=2.830430593872408 (change=57.984028397605044 %)
[2026-03-04 01:21:47] 2026-03-04 05:38:58,061 | INFO     | sum of square deviations: 4395739375.256199
[2026-03-04 01:21:47] 2026-03-04 05:38:58,062 | INFO     | sum of deviations: -58956448075.13223
[2026-03-04 01:21:47] 2026-03-04 05:38:58,063 | INFO     | mean x: 1772594725.1900826
[2026-03-04 01:21:47] 2026-03-04 05:38:58,063 | INFO     | mean y: 2664592.111570248
[2026-03-04 01:21:47] 2026-03-04 05:38:58,463 | INFO     | intersect: 23777024250.964508
[2026-03-04 01:21:47] 2026-03-04 05:38:58,464 | INFO     | chi2: 1.9873093661991903
[2026-03-04 01:21:47] 2026-03-04 05:38:58,464 | INFO     | current chi2=1.9873093661991903 (change=29.78773722621882 %)
[2026-03-04 01:21:47] 2026-03-04 05:38:58,464 | INFO     | sum of square deviations: 4128866956.329102
[2026-03-04 01:21:47] 2026-03-04 05:38:58,466 | INFO     | sum of deviations: -57019483565.569626
[2026-03-04 01:21:47] 2026-03-04 05:38:58,466 | INFO     | mean x: 1772594572.670886
[2026-03-04 01:21:47] 2026-03-04 05:38:58,466 | INFO     | mean y: 2665699.23628692
[2026-03-04 01:21:47] 2026-03-04 05:38:58,467 | INFO     | intersect: 24482124149.669643
[2026-03-04 01:21:47] 2026-03-04 05:38:58,595 | INFO     | chi2: 1.9833336632265408
[2026-03-04 01:21:47] 2026-03-04 05:38:58,595 | INFO     | current chi2=1.9833336632265408 (change=0.20005455820163418 %)
[2026-03-04 01:21:47] 2026-03-04 05:38:58,596 | INFO     | right removable region: 236
[2026-03-04 01:21:47] 2026-03-04 05:38:58,596 | INFO     | sum of square deviations: 4673705062.615393
[2026-03-04 01:21:47] 2026-03-04 05:38:58,598 | INFO     | sum of deviations: -205590719252.15387
[2026-03-04 01:21:47] 2026-03-04 05:38:58,598 | INFO     | mean x: 1772595182.6923077
[2026-03-04 01:21:47] 2026-03-04 05:38:58,599 | INFO     | mean y: 2628963.4453441296
[2026-03-04 01:21:47] 2026-03-04 05:38:58,861 | INFO     | intersect: 77976979862.83246
[2026-03-04 01:21:47] 2026-03-04 05:38:58,862 | INFO     | chi2: 5.292926104433865
[2026-03-04 01:21:47] 2026-03-04 05:38:58,862 | INFO     | current chi2=5.292926104433865 (change=21.429822946757934 %)
[2026-03-04 01:21:47] 2026-03-04 05:38:58,862 | INFO     | left removable region: 10
[2026-03-04 01:21:47] 2026-03-04 05:38:58,863 | INFO     | sum of square deviations: 3580256099.433624
[2026-03-04 01:21:47] 2026-03-04 05:38:58,864 | INFO     | sum of deviations: -93342165656.82303
[2026-03-04 01:21:47] 2026-03-04 05:38:58,864 | INFO     | mean x: 1772594847.1946902
[2026-03-04 01:21:47] 2026-03-04 05:38:58,865 | INFO     | mean y: 2687651.8141592923
[2026-03-04 01:21:47] 2026-03-04 05:38:58,865 | INFO     | intersect: 46216655947.39284
[2026-03-04 01:21:47] 2026-03-04 05:38:58,861 | INFO     | monitor loop #892: job 0:7036802566 is in state 'finished'
[2026-03-04 01:21:47] 2026-03-04 05:38:58,951 | INFO     | chi2: 0.38425047297665005
[2026-03-04 01:21:47] 2026-03-04 05:38:58,987 | INFO     | current memory leak: -26.07 B/s (using 226 data points, chi2=0.38)
[2026-03-04 01:21:47] 2026-03-04 05:38:59,004 | INFO     | could have reported an average CPU frequency of 2652 MHz (12 samples)
[2026-03-04 01:21:47] 2026-03-04 05:38:59,005 | INFO     | ..............................
[2026-03-04 01:21:47] 2026-03-04 05:38:59,005 | INFO     | . Timing measurements:
[2026-03-04 01:21:47] 2026-03-04 05:38:59,005 | INFO     | . get job = 0 s
[2026-03-04 01:21:47] 2026-03-04 05:38:59,005 | INFO     | . initial setup = 20 s
[2026-03-04 01:21:47] 2026-03-04 05:38:59,005 | INFO     | . payload setup = 18 s
[2026-03-04 01:21:47] 2026-03-04 05:38:59,005 | INFO     | . stage-in = 0 s
[2026-03-04 01:21:47] 2026-03-04 05:38:59,006 | INFO     | . payload execution = 15355 s
[2026-03-04 01:21:47] 2026-03-04 05:38:59,006 | INFO     | . stage-out = 12 s
[2026-03-04 01:21:47] 2026-03-04 05:38:59,006 | INFO     | . log creation = 0 s
[2026-03-04 01:21:47] 2026-03-04 05:38:59,006 | INFO     | ..............................
[2026-03-04 01:21:47] 2026-03-04 05:38:58,978 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 01:21:47] 2026-03-04 05:39:02,196 | INFO     | 
[2026-03-04 01:21:47] 2026-03-04 05:39:02,196 | INFO     | job summary report
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | --------------------------------------------------
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | PanDA job id: 7036802566
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | task id: 48838577
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | errors: (none)
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | pilot state: finished 
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | transexitcode: 0
[2026-03-04 01:21:47] 2026-03-04 05:39:02,197 | INFO     | exeerrorcode: 0
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | exeerrordiag: 
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | exitcode: 0
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | exitmsg: OK
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | cpuconsumptiontime: 56181 s
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | nevents: 400
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | neventsw: 0
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | pid: 3073426
[2026-03-04 01:21:47] 2026-03-04 05:39:02,198 | INFO     | pgrp: 3073426
[2026-03-04 01:21:47] 2026-03-04 05:39:02,199 | INFO     | corecount: 9
[2026-03-04 01:21:47] 2026-03-04 05:39:02,199 | INFO     | event service: False
[2026-03-04 01:21:47] 2026-03-04 05:39:02,199 | INFO     | sizes: {0: 2286645, 1: 2287106, 12: 2287106, 15378: 2318042, 15379: 2318041, 15393: 2327123, 15395: 2327307, 15401: 2327501}
[2026-03-04 01:21:47] 2026-03-04 05:39:02,199 | INFO     | --------------------------------------------------
[2026-03-04 01:21:47] 2026-03-04 05:39:02,199 | INFO     | 
[2026-03-04 01:21:47] 2026-03-04 05:39:02,199 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-04 01:21:47] 2026-03-04 05:39:02,640 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 01:21:47] 2026-03-04 05:39:02,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,643 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 01:21:47] 2026-03-04 05:39:02,643 | INFO     | job 7036802566 has completed (purged errors)
[2026-03-04 01:21:47] 2026-03-04 05:39:02,643 | INFO     | overall cleanup function is called
[2026-03-04 01:21:47] 2026-03-04 05:39:02,892 | INFO     | PID=3068081 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 01:21:47] 2026-03-04 05:39:02,892 | INFO     | .. there are 19 such processes running
[2026-03-04 01:21:47] 2026-03-04 05:39:03,749 | INFO     | --- collectZombieJob: --- 10, [3073426]
[2026-03-04 01:21:47] 2026-03-04 05:39:03,749 | INFO     | zombie collector waiting for pid 3073426
[2026-03-04 01:21:47] 2026-03-04 05:39:03,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 01:21:47] 2026-03-04 05:39:03,750 | INFO     | collected zombie processes
[2026-03-04 01:21:47] 2026-03-04 05:39:03,750 | INFO     | will attempt to kill all subprocesses of pid=3073426
[2026-03-04 01:21:47] 2026-03-04 05:39:10,644 | INFO     | process IDs to be killed: [3073426] (in reverse order)
[2026-03-04 01:21:47] 2026-03-04 05:39:10,996 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 01:21:47] 2026-03-04 05:39:10,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 01:21:47] 2026-03-04 05:39:11,022 | INFO     | did not find any defunct processes belonging to 3073426
[2026-03-04 01:21:47] 2026-03-04 05:39:11,045 | INFO     | did not find any defunct processes belonging to 3073426
[2026-03-04 01:21:47] 2026-03-04 05:39:11,046 | INFO     | ready for new job
[2026-03-04 01:21:47] 2026-03-04 05:39:11,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 01:21:47] 2026-03-04 05:39:11,048 | INFO     | **************************************
[2026-03-04 01:21:47] 2026-03-04 05:39:11,052 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 01:21:47] 2026-03-04 05:39:11,052 | INFO     | **************************************
[2026-03-04 01:21:47] 2026-03-04 05:39:11,052 | INFO     | 
[2026-03-04 01:21:47] 2026-03-04 05:39:11,055 | INFO     | architecture information:
[2026-03-04 01:21:47] 2026-03-04 05:39:11,059 | INFO     | executing command: cat /etc/os-release
[2026-03-04 01:21:47] 2026-03-04 05:39:11,469 | INFO     | cat /etc/os-release:
[2026-03-04 01:21:47] NAME="CentOS Linux"
[2026-03-04 01:21:47] VERSION="7 (Core)"
[2026-03-04 01:21:47] ID="centos"
[2026-03-04 01:21:47] ID_LIKE="rhel fedora"
[2026-03-04 01:21:47] VERSION_ID="7"
[2026-03-04 01:21:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 01:21:47] ANSI_COLOR="0;31"
[2026-03-04 01:21:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 01:21:47] HOME_URL="https://www.centos.org/"
[2026-03-04 01:21:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 01:21:47] 
[2026-03-04 01:21:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 01:21:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 01:21:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 01:21:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 01:21:47] 
[2026-03-04 01:21:47] 2026-03-04 05:39:11,470 | INFO     | **************************************
[2026-03-04 01:21:47] 2026-03-04 05:39:11,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-04 01:21:47] 2026-03-04 05:39:12,098 | INFO     | sufficient remaining disk space (61042851840 B)
[2026-03-04 01:21:47] 2026-03-04 05:39:12,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 01:21:47] 2026-03-04 05:39:12,098 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 01:21:47] 2026-03-04 05:39:12,098 | INFO     | update_server=False
[2026-03-04 01:21:47] 2026-03-04 05:39:12,099 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 01:21:47] 2026-03-04 05:39:12,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 01:21:47] 2026-03-04 05:39:12,102 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 01:21:47] 2026-03-04 05:39:12,292 | INFO     | all payload control threads have been joined
[2026-03-04 01:21:47] 2026-03-04 05:39:12,521 | INFO     | all data control threads have been joined
[2026-03-04 01:21:47] 2026-03-04 05:39:12,575 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 01:21:47] 2026-03-04 05:39:12,575 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 01:21:47] 2026-03-04 05:39:12,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 01:21:47] 2026-03-04 05:39:12,576 | INFO     | will abort loop
[2026-03-04 01:21:47] 2026-03-04 05:39:13,058 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 01:21:47] 2026-03-04 05:39:13,104 | INFO     | [job] retrieve thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:13,124 | INFO     | [job] queue monitor thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:13,298 | INFO     | [payload] control thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:13,546 | INFO     | [data] control thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:13,579 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:13,585 | INFO     | [job] job monitor thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:13,852 | INFO     | [payload] validate_post thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:14,028 | INFO     | all job control threads have been joined
[2026-03-04 01:21:47] 2026-03-04 05:39:14,149 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:14,152 | INFO     | [job] validate thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:14,153 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:14,153 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:14,157 | INFO     | [data] copytool_in thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:14,322 | INFO     | [payload] failed_post thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:15,080 | INFO     | [job] control thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:15,126 | INFO     | [data] copytool_out thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:16,136 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 01:21:47] 2026-03-04 05:39:38,347 | INFO     | PID=3068081 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 01:21:47] 2026-03-04 05:39:38,348 | INFO     | .. there are 19 such processes running
[2026-03-04 01:21:47] 2026-03-04 05:39:38,349 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 01:21:47] 2026-03-04 05:39:38,349 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 01:21:47] 2026-03-04 05:39:38,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 01:21:47] 2026-03-04 05:39:38,948 | INFO     | [monitor] cgroup control has ended
[2026-03-04 01:21:47] 2026-03-04 05:39:39,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747204966208)>', '<ExcThread(monitor, started 139746718230272)>']
[2026-03-04 01:21:47] 2026-03-04 05:39:39,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 01:21:47] 2026-03-04 05:39:39,359 | INFO     | [monitor] control thread has ended
[2026-03-04 01:21:47] 2026-03-04 05:39:44,372 | INFO     | all workflow threads have been joined
[2026-03-04 01:21:47] 2026-03-04 05:39:44,372 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 01:21:47] 2026-03-04 05:39:44,373 | INFO     | traces error code: 0
[2026-03-04 01:21:47] 2026-03-04 05:39:44,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 01:21:47] 2026-03-04 05:39:46,432 [wrapper] ==== pilot stdout END ====
[2026-03-04 01:21:47] 2026-03-04 05:39:46,454 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 01:21:47] 2026-03-04 05:39:46,548 [wrapper] pilotpid: 3068081
[2026-03-04 01:21:47] 2026-03-04 05:39:46,569 [wrapper] Pilot exit status: 0
[2026-03-04 01:21:47] 2026-03-04 05:39:46,665 [wrapper] pandaids: 7036802566
[2026-03-04 01:21:47] 2026-03-04 05:39:46,821 [wrapper] cleanup supervisor_pilot 3605791 3068082
[2026-03-04 01:21:47] 2026-03-04 05:39:46,836 [wrapper] Test setup, not cleaning
[2026-03-04 01:21:47] 2026-03-04 05:39:46,841 [wrapper] apfmon messages muted
[2026-03-04 01:21:47] 2026-03-04 05:39:46,843 [wrapper] ==== wrapper stdout END ====
[2026-03-04 01:21:47] 2026-03-04 05:39:46,872 [wrapper] ==== wrapper stderr END ====
[2026-03-04 01:21:47]  *** Error codes and diagnostics ***
[2026-03-04 01:21:47]     "exeErrorCode": 0,
[2026-03-04 01:21:47]     "exeErrorDiag": "",
[2026-03-04 01:21:47]     "pilotErrorCode": 0,
[2026-03-04 01:21:47]     "pilotErrorDiag": "",
[2026-03-04 01:21:47]  *** Listing of results directory ***
[2026-03-04 01:21:48] total 509484
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 18:05 pilot3.tar.gz
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 18:06 queuedata.json
[2026-03-04 01:21:48] -rwx------. 1 boincer umatlas     36322 Mar  3 18:06 runpilot2-wrapper.sh
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas       100 Mar  3 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 01:21:48] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 20:21 run_atlas
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas       105 Mar  3 20:21 job.xml
[2026-03-04 01:21:48] -rw-r--r--. 2 boincer umatlas 287799959 Mar  3 20:21 EVNT.48220197._000284.pool.root.1
[2026-03-04 01:21:48] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 20:21 shared
[2026-03-04 01:21:48] -rw-r--r--. 2 boincer umatlas    597973 Mar  3 20:21 input.tar.gz
[2026-03-04 01:21:48] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 20:21 start_atlas.sh
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas         0 Mar  3 20:21 boinc_lockfile
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas      2567 Mar  3 20:21 pandaJob.out
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas        57 Mar  3 20:21 setup.sh.local
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas    998484 Mar  3 20:21 agis_schedconf.cvmfs.json
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas       442 Mar  3 20:22 workernode_map.json
[2026-03-04 01:21:48] drwx------. 5 boincer umatlas      4096 Mar  3 20:22 pilot3
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas 225299609 Mar  4 00:32 HITS.48838577._007156.pool.root.1
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas       530 Mar  4 00:32 boinc_task_state.xml
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas      1038 Mar  4 00:38 memory_monitor_summary.json
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas   1516092 Mar  4 00:38 agis_ddmendpoints.agis.ALL.json
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas    464493 Mar  4 00:38 log.48838577._007156.job.log.tgz.1
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas      6394 Mar  4 00:38 heartbeat.json
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas        95 Mar  4 00:39 pilot_heartbeat.json
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas      5006 Mar  4 00:39 pilotlog.txt
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas   1872644 Mar  4 00:39 log.48838577._007156.job.log.1
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas       357 Mar  4 00:39 output.list
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas       620 Mar  4 00:39 runtime_log
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas   2355200 Mar  4 00:39 result.tar.gz
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas       656 Mar  4 00:39 uMVMDm9znH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxEILDmpzG8tm.diag
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas      9342 Mar  4 00:39 runtime_log.err
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas        28 Mar  4 01:21 wrapper_checkpoint.txt
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas      6614 Mar  4 01:21 init_data.xml
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas      8192 Mar  4 01:21 boinc_mmap_file
[2026-03-04 01:21:48] -rw-r--r--. 1 boincer umatlas     21253 Mar  4 01:21 stderr.txt
[2026-03-04 01:21:48] HITS file was successfully produced:
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas 225299609 Mar  4 00:32 shared/HITS.pool.root.1
[2026-03-04 01:21:48]  *** Contents of shared directory: ***
[2026-03-04 01:21:48] total 503984
[2026-03-04 01:21:48] -rw-r--r--. 2 boincer umatlas 287799959 Mar  3 20:21 ATLAS.root_0
[2026-03-04 01:21:48] -rw-r--r--. 2 boincer umatlas    597973 Mar  3 20:21 input.tar.gz
[2026-03-04 01:21:48] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 20:21 start_atlas.sh
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas 225299609 Mar  4 00:32 HITS.pool.root.1
[2026-03-04 01:21:48] -rw-------. 1 boincer umatlas   2355200 Mar  4 00:39 result.tar.gz
01:21:50 (3063991): run_atlas exited; CPU time 56776.127529
01:21:50 (3063991): called boinc_finish(0)

</stderr_txt>
]]>

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