Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:19:43 (863052): wrapper (7.7.26015): starting
20:19:43 (863052): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 20:19:43] Arguments: --nthreads 8
[2026-03-03 20:19:43] Threads: 8
[2026-03-03 20:19:43] Checking for CVMFS
[2026-03-03 20:19:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 20:19:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 20:19:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 20:19:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 20:19:45] 2.13.3.0 8759 98471 272804 156864 2 135 23842120 40960001 24940 16776704 0 819252466 99.686 652043401 43864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 20:19:45] CVMFS is ok
[2026-03-03 20:19:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 20:19:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 20:19:45] Further information can be found at the LHC@home message board.
[2026-03-03 20:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 20:19:45] Checking for apptainer binary...
[2026-03-03 20:19:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 20:19:45] Running /usr/bin/apptainer --version
[2026-03-03 20:19:45] apptainer version 1.4.5-2.el9
[2026-03-03 20:19:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 20:19:46] c-208-39.aglt2.org
[2026-03-03 20:19:46] apptainer works
[2026-03-03 20:19:46] Set ATHENA_PROC_NUMBER=8
[2026-03-03 20:19:46] Set ATHENA_CORE_NUMBER=8
[2026-03-03 20:19:46] Starting ATLAS job with PandaID=7036778463
[2026-03-03 20:19:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 21:28:37]  *** The last 200 lines of the pilot log: ***
[2026-03-03 21:28:37]  is_tar=False
[2026-03-03 21:28:37]  lfn=log.48838577._006641.job.log.tgz.1
[2026-03-03 21:28:37]  mtime=0
[2026-03-03 21:28:37]  protocol_id=None
[2026-03-03 21:28:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 21:28:37]  replicas=None
[2026-03-03 21:28:37]  scope=mc23_13p6TeV
[2026-03-03 21:28:37]  status=None
[2026-03-03 21:28:37]  status_code=0
[2026-03-03 21:28:37]  storage_token=
[2026-03-03 21:28:37]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-7036778463/log.48838577._006641.job.log.tgz.1
[2026-03-03 21:28:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/1e/log.48838577._006641.job.log.tgz.1
[2026-03-03 21:28:37]  workdir=None
[2026-03-03 21:28:37] ]
[2026-03-03 21:28:37] 2026-03-04 02:27:59,831 | INFO     | transferring file log.48838577._006641.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-7036778463/log.48838577._006641.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-03 21:28:37] 2026-03-04 02:27:59,832 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-7036778463/log.48838577._006641.job.log.tgz.1 /tmp/boinchome/slots/5/log.48838577._006641.job
[2026-03-03 21:28:37] 2026-03-04 02:27:59,850 | INFO     | adding to output.list: log.48838577._006641.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9e/1e/log.48838577._006641.job.log.tg
[2026-03-03 21:28:37] 2026-03-04 02:27:59,850 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 21:28:37] 2026-03-04 02:27:59,851 | INFO     | summary of transferred files:
[2026-03-03 21:28:37] 2026-03-04 02:27:59,851 | INFO     |  -- lfn=log.48838577._006641.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 21:28:37] 2026-03-04 02:27:59,851 | INFO     | stage-out finished correctly
[2026-03-03 21:28:37] 2026-03-04 02:28:01,453 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 21:28:37] 2026-03-04 02:28:01,603 | WARNING  | process 881249 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 21:28:37] 2026-03-04 02:28:01,603 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7036778463/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 21:28:37] 2026-03-04 02:28:01,774 | INFO     | time since job start (4011s) is within the limit (349056.0s)
[2026-03-03 21:28:37] 2026-03-04 02:28:01,990 | INFO     | number of running child processes to parent process 881249: 1
[2026-03-03 21:28:37] 2026-03-04 02:28:01,991 | INFO     | maximum number of monitored processes: 6
[2026-03-03 21:28:37] 2026-03-04 02:28:03,780 | INFO     | time since job start (4013s) is within the limit (349056.0s)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,270 | INFO     | job 7036778463 has state=finished
[2026-03-03 21:28:37] 2026-03-04 02:28:04,271 | INFO     | preparing for final server update for job 7036778463 in state='finished'
[2026-03-03 21:28:37] 2026-03-04 02:28:04,271 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-7036778463/jobReport.json
[2026-03-03 21:28:37] 2026-03-04 02:28:04,272 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-03-03 21:28:37] 2026-03-04 02:28:04,273 | INFO     | this job has now completed (state=finished)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,273 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,273 | INFO     | log transfer has been attempted: DONE
[2026-03-03 21:28:37] 2026-03-04 02:28:04,273 | INFO     | job 7036778463 has finished - writing final server update
[2026-03-03 21:28:37] 2026-03-04 02:28:04,273 | INFO     | total number of processed events: 400 (read)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,286 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7036778463/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,286 | INFO     | extracted standard info from prmon json
[2026-03-03 21:28:37] 2026-03-04 02:28:04,286 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 21:28:37] 2026-03-04 02:28:04,286 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 21:28:37] 2026-03-04 02:28:04,286 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 21:28:37] 2026-03-04 02:28:04,286 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 21:28:37] 2026-03-04 02:28:04,287 | INFO     | fitting pss+swap vs Time
[2026-03-03 21:28:37] 2026-03-04 02:28:04,287 | INFO     | sum of square deviations: 60482994.5
[2026-03-03 21:28:37] 2026-03-04 02:28:04,287 | INFO     | sum of deviations: -701404535.0
[2026-03-03 21:28:37] 2026-03-04 02:28:04,287 | INFO     | mean x: 1772589380.5
[2026-03-03 21:28:37] 2026-03-04 02:28:04,287 | INFO     | mean y: 2598918.9655172415
[2026-03-03 21:28:37] 2026-03-04 02:28:04,287 | INFO     | intersect: 20558827003.465214
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | chi2: 0.0049639514131971565
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | current memory leak: -11.60 B/s (using 58 data points, chi2=0.00)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | ..............................
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . Timing measurements:
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . get job = 0 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . initial setup = 32 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . payload setup = 38 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . stage-in = 0 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . payload execution = 3954 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . stage-out = 0 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | . log creation = 0 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,288 | INFO     | ..............................
[2026-03-03 21:28:37] 2026-03-04 02:28:04,342 | INFO     | 
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | job summary report
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | --------------------------------------------------
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | PanDA job id: 7036778463
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | task id: 48838577
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | errors: (none)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | pilot state: finished 
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | transexitcode: 0
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | exeerrorcode: 0
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | exeerrordiag: 
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | exitcode: 0
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | exitmsg: OK
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | cpuconsumptiontime: 26814 s
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | nevents: 400
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | neventsw: 0
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | pid: 881249
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | pgrp: 881249
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | corecount: 8
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | event service: False
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | sizes: {0: 2286645, 1: 2287106, 12: 2287106, 3996: 2313067, 3997: 2322065, 3999: 2322121, 4002: 2322443}
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | --------------------------------------------------
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | 
[2026-03-03 21:28:37] 2026-03-04 02:28:04,343 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-03 21:28:37] 2026-03-04 02:28:04,365 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,365 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,365 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,366 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,367 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,367 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 21:28:37] 2026-03-04 02:28:04,367 | INFO     | job 7036778463 has completed (purged errors)
[2026-03-03 21:28:37] 2026-03-04 02:28:04,367 | INFO     | overall cleanup function is called
[2026-03-03 21:28:37] 2026-03-04 02:28:05,376 | INFO     | --- collectZombieJob: --- 10, [881249]
[2026-03-03 21:28:37] 2026-03-04 02:28:05,376 | INFO     | zombie collector waiting for pid 881249
[2026-03-03 21:28:37] 2026-03-04 02:28:05,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 21:28:37] 2026-03-04 02:28:05,377 | INFO     | collected zombie processes
[2026-03-03 21:28:37] 2026-03-04 02:28:05,377 | INFO     | will attempt to kill all subprocesses of pid=881249
[2026-03-03 21:28:37] 2026-03-04 02:28:05,862 | INFO     | process IDs to be killed: [881249] (in reverse order)
[2026-03-03 21:28:37] 2026-03-04 02:28:06,034 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 21:28:37] 2026-03-04 02:28:06,035 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 21:28:37] 2026-03-04 02:28:06,059 | INFO     | did not find any defunct processes belonging to 881249
[2026-03-03 21:28:37] 2026-03-04 02:28:06,078 | INFO     | did not find any defunct processes belonging to 881249
[2026-03-03 21:28:37] 2026-03-04 02:28:06,078 | INFO     | ready for new job
[2026-03-03 21:28:37] 2026-03-04 02:28:06,078 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 21:28:37] 2026-03-04 02:28:06,079 | INFO     | **************************************
[2026-03-03 21:28:37] 2026-03-04 02:28:06,080 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 21:28:37] 2026-03-04 02:28:06,080 | INFO     | **************************************
[2026-03-03 21:28:37] 2026-03-04 02:28:06,080 | INFO     | 
[2026-03-03 21:28:37] 2026-03-04 02:28:06,084 | INFO     | architecture information:
[2026-03-03 21:28:37] 2026-03-04 02:28:06,084 | INFO     | executing command: cat /etc/os-release
[2026-03-03 21:28:37] 2026-03-04 02:28:06,100 | INFO     | cat /etc/os-release:
[2026-03-03 21:28:37] NAME="CentOS Linux"
[2026-03-03 21:28:37] VERSION="7 (Core)"
[2026-03-03 21:28:37] ID="centos"
[2026-03-03 21:28:37] ID_LIKE="rhel fedora"
[2026-03-03 21:28:37] VERSION_ID="7"
[2026-03-03 21:28:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 21:28:37] ANSI_COLOR="0;31"
[2026-03-03 21:28:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 21:28:37] HOME_URL="https://www.centos.org/"
[2026-03-03 21:28:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 21:28:37] 
[2026-03-03 21:28:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 21:28:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 21:28:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 21:28:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 21:28:37] 
[2026-03-03 21:28:37] 2026-03-04 02:28:06,100 | INFO     | **************************************
[2026-03-03 21:28:37] 2026-03-04 02:28:06,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-03 21:28:37] 2026-03-04 02:28:06,622 | INFO     | sufficient remaining disk space (166528548864 B)
[2026-03-03 21:28:37] 2026-03-04 02:28:06,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 21:28:37] 2026-03-04 02:28:06,622 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 21:28:37] 2026-03-04 02:28:06,622 | INFO     | update_server=False
[2026-03-03 21:28:37] 2026-03-04 02:28:06,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 21:28:37] 2026-03-04 02:28:06,739 | INFO     | all payload control threads have been joined
[2026-03-03 21:28:37] 2026-03-04 02:28:07,001 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 21:28:37] 2026-03-04 02:28:07,002 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 21:28:37] 2026-03-04 02:28:07,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:28:37] 2026-03-04 02:28:07,002 | INFO     | will abort loop
[2026-03-03 21:28:37] 2026-03-04 02:28:07,147 | INFO     | all job control threads have been joined
[2026-03-03 21:28:37] 2026-03-04 02:28:07,452 | INFO     | all data control threads have been joined
[2026-03-03 21:28:37] 2026-03-04 02:28:07,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 21:28:37] 2026-03-04 02:28:07,628 | INFO     | [job] retrieve thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:07,744 | INFO     | [payload] control thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:07,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 21:28:37] 2026-03-04 02:28:07,980 | INFO     | [job] validate thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,006 | INFO     | [job] job monitor thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,153 | INFO     | [job] control thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,312 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,321 | INFO     | [payload] failed_post thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,390 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,458 | INFO     | [data] control thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,668 | INFO     | [data] copytool_in thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,783 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:08,946 | INFO     | [payload] validate_post thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:09,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:28:37] 2026-03-04 02:28:09,926 | INFO     | [data] copytool_out thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:10,359 | INFO     | [job] queue monitor thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:11,521 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:15,682 | INFO     | [monitor] cgroup control has ended
[2026-03-03 21:28:37] 2026-03-04 02:28:17,099 | INFO     | job.realtimelogging is not enabled
[2026-03-03 21:28:37] 2026-03-04 02:28:18,104 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 21:28:37] 2026-03-04 02:28:18,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140608785286976)>', '<ExcThread(monitor, started 140608438007552)>']
[2026-03-03 21:28:37] 2026-03-04 02:28:23,432 | INFO     | all workflow threads have been joined
[2026-03-03 21:28:37] 2026-03-04 02:28:23,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 21:28:37] 2026-03-04 02:28:23,433 | INFO     | traces error code: 0
[2026-03-03 21:28:37] 2026-03-04 02:28:23,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 21:28:37] 2026-03-04 02:28:37,406 | INFO     | PID=872071 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 21:28:37] 2026-03-04 02:28:37,406 | INFO     | .. there are 33 such processes running
[2026-03-03 21:28:37] 2026-03-04 02:28:37,406 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 21:28:37] 2026-03-04 02:28:37,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 21:28:37] 2026-03-04 02:28:37,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 21:28:37] 2026-03-04 02:28:37,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 21:28:37] 2026-03-04 02:28:37,406 | INFO     | [monitor] control thread has ended
[2026-03-03 21:28:37] 2026-03-04 02:28:37,526 [wrapper] ==== pilot stdout END ====
[2026-03-03 21:28:37] 2026-03-04 02:28:37,529 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 21:28:37] 2026-03-04 02:28:37,531 [wrapper] pilotpid: 872071
[2026-03-03 21:28:37] 2026-03-04 02:28:37,532 [wrapper] Pilot exit status: 0
[2026-03-03 21:28:37] 2026-03-04 02:28:37,541 [wrapper] pandaids: 7036778463
[2026-03-03 21:28:37] 2026-03-04 02:28:37,656 [wrapper] cleanup supervisor_pilot 1297948 872072
[2026-03-03 21:28:37] 2026-03-04 02:28:37,659 [wrapper] Test setup, not cleaning
[2026-03-03 21:28:37] 2026-03-04 02:28:37,662 [wrapper] apfmon messages muted
[2026-03-03 21:28:37] 2026-03-04 02:28:37,666 [wrapper] ==== wrapper stdout END ====
[2026-03-03 21:28:37] 2026-03-04 02:28:37,669 [wrapper] ==== wrapper stderr END ====
[2026-03-03 21:28:37]  *** Error codes and diagnostics ***
[2026-03-03 21:28:37]     "exeErrorCode": 0,
[2026-03-03 21:28:37]     "exeErrorDiag": "",
[2026-03-03 21:28:37]     "pilotErrorCode": 0,
[2026-03-03 21:28:37]     "pilotErrorDiag": "",
[2026-03-03 21:28:37]  *** Listing of results directory ***
[2026-03-03 21:28:37] total 510664
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 17:22 pilot3.tar.gz
[2026-03-03 21:28:37] -rwx------. 1 boincer umatlas     36322 Mar  3 17:27 runpilot2-wrapper.sh
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 17:28 queuedata.json
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas       100 Mar  3 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 21:28:37] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 20:19 run_atlas
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas       105 Mar  3 20:19 job.xml
[2026-03-03 21:28:37] -rw-r--r--. 2 boincer umatlas 292696228 Mar  3 20:19 EVNT.48220197._000263.pool.root.1
[2026-03-03 21:28:37] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 20:19 start_atlas.sh
[2026-03-03 21:28:37] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 20:19 shared
[2026-03-03 21:28:37] -rw-r--r--. 2 boincer umatlas    597978 Mar  3 20:19 input.tar.gz
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas         0 Mar  3 20:19 boinc_lockfile
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas      2567 Mar  3 20:19 pandaJob.out
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas        57 Mar  3 20:19 setup.sh.local
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas    998484 Mar  3 20:20 agis_schedconf.cvmfs.json
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas   1516092 Mar  3 20:20 agis_ddmendpoints.agis.ALL.json
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas       428 Mar  3 20:21 workernode_map.json
[2026-03-03 21:28:37] drwx------. 5 boincer umatlas      4096 Mar  3 20:21 pilot3
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas      7185 Mar  3 21:22 init_data.xml
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas 224475237 Mar  3 21:27 HITS.48838577._006641.pool.root.1
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas       529 Mar  3 21:27 boinc_task_state.xml
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas        95 Mar  3 21:27 pilot_heartbeat.json
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas      1044 Mar  3 21:27 memory_monitor_summary.json
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas    321307 Mar  3 21:27 log.48838577._006641.job.log.tgz.1
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas      6325 Mar  3 21:28 heartbeat.json
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas        27 Mar  3 21:28 wrapper_checkpoint.txt
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 21:28 boinc_mmap_file
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas       822 Mar  3 21:28 pilotlog.txt
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas    585868 Mar  3 21:28 log.48838577._006641.job.log.1
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas       357 Mar  3 21:28 output.list
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas       620 Mar  3 21:28 runtime_log
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas    921600 Mar  3 21:28 result.tar.gz
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas      9341 Mar  3 21:28 runtime_log.err
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas       652 Mar  3 21:28 8eTLDmMOnH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKCILDmvbFtWm.diag
[2026-03-03 21:28:37] -rw-r--r--. 1 boincer umatlas     21546 Mar  3 21:28 stderr.txt
[2026-03-03 21:28:37] HITS file was successfully produced:
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas 224475237 Mar  3 21:27 shared/HITS.pool.root.1
[2026-03-03 21:28:37]  *** Contents of shared directory: ***
[2026-03-03 21:28:37] total 506564
[2026-03-03 21:28:37] -rw-r--r--. 2 boincer umatlas 292696228 Mar  3 20:19 ATLAS.root_0
[2026-03-03 21:28:37] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 20:19 start_atlas.sh
[2026-03-03 21:28:37] -rw-r--r--. 2 boincer umatlas    597978 Mar  3 20:19 input.tar.gz
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas 224475237 Mar  3 21:27 HITS.pool.root.1
[2026-03-03 21:28:37] -rw-------. 1 boincer umatlas    921600 Mar  3 21:28 result.tar.gz
21:28:39 (863052): run_atlas exited; CPU time 26939.168553
21:28:39 (863052): called boinc_finish(0)

</stderr_txt>
]]>

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