Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:58:18 (1655225): wrapper (7.7.26015): starting
09:58:18 (1655225): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 09:58:18] Arguments: --nthreads 4
[2026-03-04 09:58:18] Threads: 4
[2026-03-04 09:58:18] Checking for CVMFS
[2026-03-04 09:58:18] No cvmfs_config command found, will try listing directly
[2026-03-04 09:58:18] CVMFS is ok
[2026-03-04 09:58:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 09:58:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 09:58:18] Further information can be found at the LHC@home message board.
[2026-03-04 09:58:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 09:58:18] Checking for apptainer binary...
[2026-03-04 09:58:18] which: no apptainer in ((null))
[2026-03-04 09:58:18] apptainer is not installed, using version from CVMFS
[2026-03-04 09:58:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 09:58:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-04 09:58:18] apptainer works
[2026-03-04 09:58:18] Set ATHENA_PROC_NUMBER=4
[2026-03-04 09:58:18] Set ATHENA_CORE_NUMBER=4
[2026-03-04 09:58:18] Starting ATLAS job with PandaID=7036755122
[2026-03-04 09:58:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 12:25:55]  *** The last 200 lines of the pilot log: ***
[2026-03-04 12:25:55] 2026-03-04 11:24:46,903 | INFO     | fitting pss+swap vs Time
[2026-03-04 12:25:55] 2026-03-04 11:24:46,904 | INFO     | sum of square deviations: 925859220.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,904 | INFO     | sum of deviations: 6446573177.5
[2026-03-04 12:25:55] 2026-03-04 11:24:46,904 | INFO     | mean x: 1772619102.5
[2026-03-04 12:25:55] 2026-03-04 11:24:46,905 | INFO     | mean y: 2312790.0625
[2026-03-04 12:25:55] 2026-03-04 11:24:46,905 | INFO     | intersect: -12340080646.491087
[2026-03-04 12:25:55] 2026-03-04 11:24:46,905 | INFO     | chi2: 1.8276476237415031
[2026-03-04 12:25:55] 2026-03-04 11:24:46,905 | INFO     | sum of square deviations: 832722590.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,906 | INFO     | sum of deviations: 14254113694.999998
[2026-03-04 12:25:55] 2026-03-04 11:24:46,906 | INFO     | mean x: 1772618950.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,906 | INFO     | mean y: 2325192.6474820143
[2026-03-04 12:25:55] 2026-03-04 11:24:46,906 | INFO     | intersect: -30340447243.982964
[2026-03-04 12:25:55] 2026-03-04 11:24:46,906 | INFO     | chi2: 1.1616395449276276
[2026-03-04 12:25:55] 2026-03-04 11:24:46,907 | INFO     | current chi2=1.1616395449276276 (change=36.440726875481865 %)
[2026-03-04 12:25:55] 2026-03-04 11:24:46,907 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 12:25:55] 2026-03-04 11:24:46,907 | INFO     | sum of deviations: 13627903707.5
[2026-03-04 12:25:55] 2026-03-04 11:24:46,907 | INFO     | mean x: 1772618797.5
[2026-03-04 12:25:55] 2026-03-04 11:24:46,908 | INFO     | mean y: 2324090.3358208956
[2026-03-04 12:25:55] 2026-03-04 11:24:46,908 | INFO     | intersect: -32377596166.322495
[2026-03-04 12:25:55] 2026-03-04 11:24:46,908 | INFO     | chi2: 1.1628693465494755
[2026-03-04 12:25:55] 2026-03-04 11:24:46,908 | INFO     | current chi2=1.1628693465494755 (change=-0.10586774763462069 %)
[2026-03-04 12:25:55] 2026-03-04 11:24:46,908 | INFO     | right removable region: 133
[2026-03-04 12:25:55] 2026-03-04 11:24:46,908 | INFO     | sum of square deviations: 832722590.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,909 | INFO     | sum of deviations: -9123227527.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,909 | INFO     | mean x: 1772619255.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,909 | INFO     | mean y: 2337784.4820143883
[2026-03-04 12:25:55] 2026-03-04 11:24:46,909 | INFO     | intersect: 19422981557.465565
[2026-03-04 12:25:55] 2026-03-04 11:24:46,909 | INFO     | chi2: 0.6902518836251108
[2026-03-04 12:25:55] 2026-03-04 11:24:46,910 | INFO     | current chi2=0.6902518836251108 (change=62.23276989182145 %)
[2026-03-04 12:25:55] 2026-03-04 11:24:46,910 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 12:25:55] 2026-03-04 11:24:46,910 | INFO     | sum of deviations: -8151762663.500001
[2026-03-04 12:25:55] 2026-03-04 11:24:46,911 | INFO     | mean x: 1772619407.5
[2026-03-04 12:25:55] 2026-03-04 11:24:46,911 | INFO     | mean y: 2336068.604477612
[2026-03-04 12:25:55] 2026-03-04 11:24:46,911 | INFO     | intersect: 19370943412.276752
[2026-03-04 12:25:55] 2026-03-04 11:24:46,911 | INFO     | chi2: 0.6900684708922901
[2026-03-04 12:25:55] 2026-03-04 11:24:46,911 | INFO     | current chi2=0.6900684708922901 (change=0.02657185545912359 %)
[2026-03-04 12:25:55] 2026-03-04 11:24:46,911 | INFO     | left removable region: 20
[2026-03-04 12:25:55] 2026-03-04 11:24:46,911 | INFO     | sum of square deviations: 447383272.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,912 | INFO     | sum of deviations: 483561823.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,912 | INFO     | mean x: 1772619377.0
[2026-03-04 12:25:55] 2026-03-04 11:24:46,912 | INFO     | mean y: 2347929.0884955754
[2026-03-04 12:25:55] 2026-03-04 11:24:46,912 | INFO     | intersect: -1913617890.543769
[2026-03-04 12:25:55] 2026-03-04 11:24:46,912 | INFO     | chi2: 0.00022253185997555373
[2026-03-04 12:25:55] 2026-03-04 11:24:46,912 | INFO     | current memory leak: 1.08 B/s (using 113 data points, chi2=0.00)
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | could have reported an average CPU frequency of 2735 MHz (8 samples)
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | ..............................
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . Timing measurements:
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . get job = 0 s
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . initial setup = 6 s
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . payload setup = 7 s
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . stage-in = 0 s
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . payload execution = 8745 s
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . stage-out = 0 s
[2026-03-04 12:25:55] 2026-03-04 11:24:46,913 | INFO     | . log creation = 0 s
[2026-03-04 12:25:55] 2026-03-04 11:24:46,914 | INFO     | ..............................
[2026-03-04 12:25:55] 2026-03-04 11:24:47,137 | INFO     | 
[2026-03-04 12:25:55] 2026-03-04 11:24:47,137 | INFO     | job summary report
[2026-03-04 12:25:55] 2026-03-04 11:24:47,137 | INFO     | --------------------------------------------------
[2026-03-04 12:25:55] 2026-03-04 11:24:47,137 | INFO     | PanDA job id: 7036755122
[2026-03-04 12:25:55] 2026-03-04 11:24:47,137 | INFO     | task id: 48838577
[2026-03-04 12:25:55] 2026-03-04 11:24:47,137 | INFO     | errors: (none)
[2026-03-04 12:25:55] 2026-03-04 11:24:47,137 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | pilot state: finished 
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | transexitcode: 0
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | exeerrorcode: 0
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | exeerrordiag: 
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | exitcode: 0
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | exitmsg: OK
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | cpuconsumptiontime: 33483 s
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | nevents: 400
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | neventsw: 0
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | pid: 1664559
[2026-03-04 12:25:55] 2026-03-04 11:24:47,138 | INFO     | pgrp: 1664559
[2026-03-04 12:25:55] 2026-03-04 11:24:47,139 | INFO     | corecount: 4
[2026-03-04 12:25:55] 2026-03-04 11:24:47,139 | INFO     | event service: False
[2026-03-04 12:25:55] 2026-03-04 11:24:47,139 | INFO     | sizes: {0: 2286827, 1: 2287117, 11: 2287117, 8757: 2315163, 8759: 2324239, 8760: 2324377}
[2026-03-04 12:25:55] 2026-03-04 11:24:47,139 | INFO     | --------------------------------------------------
[2026-03-04 12:25:55] 2026-03-04 11:24:47,139 | INFO     | 
[2026-03-04 12:25:55] 2026-03-04 11:24:47,139 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-03-04 12:25:55] 2026-03-04 11:24:47,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,174 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,174 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,174 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 12:25:55] 2026-03-04 11:24:47,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,174 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 12:25:55] 2026-03-04 11:24:47,174 | INFO     | job 7036755122 has completed (purged errors)
[2026-03-04 12:25:55] 2026-03-04 11:24:47,174 | INFO     | overall cleanup function is called
[2026-03-04 12:25:55] 2026-03-04 11:24:47,925 | WARNING  | process 1664559 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 12:25:55] 2026-03-04 11:24:48,183 | INFO     | --- collectZombieJob: --- 10, [1664559]
[2026-03-04 12:25:55] 2026-03-04 11:24:48,184 | INFO     | zombie collector waiting for pid 1664559
[2026-03-04 12:25:55] 2026-03-04 11:24:48,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 12:25:55] 2026-03-04 11:24:48,184 | INFO     | collected zombie processes
[2026-03-04 12:25:55] 2026-03-04 11:24:48,184 | INFO     | will attempt to kill all subprocesses of pid=1664559
[2026-03-04 12:25:55] 2026-03-04 11:24:48,589 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:25:55] 2026-03-04 11:24:48,590 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7036755122/payload.stdout) since it has not been created yet
[2026-03-04 12:25:55] 2026-03-04 11:24:48,590 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-04 12:25:55] 2026-03-04 11:24:48,614 | INFO     | sufficient remaining disk space (3312194682880 B)
[2026-03-04 12:25:55] 2026-03-04 11:24:48,614 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-04 12:25:55] 2026-03-04 11:24:48,614 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7036755122/HITS.48838577._006149.pool.root.1 since it does not exist
[2026-03-04 12:25:55] 2026-03-04 11:24:49,763 | INFO     | process IDs to be killed: [1664559] (in reverse order)
[2026-03-04 12:25:55] 2026-03-04 11:24:49,864 | INFO     | number of running child processes to parent process 1664559: 1
[2026-03-04 12:25:55] 2026-03-04 11:24:49,865 | INFO     | maximum number of monitored processes: 6
[2026-03-04 12:25:55] 2026-03-04 11:24:49,865 | INFO     | aborting job monitoring since job object (job id=7036755122) has expired
[2026-03-04 12:25:55] 2026-03-04 11:24:49,996 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 12:25:55] 2026-03-04 11:24:49,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 12:25:55] 2026-03-04 11:24:50,017 | INFO     | did not find any defunct processes belonging to 1664559
[2026-03-04 12:25:55] 2026-03-04 11:24:50,033 | INFO     | did not find any defunct processes belonging to 1664559
[2026-03-04 12:25:55] 2026-03-04 11:24:50,033 | INFO     | ready for new job
[2026-03-04 12:25:55] 2026-03-04 11:24:50,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 12:25:55] 2026-03-04 11:24:50,035 | INFO     | **************************************
[2026-03-04 12:25:55] 2026-03-04 11:24:50,036 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 12:25:55] 2026-03-04 11:24:50,036 | INFO     | **************************************
[2026-03-04 12:25:55] 2026-03-04 11:24:50,036 | INFO     | 
[2026-03-04 12:25:55] 2026-03-04 11:24:50,044 | INFO     | architecture information:
[2026-03-04 12:25:55] 2026-03-04 11:24:50,044 | INFO     | executing command: cat /etc/os-release
[2026-03-04 12:25:55] 2026-03-04 11:24:50,071 | INFO     | cat /etc/os-release:
[2026-03-04 12:25:55] NAME="CentOS Linux"
[2026-03-04 12:25:55] VERSION="7 (Core)"
[2026-03-04 12:25:55] ID="centos"
[2026-03-04 12:25:55] ID_LIKE="rhel fedora"
[2026-03-04 12:25:55] VERSION_ID="7"
[2026-03-04 12:25:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 12:25:55] ANSI_COLOR="0;31"
[2026-03-04 12:25:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 12:25:55] HOME_URL="https://www.centos.org/"
[2026-03-04 12:25:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 12:25:55] 
[2026-03-04 12:25:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 12:25:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 12:25:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 12:25:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 12:25:55] 
[2026-03-04 12:25:55] 2026-03-04 11:24:50,071 | INFO     | **************************************
[2026-03-04 12:25:55] 2026-03-04 11:24:50,574 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-04 12:25:55] 2026-03-04 11:24:50,598 | INFO     | sufficient remaining disk space (3312193634304 B)
[2026-03-04 12:25:55] 2026-03-04 11:24:50,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 12:25:55] 2026-03-04 11:24:50,598 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 12:25:55] 2026-03-04 11:24:50,598 | INFO     | update_server=False
[2026-03-04 12:25:55] 2026-03-04 11:24:50,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 12:25:55] 2026-03-04 11:24:50,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:25:55] 2026-03-04 11:24:50,599 | INFO     | will abort loop
[2026-03-04 12:25:55] 2026-03-04 11:24:51,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 12:25:55] 2026-03-04 11:24:51,355 | INFO     | all data control threads have been joined
[2026-03-04 12:25:55] 2026-03-04 11:24:51,364 | INFO     | all payload control threads have been joined
[2026-03-04 12:25:55] 2026-03-04 11:24:51,604 | INFO     | [job] retrieve thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:51,605 | INFO     | [job] job monitor thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:51,623 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:51,938 | INFO     | [payload] validate_post thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,008 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:25:55] 2026-03-04 11:24:52,075 | INFO     | all job control threads have been joined
[2026-03-04 12:25:55] 2026-03-04 11:24:52,106 | INFO     | [data] copytool_in thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,361 | INFO     | [data] control thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,369 | INFO     | [payload] control thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,611 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 12:25:55] 2026-03-04 11:24:52,739 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,810 | INFO     | [payload] failed_post thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,950 | INFO     | [job] validate thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:52,962 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:53,014 | INFO     | [job] queue monitor thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:53,081 | INFO     | [job] control thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:53,295 | INFO     | [data] copytool_out thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:24:56,617 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 12:25:55] 2026-03-04 11:25:19,189 | INFO     | PID=1659373 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 12:25:55] 2026-03-04 11:25:19,189 | INFO     | .. there are 19 such processes running
[2026-03-04 12:25:55] 2026-03-04 11:25:19,189 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 12:25:55] 2026-03-04 11:25:19,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 12:25:55] 2026-03-04 11:25:19,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 12:25:55] 2026-03-04 11:25:49,064 | INFO     | [monitor] cgroup control has ended
[2026-03-04 12:25:55] 2026-03-04 11:25:49,662 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22898937395008)>', '<ExcThread(monitor, started 22898697053952)>']
[2026-03-04 12:25:55] 2026-03-04 11:25:50,339 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 12:25:55] 2026-03-04 11:25:50,340 | INFO     | [monitor] control thread has ended
[2026-03-04 12:25:55] 2026-03-04 11:25:54,682 | INFO     | all workflow threads have been joined
[2026-03-04 12:25:55] 2026-03-04 11:25:54,682 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 12:25:55] 2026-03-04 11:25:54,682 | INFO     | traces error code: 0
[2026-03-04 12:25:55] 2026-03-04 11:25:54,683 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 12:25:55] 2026-03-04 11:25:54,825 [wrapper] ==== pilot stdout END ====
[2026-03-04 12:25:55] 2026-03-04 11:25:54,829 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 12:25:55] 2026-03-04 11:25:54,833 [wrapper] pilotpid: 1659373
[2026-03-04 12:25:55] 2026-03-04 11:25:54,836 [wrapper] Pilot exit status: 0
[2026-03-04 12:25:55] 2026-03-04 11:25:54,852 [wrapper] pandaids: 7036755122
[2026-03-04 12:25:55] 2026-03-04 11:25:54,986 [wrapper] cleanup supervisor_pilot 1881549 1659374
[2026-03-04 12:25:55] 2026-03-04 11:25:54,990 [wrapper] Test setup, not cleaning
[2026-03-04 12:25:55] 2026-03-04 11:25:54,994 [wrapper] apfmon messages muted
[2026-03-04 12:25:55] 2026-03-04 11:25:54,998 [wrapper] ==== wrapper stdout END ====
[2026-03-04 12:25:55] 2026-03-04 11:25:55,002 [wrapper] ==== wrapper stderr END ====
[2026-03-04 12:25:55]  *** Error codes and diagnostics ***
[2026-03-04 12:25:55]     "exeErrorCode": 0,
[2026-03-04 12:25:55]     "exeErrorDiag": "",
[2026-03-04 12:25:55]     "pilotErrorCode": 0,
[2026-03-04 12:25:55]     "pilotErrorDiag": "",
[2026-03-04 12:25:55]  *** Listing of results directory ***
[2026-03-04 12:25:55] total 510340
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc    584627 Mar  3 23:22 pilot3.tar.gz
[2026-03-04 12:25:55] -rwx------ 1 boinc boinc     36322 Mar  3 23:22 runpilot2-wrapper.sh
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc      5111 Mar  3 23:22 queuedata.json
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc       100 Mar  4 09:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 12:25:55] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 09:58 run_atlas
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc       105 Mar  4 09:58 job.xml
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc      6697 Mar  4 09:58 init_data.xml
[2026-03-04 12:25:55] -rw-r--r-- 2 boinc boinc 288891036 Mar  4 09:58 EVNT.48220197._000244.pool.root.1
[2026-03-04 12:25:55] -rw-r--r-- 2 boinc boinc     15845 Mar  4 09:58 start_atlas.sh
[2026-03-04 12:25:55] drwxrwx--x 2 boinc boinc      4096 Mar  4 09:58 shared
[2026-03-04 12:25:55] -rw-r--r-- 2 boinc boinc    597967 Mar  4 09:58 input.tar.gz
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc         0 Mar  4 09:58 boinc_lockfile
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc      2567 Mar  4 09:58 pandaJob.out
[2026-03-04 12:25:55] -rw------- 1 boinc boinc    997384 Mar  4 09:58 agis_schedconf.cvmfs.json
[2026-03-04 12:25:55] -rw------- 1 boinc boinc   1516092 Mar  4 09:58 agis_ddmendpoints.agis.ALL.json
[2026-03-04 12:25:55] -rw------- 1 boinc boinc       443 Mar  4 09:58 workernode_map.json
[2026-03-04 12:25:55] drwx------ 5 boinc boinc      4096 Mar  4 09:58 pilot3
[2026-03-04 12:25:55] -rw------- 1 boinc boinc 226665481 Mar  4 12:24 HITS.48838577._006149.pool.root.1
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc       529 Mar  4 12:24 boinc_task_state.xml
[2026-03-04 12:25:55] -rw------- 1 boinc boinc        95 Mar  4 12:24 pilot_heartbeat.json
[2026-03-04 12:25:55] -rw------- 1 boinc boinc      1024 Mar  4 12:24 memory_monitor_summary.json
[2026-03-04 12:25:55] -rw------- 1 boinc boinc    313561 Mar  4 12:24 log.48838577._006149.job.log.tgz.1
[2026-03-04 12:25:55] -rw------- 1 boinc boinc      6345 Mar  4 12:24 heartbeat.json
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc      8192 Mar  4 12:25 boinc_mmap_file
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc        27 Mar  4 12:25 wrapper_checkpoint.txt
[2026-03-04 12:25:55] -rw------- 1 boinc boinc      4834 Mar  4 12:25 pilotlog.txt
[2026-03-04 12:25:55] -rw------- 1 boinc boinc   1231791 Mar  4 12:25 log.48838577._006149.job.log.1
[2026-03-04 12:25:55] -rw------- 1 boinc boinc       357 Mar  4 12:25 output.list
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc       620 Mar  4 12:25 runtime_log
[2026-03-04 12:25:55] -rw------- 1 boinc boinc   1566720 Mar  4 12:25 result.tar.gz
[2026-03-04 12:25:55] -rw------- 1 boinc boinc       662 Mar  4 12:25 zmyMDmRJnH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmk5HLDmICPMDn.diag
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc      9204 Mar  4 12:25 runtime_log.err
[2026-03-04 12:25:55] -rw-r--r-- 1 boinc boinc     21116 Mar  4 12:25 stderr.txt
[2026-03-04 12:25:55] HITS file was successfully produced:
[2026-03-04 12:25:55] -rw------- 1 boinc boinc 226665481 Mar  4 12:24 shared/HITS.pool.root.1
[2026-03-04 12:25:55]  *** Contents of shared directory: ***
[2026-03-04 12:25:55] total 505620
[2026-03-04 12:25:55] -rw-r--r-- 2 boinc boinc 288891036 Mar  4 09:58 ATLAS.root_0
[2026-03-04 12:25:55] -rw-r--r-- 2 boinc boinc     15845 Mar  4 09:58 start_atlas.sh
[2026-03-04 12:25:55] -rw-r--r-- 2 boinc boinc    597967 Mar  4 09:58 input.tar.gz
[2026-03-04 12:25:55] -rw------- 1 boinc boinc 226665481 Mar  4 12:24 HITS.pool.root.1
[2026-03-04 12:25:55] -rw------- 1 boinc boinc   1566720 Mar  4 12:25 result.tar.gz
12:25:56 (1655225): run_atlas exited; CPU time 33905.038428
12:25:56 (1655225): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN