Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:33:41 (2308287): wrapper (7.7.26015): starting
17:33:41 (2308287): wrapper: running run_atlas (--nthreads 12)
[2026-03-05 17:33:41] Arguments: --nthreads 12
[2026-03-05 17:33:41] Threads: 12
[2026-03-05 17:33:41] Checking for CVMFS
[2026-03-05 17:33:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-05 17:33:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-05 17:33:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-05 17:33:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-05 17:33:43] 2.13.3.0 1006805 5112 45936 156926 0 49 2590489 4096001 0 130560 0 2563729 99.984 188356 248 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-05 17:33:43] CVMFS is ok
[2026-03-05 17:33:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 17:33:43] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-05 17:33:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-05 17:33:43] Further information can be found at the LHC@home message board.
[2026-03-05 17:33:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 17:33:43] Checking for apptainer binary...
[2026-03-05 17:33:43] apptainer is not installed, using version from CVMFS
[2026-03-05 17:33:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 17:33:44] ws24
[2026-03-05 17:33:44] apptainer works
[2026-03-05 17:33:44] Set ATHENA_PROC_NUMBER=12
[2026-03-05 17:33:44] Set ATHENA_CORE_NUMBER=12
[2026-03-05 17:33:44] Starting ATLAS job with PandaID=7036296643
[2026-03-05 17:33:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 19:06:52]  *** The last 200 lines of the pilot log: ***
[2026-03-05 19:06:52]  mtime=0
[2026-03-05 19:06:52]  protocol_id=None
[2026-03-05 19:06:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 19:06:52]  replicas=None
[2026-03-05 19:06:52]  scope=mc23_13p6TeV
[2026-03-05 19:06:52]  status=None
[2026-03-05 19:06:52]  status_code=0
[2026-03-05 19:06:52]  storage_token=
[2026-03-05 19:06:52]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-7036296643/log.48849456._000022.job.log.tgz.1
[2026-03-05 19:06:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/6a/log.48849456._000022.job.log.tgz.1
[2026-03-05 19:06:52]  workdir=None
[2026-03-05 19:06:52] ]
[2026-03-05 19:06:52] 2026-03-05 18:05:51,332 | INFO     | transferring file log.48849456._000022.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-7036296643/log.48849456._000022.job.log.tgz.1 to /var/lib/boinc
[2026-03-05 19:06:52] 2026-03-05 18:05:51,332 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-7036296643/log.48849456._000022.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.488494
[2026-03-05 19:06:52] 2026-03-05 18:05:51,353 | INFO     | adding to output.list: log.48849456._000022.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e6/6a/log.48849456._000022.job.log.tg
[2026-03-05 19:06:52] 2026-03-05 18:05:51,353 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 19:06:52] 2026-03-05 18:05:51,353 | INFO     | summary of transferred files:
[2026-03-05 19:06:52] 2026-03-05 18:05:51,354 | INFO     |  -- lfn=log.48849456._000022.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 19:06:52] 2026-03-05 18:05:51,354 | INFO     | stage-out finished correctly
[2026-03-05 19:06:52] 2026-03-05 18:05:51,669 | INFO     | time since job start (5413s) is within the limit (349056.0s)
[2026-03-05 19:06:52] 2026-03-05 18:05:51,995 | INFO     | monitor loop #401: job 0:7036296643 is in state 'finished'
[2026-03-05 19:06:52] 2026-03-05 18:05:51,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 19:06:52] 2026-03-05 18:05:53,675 | INFO     | time since job start (5415s) is within the limit (349056.0s)
[2026-03-05 19:06:52] 2026-03-05 18:05:54,498 | INFO     | monitor loop #402: job 0:7036296643 is in state 'finished'
[2026-03-05 19:06:52] 2026-03-05 18:05:54,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 19:06:52] 2026-03-05 18:05:54,524 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 19:06:52] 2026-03-05 18:05:55,680 | INFO     | time since job start (5417s) is within the limit (349056.0s)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,001 | INFO     | monitor loop #403: job 0:7036296643 is in state 'finished'
[2026-03-05 19:06:52] 2026-03-05 18:05:57,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,448 | INFO     | job 7036296643 has state=finished
[2026-03-05 19:06:52] 2026-03-05 18:05:57,449 | INFO     | preparing for final server update for job 7036296643 in state='finished'
[2026-03-05 19:06:52] 2026-03-05 18:05:57,449 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036296643/jobReport.json
[2026-03-05 19:06:52] 2026-03-05 18:05:57,453 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-03-05 19:06:52] 2026-03-05 18:05:57,454 | INFO     | this job has now completed (state=finished)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,454 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,454 | INFO     | log transfer has been attempted: DONE
[2026-03-05 19:06:52] 2026-03-05 18:05:57,454 | INFO     | job 7036296643 has finished - writing final server update
[2026-03-05 19:06:52] 2026-03-05 18:05:57,455 | INFO     | total number of processed events: 400 (read)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,464 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-7036296643/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,465 | INFO     | extracted standard info from prmon json
[2026-03-05 19:06:52] 2026-03-05 18:05:57,465 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 19:06:52] 2026-03-05 18:05:57,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 19:06:52] 2026-03-05 18:05:57,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 19:06:52] 2026-03-05 18:05:57,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 19:06:52] 2026-03-05 18:05:57,469 | INFO     | fitting pss+swap vs Time
[2026-03-05 19:06:52] 2026-03-05 18:05:57,469 | INFO     | sum of square deviations: 170944600.5
[2026-03-05 19:06:52] 2026-03-05 18:05:57,470 | INFO     | sum of deviations: -16437445581.0
[2026-03-05 19:06:52] 2026-03-05 18:05:57,470 | INFO     | mean x: 1772731339.5
[2026-03-05 19:06:52] 2026-03-05 18:05:57,471 | INFO     | mean y: 2891727.2439024393
[2026-03-05 19:06:52] 2026-03-05 18:05:57,471 | INFO     | intersect: 170462647914.53854
[2026-03-05 19:06:52] 2026-03-05 18:05:57,471 | INFO     | chi2: 0.15315318183048252
[2026-03-05 19:06:52] 2026-03-05 18:05:57,471 | INFO     | current memory leak: -96.16 B/s (using 82 data points, chi2=0.15)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,472 | INFO     | could have reported an average CPU frequency of 3183 MHz (6 samples)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,472 | INFO     | ..............................
[2026-03-05 19:06:52] 2026-03-05 18:05:57,472 | INFO     | . Timing measurements:
[2026-03-05 19:06:52] 2026-03-05 18:05:57,472 | INFO     | . get job = 0 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,473 | INFO     | . initial setup = 42 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,473 | INFO     | . payload setup = 8 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,473 | INFO     | . stage-in = 0 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,473 | INFO     | . payload execution = 5388 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,473 | INFO     | . stage-out = 0 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,473 | INFO     | . log creation = 0 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,474 | INFO     | ..............................
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | 
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | job summary report
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | --------------------------------------------------
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | PanDA job id: 7036296643
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | task id: 48849456
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | errors: (none)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | pilot state: finished 
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | transexitcode: 0
[2026-03-05 19:06:52] 2026-03-05 18:05:57,548 | INFO     | exeerrorcode: 0
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | exeerrordiag: 
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | exitcode: 0
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | exitmsg: OK
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | cpuconsumptiontime: 57010 s
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | nevents: 400
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | neventsw: 0
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | pid: 2316959
[2026-03-05 19:06:52] 2026-03-05 18:05:57,549 | INFO     | pgrp: 2316959
[2026-03-05 19:06:52] 2026-03-05 18:05:57,550 | INFO     | corecount: 12
[2026-03-05 19:06:52] 2026-03-05 18:05:57,550 | INFO     | event service: False
[2026-03-05 19:06:52] 2026-03-05 18:05:57,550 | INFO     | sizes: {0: 2295500, 1: 2295904, 11: 2295904, 5400: 2322445, 5402: 2331457, 5405: 2331513, 5408: 2331835}
[2026-03-05 19:06:52] 2026-03-05 18:05:57,550 | INFO     | --------------------------------------------------
[2026-03-05 19:06:52] 2026-03-05 18:05:57,550 | INFO     | 
[2026-03-05 19:06:52] 2026-03-05 18:05:57,550 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-03-05 19:06:52] 2026-03-05 18:05:57,585 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,587 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,587 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,587 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 19:06:52] 2026-03-05 18:05:57,587 | INFO     | job 7036296643 has completed (purged errors)
[2026-03-05 19:06:52] 2026-03-05 18:05:57,587 | INFO     | overall cleanup function is called
[2026-03-05 19:06:52] 2026-03-05 18:05:58,595 | INFO     | --- collectZombieJob: --- 10, [2316959]
[2026-03-05 19:06:52] 2026-03-05 18:05:58,595 | INFO     | zombie collector waiting for pid 2316959
[2026-03-05 19:06:52] 2026-03-05 18:05:58,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 19:06:52] 2026-03-05 18:05:58,595 | INFO     | collected zombie processes
[2026-03-05 19:06:52] 2026-03-05 18:05:58,595 | INFO     | will attempt to kill all subprocesses of pid=2316959
[2026-03-05 19:06:52] 2026-03-05 18:05:58,726 | INFO     | process IDs to be killed: [2316959] (in reverse order)
[2026-03-05 19:06:52] 2026-03-05 18:05:58,794 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 19:06:52] 2026-03-05 18:05:58,794 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 19:06:52] 2026-03-05 18:05:58,800 | INFO     | did not find any defunct processes belonging to 2316959
[2026-03-05 19:06:52] 2026-03-05 18:05:58,805 | INFO     | did not find any defunct processes belonging to 2316959
[2026-03-05 19:06:52] 2026-03-05 18:05:58,805 | INFO     | ready for new job
[2026-03-05 19:06:52] 2026-03-05 18:05:58,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 19:06:52] 2026-03-05 18:05:58,806 | INFO     | **************************************
[2026-03-05 19:06:52] 2026-03-05 18:05:58,806 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 19:06:52] 2026-03-05 18:05:58,806 | INFO     | **************************************
[2026-03-05 19:06:52] 2026-03-05 18:05:58,806 | INFO     | 
[2026-03-05 19:06:52] 2026-03-05 18:05:58,807 | INFO     | architecture information:
[2026-03-05 19:06:52] 2026-03-05 18:05:58,808 | INFO     | executing command: cat /etc/os-release
[2026-03-05 19:06:52] 2026-03-05 18:05:58,827 | INFO     | cat /etc/os-release:
[2026-03-05 19:06:52] NAME="CentOS Linux"
[2026-03-05 19:06:52] VERSION="7 (Core)"
[2026-03-05 19:06:52] ID="centos"
[2026-03-05 19:06:52] ID_LIKE="rhel fedora"
[2026-03-05 19:06:52] VERSION_ID="7"
[2026-03-05 19:06:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 19:06:52] ANSI_COLOR="0;31"
[2026-03-05 19:06:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 19:06:52] HOME_URL="https://www.centos.org/"
[2026-03-05 19:06:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 19:06:52] 
[2026-03-05 19:06:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 19:06:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 19:06:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 19:06:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 19:06:52] 
[2026-03-05 19:06:52] 2026-03-05 18:05:58,827 | INFO     | **************************************
[2026-03-05 19:06:52] 2026-03-05 18:05:59,330 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-03-05 19:06:52] 2026-03-05 18:05:59,354 | INFO     | sufficient remaining disk space (28055699456 B)
[2026-03-05 19:06:52] 2026-03-05 18:05:59,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 19:06:52] 2026-03-05 18:05:59,354 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 19:06:52] 2026-03-05 18:05:59,355 | INFO     | update_server=False
[2026-03-05 19:06:52] 2026-03-05 18:05:59,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 19:06:52] 2026-03-05 18:05:59,355 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 19:06:52] 2026-03-05 18:05:59,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 19:06:52] 2026-03-05 18:05:59,473 | INFO     | all job control threads have been joined
[2026-03-05 19:06:52] 2026-03-05 18:05:59,504 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-05 19:06:52] 2026-03-05 18:05:59,504 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-05 19:06:52] 2026-03-05 18:05:59,504 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 19:06:52] 2026-03-05 18:05:59,504 | INFO     | will abort loop
[2026-03-05 19:06:52] 2026-03-05 18:05:59,682 | INFO     | all data control threads have been joined
[2026-03-05 19:06:52] 2026-03-05 18:06:00,174 | INFO     | all payload control threads have been joined
[2026-03-05 19:06:52] 2026-03-05 18:06:00,359 | INFO     | [job] queue monitor thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:00,359 | INFO     | [job] retrieve thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:00,369 | INFO     | [payload] validate_post thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:00,479 | INFO     | [job] control thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:00,510 | INFO     | [job] job monitor thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:00,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 19:06:52] 2026-03-05 18:06:00,687 | INFO     | [data] control thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:00,713 | INFO     | [payload] failed_post thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:00,862 | INFO     | [job] validate thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:01,147 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:01,154 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:01,179 | INFO     | [payload] control thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:01,396 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:01,427 | INFO     | [data] copytool_out thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:01,707 | INFO     | [data] copytool_in thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:04,621 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:09,899 | INFO     | job.realtimelogging is not enabled
[2026-03-05 19:06:52] 2026-03-05 18:06:10,904 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 19:06:52] 2026-03-05 18:06:28,932 | INFO     | PID=2312449 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 19:06:52] 2026-03-05 18:06:28,932 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 19:06:52] 2026-03-05 18:06:28,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 19:06:52] 2026-03-05 18:06:28,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 19:06:52] 2026-03-05 18:06:46,808 | INFO     | [monitor] cgroup control has ended
[2026-03-05 19:06:52] 2026-03-05 18:06:47,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130801060316992)>', '<ExcThread(monitor, started 130800519464704)>']
[2026-03-05 19:06:52] 2026-03-05 18:06:48,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 19:06:52] 2026-03-05 18:06:48,015 | INFO     | [monitor] control thread has ended
[2026-03-05 19:06:52] 2026-03-05 18:06:52,160 | INFO     | all workflow threads have been joined
[2026-03-05 19:06:52] 2026-03-05 18:06:52,160 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 19:06:52] 2026-03-05 18:06:52,161 | INFO     | traces error code: 0
[2026-03-05 19:06:52] 2026-03-05 18:06:52,161 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 19:06:52] 2026-03-05 18:06:52,258 [wrapper] ==== pilot stdout END ====
[2026-03-05 19:06:52] 2026-03-05 18:06:52,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 19:06:52] 2026-03-05 18:06:52,263 [wrapper] pilotpid: 2312449
[2026-03-05 19:06:52] 2026-03-05 18:06:52,267 [wrapper] Pilot exit status: 0
[2026-03-05 19:06:52] 2026-03-05 18:06:52,276 [wrapper] pandaids: 7036296643
[2026-03-05 19:06:52] 2026-03-05 18:06:52,312 [wrapper] cleanup supervisor_pilot 2327175 2312450
[2026-03-05 19:06:52] 2026-03-05 18:06:52,314 [wrapper] Test setup, not cleaning
[2026-03-05 19:06:52] 2026-03-05 18:06:52,317 [wrapper] apfmon messages muted
[2026-03-05 19:06:52] 2026-03-05 18:06:52,319 [wrapper] ==== wrapper stdout END ====
[2026-03-05 19:06:52] 2026-03-05 18:06:52,322 [wrapper] ==== wrapper stderr END ====
[2026-03-05 19:06:52]  *** Error codes and diagnostics ***
[2026-03-05 19:06:52]     "exeErrorCode": 0,
[2026-03-05 19:06:52]     "exeErrorDiag": "",
[2026-03-05 19:06:52]     "pilotErrorCode": 0,
[2026-03-05 19:06:52]     "pilotErrorDiag": "",
[2026-03-05 19:06:52]  *** Listing of results directory ***
[2026-03-05 19:06:52] total 475856
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc    584627 Mar  3 14:35 pilot3.tar.gz
[2026-03-05 19:06:52] -rwx------ 1 boinc boinc     36322 Mar  3 14:36 runpilot2-wrapper.sh
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc      5111 Mar  3 14:38 queuedata.json
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc       100 Mar  5 17:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 19:06:52] -rwxr-xr-x 1 boinc boinc      7986 Mar  5 17:33 run_atlas
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc       105 Mar  5 17:33 job.xml
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc      9523 Mar  5 17:33 init_data.xml
[2026-03-05 19:06:52] -rw-r--r-- 2 boinc boinc 269049410 Mar  5 17:33 EVNT.48457158._000001.pool.root.1
[2026-03-05 19:06:52] -rw-r--r-- 2 boinc boinc    597950 Mar  5 17:33 input.tar.gz
[2026-03-05 19:06:52] -rw-r--r-- 2 boinc boinc     15845 Mar  5 17:33 start_atlas.sh
[2026-03-05 19:06:52] drwxrwx--x 2 boinc boinc      4096 Mar  5 17:33 shared
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc         0 Mar  5 17:33 boinc_lockfile
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc      2608 Mar  5 17:33 pandaJob.out
[2026-03-05 19:06:52] -rw------- 1 boinc boinc    998462 Mar  5 17:34 agis_schedconf.cvmfs.json
[2026-03-05 19:06:52] -rw------- 1 boinc boinc   1521291 Mar  5 17:35 agis_ddmendpoints.agis.ALL.json
[2026-03-05 19:06:52] -rw------- 1 boinc boinc       414 Mar  5 17:35 workernode_map.json
[2026-03-05 19:06:52] drwx------ 5 boinc boinc      4096 Mar  5 17:35 pilot3
[2026-03-05 19:06:52] -rw------- 1 boinc boinc 211920913 Mar  5 19:05 HITS.48849456._000022.pool.root.1
[2026-03-05 19:06:52] -rw------- 1 boinc boinc        95 Mar  5 19:05 pilot_heartbeat.json
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc       529 Mar  5 19:05 boinc_task_state.xml
[2026-03-05 19:06:52] -rw------- 1 boinc boinc      1021 Mar  5 19:05 memory_monitor_summary.json
[2026-03-05 19:06:52] -rw------- 1 boinc boinc    409984 Mar  5 19:05 log.48849456._000022.job.log.tgz.1
[2026-03-05 19:06:52] -rw------- 1 boinc boinc      6268 Mar  5 19:05 heartbeat.json
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc      8192 Mar  5 19:06 boinc_mmap_file
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc        27 Mar  5 19:06 wrapper_checkpoint.txt
[2026-03-05 19:06:52] -rw------- 1 boinc boinc      5009 Mar  5 19:06 pilotlog.txt
[2026-03-05 19:06:52] -rw------- 1 boinc boinc    770755 Mar  5 19:06 log.48849456._000022.job.log.1
[2026-03-05 19:06:52] -rw------- 1 boinc boinc       357 Mar  5 19:06 output.list
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc       620 Mar  5 19:06 runtime_log
[2026-03-05 19:06:52] -rw------- 1 boinc boinc   1198080 Mar  5 19:06 result.tar.gz
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc      8857 Mar  5 19:06 runtime_log.err
[2026-03-05 19:06:52] -rw------- 1 boinc boinc       637 Mar  5 19:06 nWqLDmh6eH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBhGLDml4BjVo.diag
[2026-03-05 19:06:52] -rw-r--r-- 1 boinc boinc     21846 Mar  5 19:06 stderr.txt
[2026-03-05 19:06:52] HITS file was successfully produced:
[2026-03-05 19:06:52] -rw------- 1 boinc boinc 211920913 Mar  5 19:05 shared/HITS.pool.root.1
[2026-03-05 19:06:52]  *** Contents of shared directory: ***
[2026-03-05 19:06:52] total 471480
[2026-03-05 19:06:52] -rw-r--r-- 2 boinc boinc 269049410 Mar  5 17:33 ATLAS.root_0
[2026-03-05 19:06:52] -rw-r--r-- 2 boinc boinc    597950 Mar  5 17:33 input.tar.gz
[2026-03-05 19:06:52] -rw-r--r-- 2 boinc boinc     15845 Mar  5 17:33 start_atlas.sh
[2026-03-05 19:06:52] -rw------- 1 boinc boinc 211920913 Mar  5 19:05 HITS.pool.root.1
[2026-03-05 19:06:52] -rw------- 1 boinc boinc   1198080 Mar  5 19:06 result.tar.gz
19:06:54 (2308287): run_atlas exited; CPU time 56991.359631
19:06:54 (2308287): called boinc_finish(0)

</stderr_txt>
]]>

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