Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:02:07 (3931946): wrapper (7.7.26015): starting
19:02:07 (3931946): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 19:02:07] Arguments: --nthreads 8
[2026-03-03 19:02:07] Threads: 8
[2026-03-03 19:02:07] Checking for CVMFS
[2026-03-03 19:02:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 19:02:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 19:02:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 19:02:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 19:02:07] 2.13.3.0 11323 170424 558104 156862 0 296 22700625 32935937 19233 16776704 0 566012379 99.521 787886367 38875 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-03 19:02:07] CVMFS is ok
[2026-03-03 19:02:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 19:02:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 19:02:07] Further information can be found at the LHC@home message board.
[2026-03-03 19:02:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 19:02:07] Checking for apptainer binary...
[2026-03-03 19:02:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 19:02:07] Running /usr/bin/apptainer --version
[2026-03-03 19:02:07] apptainer version 1.4.5-2.el9
[2026-03-03 19:02:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 19:02:07] c6-4-5-3.aglt2.org
[2026-03-03 19:02:07] apptainer works
[2026-03-03 19:02:07] Set ATHENA_PROC_NUMBER=8
[2026-03-03 19:02:07] Set ATHENA_CORE_NUMBER=8
[2026-03-03 19:02:07] Starting ATLAS job with PandaID=7036646047
[2026-03-03 19:02:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 21:24:07]  *** The last 200 lines of the pilot log: ***
[2026-03-03 21:24:07] 2026-03-04 02:23:34,245 | INFO     | mean x: 1772586798.0143886
[2026-03-03 21:24:07] 2026-03-04 02:23:34,245 | INFO     | mean y: 2479630.071942446
[2026-03-03 21:24:07] 2026-03-04 02:23:34,246 | INFO     | intersect: -38572044758.28641
[2026-03-03 21:24:07] 2026-03-04 02:23:34,246 | INFO     | chi2: 2.4011117545833445
[2026-03-03 21:24:07] 2026-03-04 02:23:34,246 | INFO     | sum of square deviations: 746051687.4701473
[2026-03-03 21:24:07] 2026-03-04 02:23:34,247 | INFO     | sum of deviations: 26578482164.947777
[2026-03-03 21:24:07] 2026-03-04 02:23:34,247 | INFO     | mean x: 1772586645.5149255
[2026-03-03 21:24:07] 2026-03-04 02:23:34,247 | INFO     | mean y: 2494032.276119403
[2026-03-03 21:24:07] 2026-03-04 02:23:34,247 | INFO     | intersect: -63146833735.35021
[2026-03-03 21:24:07] 2026-03-04 02:23:34,247 | INFO     | chi2: 1.6257616914963615
[2026-03-03 21:24:07] 2026-03-04 02:23:34,247 | INFO     | current chi2=1.6257616914963615 (change=32.29129429760867 %)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,248 | INFO     | sum of square deviations: 665613579.9689934
[2026-03-03 21:24:07] 2026-03-04 02:23:34,248 | INFO     | sum of deviations: 25543961379.054256
[2026-03-03 21:24:07] 2026-03-04 02:23:34,248 | INFO     | mean x: 1772586493.015504
[2026-03-03 21:24:07] 2026-03-04 02:23:34,248 | INFO     | mean y: 2492069.472868217
[2026-03-03 21:24:07] 2026-03-04 02:23:34,248 | INFO     | intersect: -68023284869.64924
[2026-03-03 21:24:07] 2026-03-04 02:23:34,249 | INFO     | chi2: 1.6265434750858534
[2026-03-03 21:24:07] 2026-03-04 02:23:34,249 | INFO     | current chi2=1.6265434750858534 (change=-0.048087219275804276 %)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,249 | INFO     | right removable region: 128
[2026-03-03 21:24:07] 2026-03-04 02:23:34,249 | INFO     | sum of square deviations: 746050467.4701473
[2026-03-03 21:24:07] 2026-03-04 02:23:34,250 | INFO     | sum of deviations: -5702232633.970148
[2026-03-03 21:24:07] 2026-03-04 02:23:34,250 | INFO     | mean x: 1772586950.5149255
[2026-03-03 21:24:07] 2026-03-04 02:23:34,250 | INFO     | mean y: 2521005.9850746267
[2026-03-03 21:24:07] 2026-03-04 02:23:34,250 | INFO     | intersect: 13550804394.977509
[2026-03-03 21:24:07] 2026-03-04 02:23:34,250 | INFO     | chi2: 0.8433587060965697
[2026-03-03 21:24:07] 2026-03-04 02:23:34,250 | INFO     | current chi2=0.8433587060965697 (change=64.87632429074863 %)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,250 | INFO     | sum of square deviations: 665611139.9689934
[2026-03-03 21:24:07] 2026-03-04 02:23:34,251 | INFO     | sum of deviations: -8287499393.620154
[2026-03-03 21:24:07] 2026-03-04 02:23:34,251 | INFO     | mean x: 1772587103.015504
[2026-03-03 21:24:07] 2026-03-04 02:23:34,251 | INFO     | mean y: 2525803.310077519
[2026-03-03 21:24:07] 2026-03-04 02:23:34,251 | INFO     | intersect: 22072941484.850838
[2026-03-03 21:24:07] 2026-03-04 02:23:34,252 | INFO     | chi2: 0.8130250908450399
[2026-03-03 21:24:07] 2026-03-04 02:23:34,252 | INFO     | current chi2=0.8130250908450399 (change=3.5967631604737824 %)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,252 | INFO     | left removable region: 20
[2026-03-03 21:24:07] 2026-03-04 02:23:34,252 | INFO     | sum of square deviations: 390588612.99074095
[2026-03-03 21:24:07] 2026-03-04 02:23:34,252 | INFO     | sum of deviations: 1613717695.0925927
[2026-03-03 21:24:07] 2026-03-04 02:23:34,252 | INFO     | mean x: 1772587072.5092592
[2026-03-03 21:24:07] 2026-03-04 02:23:34,253 | INFO     | mean y: 2540378.907407407
[2026-03-03 21:24:07] 2026-03-04 02:23:34,253 | INFO     | intersect: -7320906925.656938
[2026-03-03 21:24:07] 2026-03-04 02:23:34,253 | INFO     | chi2: 0.0005386453421873423
[2026-03-03 21:24:07] 2026-03-04 02:23:34,253 | INFO     | current memory leak: 4.13 B/s (using 108 data points, chi2=0.00)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,253 | INFO     | could have reported an average CPU frequency of 3058 MHz (8 samples)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | ..............................
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . Timing measurements:
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . get job = 0 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . initial setup = 12 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . payload setup = 8 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . stage-in = 0 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . payload execution = 8429 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . stage-out = 1 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | . log creation = 0 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,254 | INFO     | ..............................
[2026-03-03 21:24:07] 2026-03-04 02:23:34,370 | INFO     | 
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | job summary report
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | --------------------------------------------------
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | PanDA job id: 7036646047
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | task id: 48838586
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | errors: (none)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | pilot state: finished 
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | transexitcode: 0
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | exeerrorcode: 0
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | exeerrordiag: 
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | exitcode: 0
[2026-03-03 21:24:07] 2026-03-04 02:23:34,371 | INFO     | exitmsg: OK
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | cpuconsumptiontime: 44501 s
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | nevents: 400
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | neventsw: 0
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | pid: 3940952
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | pgrp: 3940952
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | corecount: 8
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | event service: False
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | sizes: {0: 2286817, 1: 2287051, 11: 2287051, 8442: 2315371, 8443: 2315370, 8444: 2324424, 8445: 2324802}
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | --------------------------------------------------
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | 
[2026-03-03 21:24:07] 2026-03-04 02:23:34,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-03-03 21:24:07] 2026-03-04 02:23:34,398 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,398 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,398 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,398 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,398 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,399 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 21:24:07] 2026-03-04 02:23:34,400 | INFO     | job 7036646047 has completed (purged errors)
[2026-03-03 21:24:07] 2026-03-04 02:23:34,400 | INFO     | overall cleanup function is called
[2026-03-03 21:24:07] 2026-03-04 02:23:35,410 | INFO     | --- collectZombieJob: --- 10, [3940952]
[2026-03-03 21:24:07] 2026-03-04 02:23:35,410 | INFO     | zombie collector waiting for pid 3940952
[2026-03-03 21:24:07] 2026-03-04 02:23:35,410 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 21:24:07] 2026-03-04 02:23:35,410 | INFO     | collected zombie processes
[2026-03-03 21:24:07] 2026-03-04 02:23:35,410 | INFO     | will attempt to kill all subprocesses of pid=3940952
[2026-03-03 21:24:07] 2026-03-04 02:23:35,906 | INFO     | process IDs to be killed: [3940952] (in reverse order)
[2026-03-03 21:24:07] 2026-03-04 02:23:36,024 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 21:24:07] 2026-03-04 02:23:36,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 21:24:07] 2026-03-04 02:23:36,038 | INFO     | did not find any defunct processes belonging to 3940952
[2026-03-03 21:24:07] 2026-03-04 02:23:36,052 | INFO     | did not find any defunct processes belonging to 3940952
[2026-03-03 21:24:07] 2026-03-04 02:23:36,052 | INFO     | ready for new job
[2026-03-03 21:24:07] 2026-03-04 02:23:36,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 21:24:07] 2026-03-04 02:23:36,054 | INFO     | **************************************
[2026-03-03 21:24:07] 2026-03-04 02:23:36,054 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 21:24:07] 2026-03-04 02:23:36,054 | INFO     | **************************************
[2026-03-03 21:24:07] 2026-03-04 02:23:36,055 | INFO     | 
[2026-03-03 21:24:07] 2026-03-04 02:23:36,058 | INFO     | architecture information:
[2026-03-03 21:24:07] 2026-03-04 02:23:36,058 | INFO     | executing command: cat /etc/os-release
[2026-03-03 21:24:07] 2026-03-04 02:23:36,075 | INFO     | cat /etc/os-release:
[2026-03-03 21:24:07] NAME="CentOS Linux"
[2026-03-03 21:24:07] VERSION="7 (Core)"
[2026-03-03 21:24:07] ID="centos"
[2026-03-03 21:24:07] ID_LIKE="rhel fedora"
[2026-03-03 21:24:07] VERSION_ID="7"
[2026-03-03 21:24:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 21:24:07] ANSI_COLOR="0;31"
[2026-03-03 21:24:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 21:24:07] HOME_URL="https://www.centos.org/"
[2026-03-03 21:24:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 21:24:07] 
[2026-03-03 21:24:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 21:24:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 21:24:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 21:24:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 21:24:07] 
[2026-03-03 21:24:07] 2026-03-04 02:23:36,076 | INFO     | **************************************
[2026-03-03 21:24:07] 2026-03-04 02:23:36,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-03 21:24:07] 2026-03-04 02:23:36,690 | INFO     | sufficient remaining disk space (72074919936 B)
[2026-03-03 21:24:07] 2026-03-04 02:23:36,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 21:24:07] 2026-03-04 02:23:36,690 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 21:24:07] 2026-03-04 02:23:36,691 | INFO     | update_server=False
[2026-03-03 21:24:07] 2026-03-04 02:23:36,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 21:24:07] 2026-03-04 02:23:36,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 21:24:07] 2026-03-04 02:23:36,710 | INFO     | all data control threads have been joined
[2026-03-03 21:24:07] 2026-03-04 02:23:37,673 | INFO     | all payload control threads have been joined
[2026-03-03 21:24:07] 2026-03-04 02:23:37,697 | INFO     | [job] retrieve thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:37,719 | INFO     | [data] control thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:37,785 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:37,802 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:37,836 | INFO     | all job control threads have been joined
[2026-03-03 21:24:07] 2026-03-04 02:23:38,495 | WARNING  | process 3940952 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 21:24:07] 2026-03-04 02:23:38,497 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:38,623 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:38,689 | INFO     | [payload] control thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:38,702 | INFO     | [data] copytool_out thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:38,765 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 21:24:07] 2026-03-04 02:23:38,766 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 21:24:07] 2026-03-04 02:23:38,766 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 21:24:07] 2026-03-04 02:23:38,766 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 21:24:07] 2026-03-04 02:23:38,767 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/4/PanDA_Pilot-7036646047/payload.stdout) since it has not been created yet
[2026-03-03 21:24:07] 2026-03-04 02:23:38,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-03-03 21:24:07] 2026-03-04 02:23:38,782 | INFO     | sufficient remaining disk space (72074919936 B)
[2026-03-03 21:24:07] 2026-03-04 02:23:38,782 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 21:24:07] 2026-03-04 02:23:38,782 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/4/PanDA_Pilot-7036646047/HITS.48838586._003435.pool.root.1 since it does not exist
[2026-03-03 21:24:07] 2026-03-04 02:23:38,844 | INFO     | [job] control thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:38,854 | INFO     | [data] copytool_in thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:39,111 | INFO     | [job] validate thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:39,141 | INFO     | number of running child processes to parent process 3940952: 1
[2026-03-03 21:24:07] 2026-03-04 02:23:39,141 | INFO     | maximum number of monitored processes: 6
[2026-03-03 21:24:07] 2026-03-04 02:23:39,141 | INFO     | aborting job monitoring since job object (job id=7036646047) has expired
[2026-03-03 21:24:07] 2026-03-04 02:23:39,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:24:07] 2026-03-04 02:23:39,141 | INFO     | will abort loop
[2026-03-03 21:24:07] 2026-03-04 02:23:39,163 | INFO     | [payload] failed_post thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:39,276 | INFO     | [payload] validate_post thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:39,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:24:07] 2026-03-04 02:23:39,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 21:24:07] 2026-03-04 02:23:40,147 | INFO     | [job] job monitor thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:40,392 | INFO     | [job] queue monitor thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:43,769 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 21:24:07] 2026-03-04 02:23:51,756 | INFO     | [monitor] cgroup control has ended
[2026-03-03 21:24:07] 2026-03-04 02:23:52,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139670907844416)>', '<ExcThread(monitor, started 139670407059200)>']
[2026-03-03 21:24:07] 2026-03-04 02:23:57,822 | INFO     | all workflow threads have been joined
[2026-03-03 21:24:07] 2026-03-04 02:23:57,822 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 21:24:07] 2026-03-04 02:23:57,822 | INFO     | traces error code: 0
[2026-03-03 21:24:07] 2026-03-04 02:23:57,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 21:24:07] 2026-03-04 02:24:07,208 | INFO     | PID=3936084 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 21:24:07] 2026-03-04 02:24:07,209 | INFO     | .. there are 28 such processes running
[2026-03-03 21:24:07] 2026-03-04 02:24:07,209 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 21:24:07] 2026-03-04 02:24:07,210 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 21:24:07] 2026-03-04 02:24:07,210 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 21:24:07] 2026-03-04 02:24:07,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 21:24:07] 2026-03-04 02:24:07,210 | INFO     | [monitor] control thread has ended
[2026-03-03 21:24:07] 2026-03-04 02:24:07,371 [wrapper] ==== pilot stdout END ====
[2026-03-03 21:24:07] 2026-03-04 02:24:07,390 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 21:24:07] 2026-03-04 02:24:07,405 [wrapper] pilotpid: 3936084
[2026-03-03 21:24:07] 2026-03-04 02:24:07,431 [wrapper] Pilot exit status: 0
[2026-03-03 21:24:07] 2026-03-04 02:24:07,499 [wrapper] pandaids: 7036646047
[2026-03-03 21:24:07] 2026-03-04 02:24:07,645 [wrapper] cleanup supervisor_pilot  313472 3936085
[2026-03-03 21:24:07] 2026-03-04 02:24:07,653 [wrapper] Test setup, not cleaning
[2026-03-03 21:24:07] 2026-03-04 02:24:07,658 [wrapper] apfmon messages muted
[2026-03-03 21:24:07] 2026-03-04 02:24:07,660 [wrapper] ==== wrapper stdout END ====
[2026-03-03 21:24:07] 2026-03-04 02:24:07,662 [wrapper] ==== wrapper stderr END ====
[2026-03-03 21:24:07]  *** Error codes and diagnostics ***
[2026-03-03 21:24:07]     "exeErrorCode": 0,
[2026-03-03 21:24:07]     "exeErrorDiag": "",
[2026-03-03 21:24:07]     "pilotErrorCode": 0,
[2026-03-03 21:24:07]     "pilotErrorDiag": "",
[2026-03-03 21:24:07]  *** Listing of results directory ***
[2026-03-03 21:24:07] total 484592
[2026-03-03 21:24:07] -rwx------. 1 boincer umatlas     36322 Mar  3 16:19 runpilot2-wrapper.sh
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 16:22 queuedata.json
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 16:23 pilot3.tar.gz
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas       100 Mar  3 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 21:24:07] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 19:02 run_atlas
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas       105 Mar  3 19:02 job.xml
[2026-03-03 21:24:07] -rw-r--r--. 2 boincer umatlas 277443639 Mar  3 19:02 EVNT.48220221._000139.pool.root.1
[2026-03-03 21:24:07] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 19:02 start_atlas.sh
[2026-03-03 21:24:07] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 19:02 shared
[2026-03-03 21:24:07] -rw-r--r--. 2 boincer umatlas    597958 Mar  3 19:02 input.tar.gz
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas         0 Mar  3 19:02 boinc_lockfile
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas      2562 Mar  3 19:02 pandaJob.out
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas        57 Mar  3 19:02 setup.sh.local
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas    998484 Mar  3 19:02 agis_schedconf.cvmfs.json
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas   1516092 Mar  3 19:02 agis_ddmendpoints.agis.ALL.json
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas       437 Mar  3 19:02 workernode_map.json
[2026-03-03 21:24:07] drwx------. 5 boincer umatlas      4096 Mar  3 19:02 pilot3
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas      6873 Mar  3 21:20 init_data.xml
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas       530 Mar  3 21:22 boinc_task_state.xml
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas 211740792 Mar  3 21:22 HITS.48838586._003435.pool.root.1
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas      1051 Mar  3 21:23 memory_monitor_summary.json
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas    381578 Mar  3 21:23 log.48838586._003435.job.log.tgz.1
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas      6374 Mar  3 21:23 heartbeat.json
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas        27 Mar  3 21:24 wrapper_checkpoint.txt
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 21:24 boinc_mmap_file
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas        95 Mar  3 21:24 pilot_heartbeat.json
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas       823 Mar  3 21:24 pilotlog.txt
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas   1172011 Mar  3 21:24 log.48838586._003435.job.log.1
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas       357 Mar  3 21:24 output.list
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas       620 Mar  3 21:24 runtime_log
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas   1566720 Mar  3 21:24 result.tar.gz
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas       652 Mar  3 21:24 0v9LDmtKmH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvrHLDm6PTeum.diag
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas      9341 Mar  3 21:24 runtime_log.err
[2026-03-03 21:24:07] -rw-r--r--. 1 boincer umatlas     21512 Mar  3 21:24 stderr.txt
[2026-03-03 21:24:07] HITS file was successfully produced:
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas 211740792 Mar  3 21:22 shared/HITS.pool.root.1
[2026-03-03 21:24:07]  *** Contents of shared directory: ***
[2026-03-03 21:24:07] total 479860
[2026-03-03 21:24:07] -rw-r--r--. 2 boincer umatlas 277443639 Mar  3 19:02 ATLAS.root_0
[2026-03-03 21:24:07] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 19:02 start_atlas.sh
[2026-03-03 21:24:07] -rw-r--r--. 2 boincer umatlas    597958 Mar  3 19:02 input.tar.gz
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas 211740792 Mar  3 21:22 HITS.pool.root.1
[2026-03-03 21:24:07] -rw-------. 1 boincer umatlas   1566720 Mar  3 21:24 result.tar.gz
21:24:09 (3931946): run_atlas exited; CPU time 44786.454449
21:24:09 (3931946): called boinc_finish(0)

</stderr_txt>
]]>

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