Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:25:47 (4029911): wrapper (7.7.26015): starting
07:25:47 (4029911): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 07:25:47] Arguments: --nthreads 4
[2026-03-04 07:25:47] Threads: 4
[2026-03-04 07:25:47] Checking for CVMFS
[2026-03-04 07:25:47] No cvmfs_config command found, will try listing directly
[2026-03-04 07:25:47] CVMFS is ok
[2026-03-04 07:25:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 07:25:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 07:25:47] Further information can be found at the LHC@home message board.
[2026-03-04 07:25:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:25:47] Checking for apptainer binary...
[2026-03-04 07:25:47] which: no apptainer in ((null))
[2026-03-04 07:25:47] apptainer is not installed, using version from CVMFS
[2026-03-04 07:25:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:25:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-04 07:25:47] apptainer works
[2026-03-04 07:25:47] Set ATHENA_PROC_NUMBER=4
[2026-03-04 07:25:47] Set ATHENA_CORE_NUMBER=4
[2026-03-04 07:25:47] Starting ATLAS job with PandaID=7036646104
[2026-03-04 07:25:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 09:08:50]  *** The last 200 lines of the pilot log: ***
[2026-03-04 09:08:50] 2026-03-04 08:07:35,441 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,441 | INFO     | log transfer has been attempted: DONE
[2026-03-04 09:08:50] 2026-03-04 08:07:35,441 | INFO     | job 7036646104 has finished - writing final server update
[2026-03-04 09:08:50] 2026-03-04 08:07:35,441 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19507/.job.ad'
[2026-03-04 09:08:50] 2026-03-04 08:07:35,441 | INFO     | total number of processed events: 400 (read)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,459 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036646104/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,460 | INFO     | extracted standard info from prmon json
[2026-03-04 09:08:50] 2026-03-04 08:07:35,460 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 09:08:50] 2026-03-04 08:07:35,460 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 09:08:50] 2026-03-04 08:07:35,460 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 09:08:50] 2026-03-04 08:07:35,460 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 09:08:50] 2026-03-04 08:07:35,461 | INFO     | fitting pss+swap vs Time
[2026-03-04 09:08:50] 2026-03-04 08:07:35,461 | INFO     | sum of square deviations: 310052325.0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | sum of deviations: 9508109863.499998
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | mean x: 1772608600.5
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | mean y: 2319924.37
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | intersect: -54356754204.61444
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | chi2: 1.1166632506884508
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | sum of square deviations: 265828240.0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | sum of deviations: 8983395701.999998
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | mean x: 1772608448.0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | mean y: 2318113.484210526
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | intersect: -59901186168.42387
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | chi2: 1.1187626168693943
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | current chi2=1.1187626168693943 (change=-0.18800351669575466 %)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,462 | INFO     | right removable region: 94
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | sum of square deviations: 265828240.0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | sum of deviations: -202543484.99999997
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | mean x: 1772608753.0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | mean y: 2352344.789473684
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | intersect: 1352962627.4822536
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | chi2: 0.000709495608301927
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | current chi2=0.000709495608301927 (change=99.93646288548813 %)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | sum of square deviations: 226022842.5
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | sum of deviations: -323874376.0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | mean x: 1772608905.5
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | mean y: 2352805.533333333
[2026-03-04 09:08:50] 2026-03-04 08:07:35,463 | INFO     | intersect: 2542373083.177861
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | chi2: 0.0005780918291007857
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | current chi2=0.0005780918291007857 (change=18.520731864096643 %)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | left removable region: 20
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | sum of square deviations: 125630262.5
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | sum of deviations: -223167676.49999997
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | mean x: 1772609027.5
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | mean y: 2351994.2027027025
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | intersect: 3151187554.5048995
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | chi2: 0.0004901846882576832
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | current memory leak: -1.78 B/s (using 74 data points, chi2=0.00)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | could have reported an average CPU frequency of 3621 MHz (7 samples)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | ..............................
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | . Timing measurements:
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | . get job = 0 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | . initial setup = 5 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | . payload setup = 4 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,464 | INFO     | . stage-in = 0 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,465 | INFO     | . payload execution = 6072 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,465 | INFO     | . stage-out = 0 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,465 | INFO     | . log creation = 0 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,465 | INFO     | ..............................
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | 
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | job summary report
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | --------------------------------------------------
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | PanDA job id: 7036646104
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | task id: 48838586
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | errors: (none)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | pilot state: finished 
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | transexitcode: 0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | exeerrorcode: 0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | exeerrordiag: 
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | exitcode: 0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | exitmsg: OK
[2026-03-04 09:08:50] 2026-03-04 08:07:35,697 | INFO     | cpuconsumptiontime: 22702 s
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | nevents: 400
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | neventsw: 0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | pid: 4058835
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | pgrp: 4058835
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | corecount: 4
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | event service: False
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | sizes: {0: 2286659, 1: 2287063, 11: 2287063, 6080: 2314146, 6081: 2314145, 6082: 2323223, 6084: 2323601}
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | --------------------------------------------------
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | 
[2026-03-04 09:08:50] 2026-03-04 08:07:35,698 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-04 09:08:50] 2026-03-04 08:07:35,715 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | job 7036646104 has completed (purged errors)
[2026-03-04 09:08:50] 2026-03-04 08:07:35,716 | INFO     | overall cleanup function is called
[2026-03-04 09:08:50] 2026-03-04 08:07:36,723 | INFO     | --- collectZombieJob: --- 10, [4058835]
[2026-03-04 09:08:50] 2026-03-04 08:07:36,723 | INFO     | zombie collector waiting for pid 4058835
[2026-03-04 09:08:50] 2026-03-04 08:07:36,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 09:08:50] 2026-03-04 08:07:36,723 | INFO     | collected zombie processes
[2026-03-04 09:08:50] 2026-03-04 08:07:36,723 | INFO     | will attempt to kill all subprocesses of pid=4058835
[2026-03-04 09:08:50] 2026-03-04 08:07:37,223 | INFO     | process IDs to be killed: [4058835] (in reverse order)
[2026-03-04 09:08:50] 2026-03-04 08:07:37,448 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 09:08:50] 2026-03-04 08:07:37,448 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 09:08:50] 2026-03-04 08:07:37,483 | INFO     | did not find any defunct processes belonging to 4058835
[2026-03-04 09:08:50] 2026-03-04 08:07:37,514 | INFO     | did not find any defunct processes belonging to 4058835
[2026-03-04 09:08:50] 2026-03-04 08:07:37,514 | INFO     | ready for new job
[2026-03-04 09:08:50] 2026-03-04 08:07:37,514 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 09:08:50] 2026-03-04 08:07:37,516 | INFO     | **************************************
[2026-03-04 09:08:50] 2026-03-04 08:07:37,516 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 09:08:50] 2026-03-04 08:07:37,516 | INFO     | **************************************
[2026-03-04 09:08:50] 2026-03-04 08:07:37,516 | INFO     | 
[2026-03-04 09:08:50] 2026-03-04 08:07:37,523 | INFO     | architecture information:
[2026-03-04 09:08:50] 2026-03-04 08:07:37,523 | INFO     | executing command: cat /etc/os-release
[2026-03-04 09:08:50] 2026-03-04 08:07:37,537 | INFO     | cat /etc/os-release:
[2026-03-04 09:08:50] NAME="CentOS Linux"
[2026-03-04 09:08:50] VERSION="7 (Core)"
[2026-03-04 09:08:50] ID="centos"
[2026-03-04 09:08:50] ID_LIKE="rhel fedora"
[2026-03-04 09:08:50] VERSION_ID="7"
[2026-03-04 09:08:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 09:08:50] ANSI_COLOR="0;31"
[2026-03-04 09:08:50] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 09:08:50] HOME_URL="https://www.centos.org/"
[2026-03-04 09:08:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 09:08:50] 
[2026-03-04 09:08:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 09:08:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 09:08:50] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 09:08:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 09:08:50] 
[2026-03-04 09:08:50] 2026-03-04 08:07:37,537 | INFO     | **************************************
[2026-03-04 09:08:50] 2026-03-04 08:07:38,040 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-04 09:08:50] 2026-03-04 08:07:38,056 | INFO     | sufficient remaining disk space (21030240256 B)
[2026-03-04 09:08:50] 2026-03-04 08:07:38,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 09:08:50] 2026-03-04 08:07:38,056 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 09:08:50] 2026-03-04 08:07:38,056 | INFO     | update_server=False
[2026-03-04 09:08:50] 2026-03-04 08:07:38,056 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 09:08:50] 2026-03-04 08:07:38,491 | INFO     | all data control threads have been joined
[2026-03-04 09:08:50] 2026-03-04 08:07:38,695 | WARNING  | process 4058835 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 09:08:50] 2026-03-04 08:07:38,788 | INFO     | all job control threads have been joined
[2026-03-04 09:08:50] 2026-03-04 08:07:38,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 09:08:50] 2026-03-04 08:07:39,053 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 09:08:50] 2026-03-04 08:07:39,061 | INFO     | [job] retrieve thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:39,085 | INFO     | all payload control threads have been joined
[2026-03-04 09:08:50] 2026-03-04 08:07:39,150 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:39,224 | INFO     | [payload] validate_post thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:39,496 | INFO     | [data] control thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:39,561 | INFO     | number of running child processes to parent process 4058835: 1
[2026-03-04 09:08:50] 2026-03-04 08:07:39,562 | INFO     | maximum number of monitored processes: 6
[2026-03-04 09:08:50] 2026-03-04 08:07:39,562 | INFO     | aborting job monitoring since job object (job id=7036646104) has expired
[2026-03-04 09:08:50] 2026-03-04 08:07:39,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:08:50] 2026-03-04 08:07:39,562 | INFO     | will abort loop
[2026-03-04 09:08:50] 2026-03-04 08:07:39,793 | INFO     | [job] control thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,091 | INFO     | [payload] control thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,274 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,448 | INFO     | [payload] failed_post thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,486 | INFO     | [job] validate thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:08:50] 2026-03-04 08:07:40,554 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,555 | INFO     | [data] copytool_in thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,567 | INFO     | [job] job monitor thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:40,855 | INFO     | [data] copytool_out thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:41,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 09:08:50] 2026-03-04 08:07:41,533 | INFO     | [job] queue monitor thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:45,450 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:07:48,773 | INFO     | job.realtimelogging is not enabled
[2026-03-04 09:08:50] 2026-03-04 08:07:49,778 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 09:08:50] 2026-03-04 08:08:08,489 | INFO     | PID=4040486 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 09:08:50] 2026-03-04 08:08:08,489 | INFO     | .. there are 41 such processes running
[2026-03-04 09:08:50] 2026-03-04 08:08:08,489 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 09:08:50] 2026-03-04 08:08:08,489 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 09:08:50] 2026-03-04 08:08:08,489 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 09:08:50] 2026-03-04 08:08:10,198 | INFO     | [monitor] cgroup control has ended
[2026-03-04 09:08:50] 2026-03-04 08:08:12,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22727650527040)>', '<ExcThread(monitor, started 22727412168448)>']
[2026-03-04 09:08:50] 2026-03-04 08:08:12,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 09:08:50] 2026-03-04 08:08:12,509 | INFO     | [monitor] control thread has ended
[2026-03-04 09:08:50] 2026-03-04 08:08:17,262 | INFO     | all workflow threads have been joined
[2026-03-04 09:08:50] 2026-03-04 08:08:17,262 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 09:08:50] 2026-03-04 08:08:17,262 | INFO     | traces error code: 0
[2026-03-04 09:08:50] 2026-03-04 08:08:17,262 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 09:08:50] 2026-03-04 08:08:17,451 [wrapper] ==== pilot stdout END ====
[2026-03-04 09:08:50] 2026-03-04 08:08:17,456 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 09:08:50] 2026-03-04 08:08:17,458 [wrapper] pilotpid: 4040486
[2026-03-04 09:08:50] 2026-03-04 08:08:17,460 [wrapper] Pilot exit status: 0
[2026-03-04 09:08:50] 2026-03-04 08:08:17,469 [wrapper] pandaids: 7036646104
[2026-03-04 09:08:50] 2026-03-04 08:08:17,614 [wrapper] cleanup supervisor_pilot  634512 4040487
[2026-03-04 09:08:50] 2026-03-04 08:08:17,618 [wrapper] Test setup, not cleaning
[2026-03-04 09:08:50] 2026-03-04 08:08:17,620 [wrapper] apfmon messages muted
[2026-03-04 09:08:50] 2026-03-04 08:08:17,622 [wrapper] ==== wrapper stdout END ====
[2026-03-04 09:08:50] 2026-03-04 08:08:17,623 [wrapper] ==== wrapper stderr END ====
[2026-03-04 09:08:50]  *** Error codes and diagnostics ***
[2026-03-04 09:08:50]     "exeErrorCode": 0,
[2026-03-04 09:08:50]     "exeErrorDiag": "",
[2026-03-04 09:08:50]     "pilotErrorCode": 0,
[2026-03-04 09:08:50]     "pilotErrorDiag": "",
[2026-03-04 09:08:50]  *** Listing of results directory ***
[2026-03-04 09:08:50] total 485892
[2026-03-04 09:08:50] -rwx------. 1 boinc boinc     36322 Mar  3 22:19 runpilot2-wrapper.sh
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc    584627 Mar  3 22:23 pilot3.tar.gz
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc      5111 Mar  3 22:24 queuedata.json
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc       100 Mar  4 07:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 09:08:50] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 07:25 run_atlas
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc       105 Mar  4 07:25 job.xml
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc      6703 Mar  4 07:25 init_data.xml
[2026-03-04 09:08:50] -rw-r--r--. 2 boinc boinc 278489537 Mar  4 07:25 EVNT.48220221._000141.pool.root.1
[2026-03-04 09:08:50] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:25 start_atlas.sh
[2026-03-04 09:08:50] drwxrwx--x. 2 boinc boinc      4096 Mar  4 07:25 shared
[2026-03-04 09:08:50] -rw-r--r--. 2 boinc boinc    597953 Mar  4 07:25 input.tar.gz
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc         0 Mar  4 07:25 boinc_lockfile
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc      2562 Mar  4 07:25 pandaJob.out
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc    997749 Mar  4 07:25 agis_schedconf.cvmfs.json
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc   1516092 Mar  4 07:25 agis_ddmendpoints.agis.ALL.json
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc       442 Mar  4 07:25 workernode_map.json
[2026-03-04 09:08:50] drwx------. 5 boinc boinc      4096 Mar  4 07:26 pilot3
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc 212793443 Mar  4 09:07 HITS.48838586._003492.pool.root.1
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc      1028 Mar  4 09:07 memory_monitor_summary.json
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc    292707 Mar  4 09:07 log.48838586._003492.job.log.tgz.1
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc       528 Mar  4 09:07 boinc_task_state.xml
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc      6349 Mar  4 09:07 heartbeat.json
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc        95 Mar  4 09:07 pilot_heartbeat.json
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc      5435 Mar  4 09:08 pilotlog.txt
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc    873724 Mar  4 09:08 log.48838586._003492.job.log.1
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc       357 Mar  4 09:08 output.list
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc       620 Mar  4 09:08 runtime_log
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc   1187840 Mar  4 09:08 result.tar.gz
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc      9221 Mar  4 09:08 runtime_log.err
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc       662 Mar  4 09:08 i3WLDm0KmH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTpFLDmGuOJLm.diag
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc        26 Mar  4 09:08 wrapper_checkpoint.txt
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc      8192 Mar  4 09:08 boinc_mmap_file
[2026-03-04 09:08:50] -rw-r--r--. 1 boinc boinc     21117 Mar  4 09:08 stderr.txt
[2026-03-04 09:08:50] HITS file was successfully produced:
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc 212793443 Mar  4 09:07 shared/HITS.pool.root.1
[2026-03-04 09:08:50]  *** Contents of shared directory: ***
[2026-03-04 09:08:50] total 481540
[2026-03-04 09:08:50] -rw-r--r--. 2 boinc boinc 278489537 Mar  4 07:25 ATLAS.root_0
[2026-03-04 09:08:50] -rw-r--r--. 2 boinc boinc     15845 Mar  4 07:25 start_atlas.sh
[2026-03-04 09:08:50] -rw-r--r--. 2 boinc boinc    597953 Mar  4 07:25 input.tar.gz
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc 212793443 Mar  4 09:07 HITS.pool.root.1
[2026-03-04 09:08:50] -rw-------. 1 boinc boinc   1187840 Mar  4 09:08 result.tar.gz
09:08:51 (4029911): run_atlas exited; CPU time 22986.247658
09:08:51 (4029911): called boinc_finish(0)

</stderr_txt>
]]>

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