Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:27:21 (2984232): wrapper (7.7.26015): starting
19:27:21 (2984232): wrapper: running run_atlas (--nthreads 11)
[2026-03-03 19:27:21] Arguments: --nthreads 11
[2026-03-03 19:27:21] Threads: 11
[2026-03-03 19:27:21] Checking for CVMFS
[2026-03-03 19:27:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 19:27:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 19:27:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 19:27:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 19:27:22] 2.13.3.0 7976 98550 424216 156863 0 58 31244039 40960001 8928 16776704 0 102588336 99.738 143797097 31146 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 19:27:22] CVMFS is ok
[2026-03-03 19:27:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 19:27:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 19:27:22] Further information can be found at the LHC@home message board.
[2026-03-03 19:27:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 19:27:22] Checking for apptainer binary...
[2026-03-03 19:27:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 19:27:22] Running /usr/bin/apptainer --version
[2026-03-03 19:27:22] apptainer version 1.4.5-2.el9
[2026-03-03 19:27:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 19:27:22] c-211-13.aglt2.org
[2026-03-03 19:27:22] apptainer works
[2026-03-03 19:27:22] Set ATHENA_PROC_NUMBER=11
[2026-03-03 19:27:22] Set ATHENA_CORE_NUMBER=11
[2026-03-03 19:27:22] Starting ATLAS job with PandaID=7036646958
[2026-03-03 19:27:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 21:26:57]  *** The last 200 lines of the pilot log: ***
[2026-03-03 21:26:57] 2026-03-04 02:26:02,526 | INFO     | log transfer has been attempted: DONE
[2026-03-03 21:26:57] 2026-03-04 02:26:02,526 | INFO     | job 7036646958 has finished - writing final server update
[2026-03-03 21:26:57] 2026-03-04 02:26:02,526 | INFO     | total number of processed events: 400 (read)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,535 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036646958/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,536 | INFO     | extracted standard info from prmon json
[2026-03-03 21:26:57] 2026-03-04 02:26:02,536 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 21:26:57] 2026-03-04 02:26:02,536 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 21:26:57] 2026-03-04 02:26:02,536 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 21:26:57] 2026-03-04 02:26:02,536 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 21:26:57] 2026-03-04 02:26:02,539 | INFO     | fitting pss+swap vs Time
[2026-03-03 21:26:57] 2026-03-04 02:26:02,540 | INFO     | sum of square deviations: 483971865.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,540 | INFO     | sum of deviations: -9862578942.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,540 | INFO     | mean x: 1772587588.5
[2026-03-03 21:26:57] 2026-03-04 02:26:02,540 | INFO     | mean y: 2786312.5344827585
[2026-03-03 21:26:57] 2026-03-04 02:26:02,541 | INFO     | intersect: 36125309722.42456
[2026-03-03 21:26:57] 2026-03-04 02:26:02,541 | INFO     | chi2: 1.7546345296566541
[2026-03-03 21:26:57] 2026-03-04 02:26:02,541 | INFO     | sum of square deviations: 424045160.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,542 | INFO     | sum of deviations: -8338994569.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,542 | INFO     | mean x: 1772587436.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,542 | INFO     | mean y: 2790190.6666666665
[2026-03-03 21:26:57] 2026-03-04 02:26:02,542 | INFO     | intersect: 34861334506.75233
[2026-03-03 21:26:57] 2026-03-04 02:26:02,543 | INFO     | chi2: 1.7560973851903023
[2026-03-03 21:26:57] 2026-03-04 02:26:02,543 | INFO     | current chi2=1.7560973851903023 (change=-0.08337095326252769 %)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,543 | INFO     | right removable region: 110
[2026-03-03 21:26:57] 2026-03-04 02:26:02,543 | INFO     | sum of square deviations: 424045160.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,544 | INFO     | sum of deviations: -29567188366.00001
[2026-03-03 21:26:57] 2026-03-04 02:26:02,544 | INFO     | mean x: 1772587741.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,544 | INFO     | mean y: 2835551.7837837837
[2026-03-03 21:26:57] 2026-03-04 02:26:02,544 | INFO     | intersect: 123599189377.42216
[2026-03-03 21:26:57] 2026-03-04 02:26:02,545 | INFO     | chi2: 0.21671338041686708
[2026-03-03 21:26:57] 2026-03-04 02:26:02,545 | INFO     | current chi2=0.21671338041686708 (change=87.64908721708142 %)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,545 | INFO     | sum of square deviations: 369281342.5
[2026-03-03 21:26:57] 2026-03-04 02:26:02,546 | INFO     | sum of deviations: -29605429693.000004
[2026-03-03 21:26:57] 2026-03-04 02:26:02,546 | INFO     | mean x: 1772587893.5
[2026-03-03 21:26:57] 2026-03-04 02:26:02,546 | INFO     | mean y: 2835427.566037736
[2026-03-03 21:26:57] 2026-03-04 02:26:02,546 | INFO     | intersect: 142111900295.0315
[2026-03-03 21:26:57] 2026-03-04 02:26:02,546 | INFO     | chi2: 0.15922936682130157
[2026-03-03 21:26:57] 2026-03-04 02:26:02,546 | INFO     | current chi2=0.15922936682130157 (change=26.525364278380042 %)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,547 | INFO     | sum of square deviations: 319447850.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,547 | INFO     | sum of deviations: -25939772614.000004
[2026-03-03 21:26:57] 2026-03-04 02:26:02,547 | INFO     | mean x: 1772588046.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,548 | INFO     | mean y: 2824184.405940594
[2026-03-03 21:26:57] 2026-03-04 02:26:02,548 | INFO     | intersect: 143940342785.75067
[2026-03-03 21:26:57] 2026-03-04 02:26:02,548 | INFO     | chi2: 0.15888957547770935
[2026-03-03 21:26:57] 2026-03-04 02:26:02,548 | INFO     | current chi2=0.15888957547770935 (change=0.2133974092690791 %)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,548 | INFO     | left removable region: 30
[2026-03-03 21:26:57] 2026-03-04 02:26:02,548 | INFO     | sum of square deviations: 158737860.0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,549 | INFO     | sum of deviations: -12863912989.500002
[2026-03-03 21:26:57] 2026-03-04 02:26:02,549 | INFO     | mean x: 1772588320.5
[2026-03-03 21:26:57] 2026-03-04 02:26:02,549 | INFO     | mean y: 2785335.2375
[2026-03-03 21:26:57] 2026-03-04 02:26:02,549 | INFO     | intersect: 143651073910.6028
[2026-03-03 21:26:57] 2026-03-04 02:26:02,550 | INFO     | chi2: 0.14230283988829595
[2026-03-03 21:26:57] 2026-03-04 02:26:02,550 | INFO     | current memory leak: -81.04 B/s (using 80 data points, chi2=0.14)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,550 | INFO     | could have reported an average CPU frequency of 2686 MHz (7 samples)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,550 | INFO     | ..............................
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . Timing measurements:
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . get job = 0 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . initial setup = 6 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . payload setup = 6 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . stage-in = 0 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . payload execution = 7078 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . stage-out = 0 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,551 | INFO     | . log creation = 0 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,552 | INFO     | ..............................
[2026-03-03 21:26:57] 2026-03-04 02:26:02,655 | INFO     | 
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | job summary report
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | --------------------------------------------------
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | PanDA job id: 7036646958
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | task id: 48838605
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | errors: (none)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | pilot state: finished 
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | transexitcode: 0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,656 | INFO     | exeerrorcode: 0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | exeerrordiag: 
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | exitcode: 0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | exitmsg: OK
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | cpuconsumptiontime: 60946 s
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | nevents: 400
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | neventsw: 0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | pid: 2992284
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | pgrp: 2992284
[2026-03-03 21:26:57] 2026-03-04 02:26:02,657 | INFO     | corecount: 11
[2026-03-03 21:26:57] 2026-03-04 02:26:02,658 | INFO     | event service: False
[2026-03-03 21:26:57] 2026-03-04 02:26:02,658 | INFO     | sizes: {0: 2286819, 1: 2287025, 11: 2287053, 7088: 2314472, 7090: 2323470, 7091: 2323526, 7092: 2323848}
[2026-03-03 21:26:57] 2026-03-04 02:26:02,658 | INFO     | --------------------------------------------------
[2026-03-03 21:26:57] 2026-03-04 02:26:02,658 | INFO     | 
[2026-03-03 21:26:57] 2026-03-04 02:26:02,658 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 21:26:57] 2026-03-04 02:26:02,675 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,675 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,675 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,675 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,675 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,675 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,676 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,677 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,677 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 21:26:57] 2026-03-04 02:26:02,677 | INFO     | job 7036646958 has completed (purged errors)
[2026-03-03 21:26:57] 2026-03-04 02:26:02,678 | INFO     | overall cleanup function is called
[2026-03-03 21:26:57] 2026-03-04 02:26:03,686 | INFO     | --- collectZombieJob: --- 10, [2992284]
[2026-03-03 21:26:57] 2026-03-04 02:26:03,687 | INFO     | zombie collector waiting for pid 2992284
[2026-03-03 21:26:57] 2026-03-04 02:26:03,687 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 21:26:57] 2026-03-04 02:26:03,687 | INFO     | collected zombie processes
[2026-03-03 21:26:57] 2026-03-04 02:26:03,687 | INFO     | will attempt to kill all subprocesses of pid=2992284
[2026-03-03 21:26:57] 2026-03-04 02:26:04,013 | INFO     | process IDs to be killed: [2992284] (in reverse order)
[2026-03-03 21:26:57] 2026-03-04 02:26:04,095 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 21:26:57] 2026-03-04 02:26:04,095 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 21:26:57] 2026-03-04 02:26:04,105 | INFO     | did not find any defunct processes belonging to 2992284
[2026-03-03 21:26:57] 2026-03-04 02:26:04,114 | INFO     | did not find any defunct processes belonging to 2992284
[2026-03-03 21:26:57] 2026-03-04 02:26:04,114 | INFO     | ready for new job
[2026-03-03 21:26:57] 2026-03-04 02:26:04,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 21:26:57] 2026-03-04 02:26:04,116 | INFO     | **************************************
[2026-03-03 21:26:57] 2026-03-04 02:26:04,116 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 21:26:57] 2026-03-04 02:26:04,116 | INFO     | **************************************
[2026-03-03 21:26:57] 2026-03-04 02:26:04,116 | INFO     | 
[2026-03-03 21:26:57] 2026-03-04 02:26:04,119 | INFO     | architecture information:
[2026-03-03 21:26:57] 2026-03-04 02:26:04,119 | INFO     | executing command: cat /etc/os-release
[2026-03-03 21:26:57] 2026-03-04 02:26:04,130 | INFO     | cat /etc/os-release:
[2026-03-03 21:26:57] NAME="CentOS Linux"
[2026-03-03 21:26:57] VERSION="7 (Core)"
[2026-03-03 21:26:57] ID="centos"
[2026-03-03 21:26:57] ID_LIKE="rhel fedora"
[2026-03-03 21:26:57] VERSION_ID="7"
[2026-03-03 21:26:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 21:26:57] ANSI_COLOR="0;31"
[2026-03-03 21:26:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 21:26:57] HOME_URL="https://www.centos.org/"
[2026-03-03 21:26:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 21:26:57] 
[2026-03-03 21:26:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 21:26:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 21:26:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 21:26:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 21:26:57] 
[2026-03-03 21:26:57] 2026-03-04 02:26:04,131 | INFO     | **************************************
[2026-03-03 21:26:57] 2026-03-04 02:26:04,634 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 21:26:57] 2026-03-04 02:26:04,647 | INFO     | sufficient remaining disk space (61787340800 B)
[2026-03-03 21:26:57] 2026-03-04 02:26:04,647 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 21:26:57] 2026-03-04 02:26:04,647 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 21:26:57] 2026-03-04 02:26:04,647 | INFO     | update_server=False
[2026-03-03 21:26:57] 2026-03-04 02:26:04,648 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 21:26:57] 2026-03-04 02:26:04,648 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:26:57] 2026-03-04 02:26:04,648 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 21:26:57] 2026-03-04 02:26:04,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:26:57] 2026-03-04 02:26:04,649 | INFO     | aborting loop
[2026-03-03 21:26:57] 2026-03-04 02:26:05,524 | INFO     | all payload control threads have been joined
[2026-03-03 21:26:57] 2026-03-04 02:26:05,552 | INFO     | all job control threads have been joined
[2026-03-03 21:26:57] 2026-03-04 02:26:05,652 | INFO     | [job] retrieve thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:05,653 | INFO     | [job] job monitor thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:05,654 | INFO     | [job] queue monitor thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:05,748 | INFO     | all data control threads have been joined
[2026-03-03 21:26:57] 2026-03-04 02:26:05,893 | INFO     | [payload] validate_post thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:05,895 | INFO     | [payload] failed_post thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:05,940 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:05,999 | INFO     | [job] validate thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:06,529 | INFO     | [payload] control thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:06,557 | INFO     | [job] control thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:06,654 | INFO     | [data] copytool_out thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:06,753 | INFO     | [data] control thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:06,877 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:06,889 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:06,916 | INFO     | [data] copytool_in thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:07,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 21:26:57] 2026-03-04 02:26:11,270 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:15,099 | INFO     | job.realtimelogging is not enabled
[2026-03-03 21:26:57] 2026-03-04 02:26:16,104 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 21:26:57] 2026-03-04 02:26:35,070 | INFO     | PID=2987895 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 21:26:57] 2026-03-04 02:26:35,070 | INFO     | .. there are 11 such processes running
[2026-03-03 21:26:57] 2026-03-04 02:26:35,071 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 21:26:57] 2026-03-04 02:26:35,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 21:26:57] 2026-03-04 02:26:35,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 21:26:57] 2026-03-04 02:26:50,541 | INFO     | [monitor] cgroup control has ended
[2026-03-03 21:26:57] 2026-03-04 02:26:52,610 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242423080768)>', '<ExcThread(monitor, started 140242040362752)>']
[2026-03-03 21:26:57] 2026-03-04 02:26:53,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 21:26:57] 2026-03-04 02:26:53,154 | INFO     | [monitor] control thread has ended
[2026-03-03 21:26:57] 2026-03-04 02:26:57,635 | INFO     | all workflow threads have been joined
[2026-03-03 21:26:57] 2026-03-04 02:26:57,635 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 21:26:57] 2026-03-04 02:26:57,636 | INFO     | traces error code: 0
[2026-03-03 21:26:57] 2026-03-04 02:26:57,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 21:26:57] 2026-03-04 02:26:57,739 [wrapper] ==== pilot stdout END ====
[2026-03-03 21:26:57] 2026-03-04 02:26:57,741 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 21:26:57] 2026-03-04 02:26:57,744 [wrapper] pilotpid: 2987895
[2026-03-03 21:26:57] 2026-03-04 02:26:57,746 [wrapper] Pilot exit status: 0
[2026-03-03 21:26:57] 2026-03-04 02:26:57,754 [wrapper] pandaids: 7036646958
[2026-03-03 21:26:57] 2026-03-04 02:26:57,810 [wrapper] cleanup supervisor_pilot 3139231 2987896
[2026-03-03 21:26:57] 2026-03-04 02:26:57,813 [wrapper] Test setup, not cleaning
[2026-03-03 21:26:57] 2026-03-04 02:26:57,815 [wrapper] apfmon messages muted
[2026-03-03 21:26:57] 2026-03-04 02:26:57,818 [wrapper] ==== wrapper stdout END ====
[2026-03-03 21:26:57] 2026-03-04 02:26:57,820 [wrapper] ==== wrapper stderr END ====
[2026-03-03 21:26:57]  *** Error codes and diagnostics ***
[2026-03-03 21:26:57]     "exeErrorCode": 0,
[2026-03-03 21:26:57]     "exeErrorDiag": "",
[2026-03-03 21:26:57]     "pilotErrorCode": 0,
[2026-03-03 21:26:57]     "pilotErrorDiag": "",
[2026-03-03 21:26:57]  *** Listing of results directory ***
[2026-03-03 21:26:57] total 491860
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 15:50 pilot3.tar.gz
[2026-03-03 21:26:57] -rwx------. 1 boincer umatlas     36322 Mar  3 16:17 runpilot2-wrapper.sh
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 16:18 queuedata.json
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas       100 Mar  3 19:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 21:26:57] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 19:27 run_atlas
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas       105 Mar  3 19:27 job.xml
[2026-03-03 21:26:57] -rw-r--r--. 2 boincer umatlas 285071412 Mar  3 19:27 EVNT.48343768._000113.pool.root.1
[2026-03-03 21:26:57] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 19:27 start_atlas.sh
[2026-03-03 21:26:57] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 19:27 shared
[2026-03-03 21:26:57] -rw-r--r--. 2 boincer umatlas    597967 Mar  3 19:27 input.tar.gz
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas         0 Mar  3 19:27 boinc_lockfile
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas      2564 Mar  3 19:27 pandaJob.out
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas        57 Mar  3 19:27 setup.sh.local
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas    998484 Mar  3 19:27 agis_schedconf.cvmfs.json
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas   1516092 Mar  3 19:27 agis_ddmendpoints.agis.ALL.json
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas       441 Mar  3 19:27 workernode_map.json
[2026-03-03 21:26:57] drwx------. 5 boincer umatlas      4096 Mar  3 19:27 pilot3
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas      6615 Mar  3 21:20 init_data.xml
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas       529 Mar  3 21:25 boinc_task_state.xml
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas 211826697 Mar  3 21:25 HITS.48838605._002940.pool.root.1
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas      1036 Mar  3 21:25 memory_monitor_summary.json
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas    411238 Mar  3 21:26 log.48838605._002940.job.log.tgz.1
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas      6387 Mar  3 21:26 heartbeat.json
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas        95 Mar  3 21:26 pilot_heartbeat.json
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 21:26 boinc_mmap_file
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas        27 Mar  3 21:26 wrapper_checkpoint.txt
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas      4892 Mar  3 21:26 pilotlog.txt
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas   1006725 Mar  3 21:26 log.48838605._002940.job.log.1
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas       357 Mar  3 21:26 output.list
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas       620 Mar  3 21:26 runtime_log
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas   1433600 Mar  3 21:26 result.tar.gz
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas      9343 Mar  3 21:26 runtime_log.err
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas       652 Mar  3 21:26 lWqKDmtImH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuhFLDmgooLHo.diag
[2026-03-03 21:26:57] -rw-r--r--. 1 boincer umatlas     21028 Mar  3 21:26 stderr.txt
[2026-03-03 21:26:57] HITS file was successfully produced:
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas 211826697 Mar  3 21:25 shared/HITS.pool.root.1
[2026-03-03 21:26:57]  *** Contents of shared directory: ***
[2026-03-03 21:26:57] total 487260
[2026-03-03 21:26:57] -rw-r--r--. 2 boincer umatlas 285071412 Mar  3 19:27 ATLAS.root_0
[2026-03-03 21:26:57] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 19:27 start_atlas.sh
[2026-03-03 21:26:57] -rw-r--r--. 2 boincer umatlas    597967 Mar  3 19:27 input.tar.gz
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas 211826697 Mar  3 21:25 HITS.pool.root.1
[2026-03-03 21:26:57] -rw-------. 1 boincer umatlas   1433600 Mar  3 21:26 result.tar.gz
21:26:59 (2984232): run_atlas exited; CPU time 61155.605347
21:26:59 (2984232): called boinc_finish(0)

</stderr_txt>
]]>

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