Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:24:41 (8394): wrapper (7.7.26015): starting
20:24:41 (8394): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 20:24:41] Arguments: --nthreads 8
[2026-03-03 20:24:41] Threads: 8
[2026-03-03 20:24:41] Checking for CVMFS
[2026-03-03 20:24:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 20:24:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 20:24:41] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 20:24:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 20:24:41] 2.11.2.0 5882 47598 73608 156864 1 49 11754270 20275201 1 130560 0 12482599 99.929 2901367 31719 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 20:24:41] CVMFS is ok
[2026-03-03 20:24:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 20:24:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 20:24:41] Further information can be found at the LHC@home message board.
[2026-03-03 20:24:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 20:24:41] Checking for apptainer binary...
[2026-03-03 20:24:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 20:24:41] Running /usr/bin/apptainer --version
[2026-03-03 20:24:41] apptainer version 1.3.2-1.el7
[2026-03-03 20:24:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 20:24:43] c-204-12.aglt2.org
[2026-03-03 20:24:43] apptainer works
[2026-03-03 20:24:43] Set ATHENA_PROC_NUMBER=8
[2026-03-03 20:24:43] Set ATHENA_CORE_NUMBER=8
[2026-03-03 20:24:43] Starting ATLAS job with PandaID=7036809217
[2026-03-03 20:24:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 22:45:25]  *** The last 200 lines of the pilot log: ***
[2026-03-03 22:45:25] 2026-03-04 03:44:52,906 | INFO     | extracted standard info from prmon json
[2026-03-03 22:45:25] 2026-03-04 03:44:52,906 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 22:45:25] 2026-03-04 03:44:52,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 22:45:25] 2026-03-04 03:44:52,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 22:45:25] 2026-03-04 03:44:52,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 22:45:25] 2026-03-04 03:44:52,909 | INFO     | fitting pss+swap vs Time
[2026-03-03 22:45:25] 2026-03-04 03:44:52,909 | INFO     | sum of square deviations: 797291228.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,910 | INFO     | sum of deviations: -9562700380.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,910 | INFO     | mean x: 1772591680.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,910 | INFO     | mean y: 2569746.394160584
[2026-03-03 22:45:25] 2026-03-04 03:44:52,910 | INFO     | intersect: 21263010770.487354
[2026-03-03 22:45:25] 2026-03-04 03:44:52,911 | INFO     | chi2: 1.5982712960700916
[2026-03-03 22:45:25] 2026-03-04 03:44:52,911 | INFO     | sum of square deviations: 713140813.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,912 | INFO     | sum of deviations: -8552283753.000004
[2026-03-03 22:45:25] 2026-03-04 03:44:52,912 | INFO     | mean x: 1772591527.5
[2026-03-03 22:45:25] 2026-03-04 03:44:52,912 | INFO     | mean y: 2571578.287878788
[2026-03-03 22:45:25] 2026-03-04 03:44:52,912 | INFO     | intersect: 21260232681.108128
[2026-03-03 22:45:25] 2026-03-04 03:44:52,912 | INFO     | chi2: 1.5982742054513925
[2026-03-03 22:45:25] 2026-03-04 03:44:52,912 | INFO     | current chi2=1.5982742054513925 (change=-0.00018203300704579378 %)
[2026-03-03 22:45:25] 2026-03-04 03:44:52,912 | INFO     | right removable region: 131
[2026-03-03 22:45:25] 2026-03-04 03:44:52,913 | INFO     | sum of square deviations: 713140813.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,913 | INFO     | sum of deviations: -30164872039.000004
[2026-03-03 22:45:25] 2026-03-04 03:44:52,914 | INFO     | mean x: 1772591832.5
[2026-03-03 22:45:25] 2026-03-04 03:44:52,914 | INFO     | mean y: 2606465.015151515
[2026-03-03 22:45:25] 2026-03-04 03:44:52,914 | INFO     | intersect: 74980794264.70714
[2026-03-03 22:45:25] 2026-03-04 03:44:52,914 | INFO     | chi2: 0.14318533141277645
[2026-03-03 22:45:25] 2026-03-04 03:44:52,914 | INFO     | current chi2=0.14318533141277645 (change=91.04123738161051 %)
[2026-03-03 22:45:25] 2026-03-04 03:44:52,914 | INFO     | sum of square deviations: 635130048.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,915 | INFO     | sum of deviations: -29012183770.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,915 | INFO     | mean x: 1772591985.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,915 | INFO     | mean y: 2604125.7007874018
[2026-03-03 22:45:25] 2026-03-04 03:44:52,915 | INFO     | intersect: 80973051957.58968
[2026-03-03 22:45:25] 2026-03-04 03:44:52,916 | INFO     | chi2: 0.1246809703235397
[2026-03-03 22:45:25] 2026-03-04 03:44:52,916 | INFO     | current chi2=0.1246809703235397 (change=12.923363662086413 %)
[2026-03-03 22:45:25] 2026-03-04 03:44:52,916 | INFO     | left removable region: 20
[2026-03-03 22:45:25] 2026-03-04 03:44:52,916 | INFO     | sum of square deviations: 424045160.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,917 | INFO     | sum of deviations: -20556206878.000004
[2026-03-03 22:45:25] 2026-03-04 03:44:52,917 | INFO     | mean x: 1772592107.0
[2026-03-03 22:45:25] 2026-03-04 03:44:52,917 | INFO     | mean y: 2592226.4504504506
[2026-03-03 22:45:25] 2026-03-04 03:44:52,917 | INFO     | intersect: 85931576917.14217
[2026-03-03 22:45:25] 2026-03-04 03:44:52,917 | INFO     | chi2: 0.11602443634761445
[2026-03-03 22:45:25] 2026-03-04 03:44:52,918 | INFO     | current memory leak: -48.48 B/s (using 111 data points, chi2=0.12)
[2026-03-03 22:45:25] 2026-03-04 03:44:52,918 | INFO     | could have reported an average CPU frequency of 1745 MHz (8 samples)
[2026-03-03 22:45:25] 2026-03-04 03:44:52,918 | INFO     | ..............................
[2026-03-03 22:45:25] 2026-03-04 03:44:52,918 | INFO     | . Timing measurements:
[2026-03-03 22:45:25] 2026-03-04 03:44:52,918 | INFO     | . get job = 0 s
[2026-03-03 22:45:25] 2026-03-04 03:44:52,918 | INFO     | . initial setup = 8 s
[2026-03-03 22:45:25] 2026-03-04 03:44:52,918 | INFO     | . payload setup = 8 s
[2026-03-03 22:45:25] 2026-03-04 03:44:52,919 | INFO     | . stage-in = 0 s
[2026-03-03 22:45:25] 2026-03-04 03:44:52,919 | INFO     | . payload execution = 8359 s
[2026-03-03 22:45:25] 2026-03-04 03:44:52,919 | INFO     | . stage-out = 0 s
[2026-03-03 22:45:25] 2026-03-04 03:44:52,919 | INFO     | . log creation = 0 s
[2026-03-03 22:45:25] 2026-03-04 03:44:52,919 | INFO     | ..............................
[2026-03-03 22:45:25] 2026-03-04 03:44:53,255 | INFO     | 
[2026-03-03 22:45:25] 2026-03-04 03:44:53,255 | INFO     | job summary report
[2026-03-03 22:45:25] 2026-03-04 03:44:53,255 | INFO     | --------------------------------------------------
[2026-03-03 22:45:25] 2026-03-04 03:44:53,256 | INFO     | PanDA job id: 7036809217
[2026-03-03 22:45:25] 2026-03-04 03:44:53,256 | INFO     | task id: 48878057
[2026-03-03 22:45:25] 2026-03-04 03:44:53,256 | INFO     | errors: (none)
[2026-03-03 22:45:25] 2026-03-04 03:44:53,256 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 22:45:25] 2026-03-04 03:44:53,256 | INFO     | pilot state: finished 
[2026-03-03 22:45:25] 2026-03-04 03:44:53,256 | INFO     | transexitcode: 0
[2026-03-03 22:45:25] 2026-03-04 03:44:53,256 | INFO     | exeerrorcode: 0
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | exeerrordiag: 
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | exitcode: 0
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | exitmsg: OK
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | cpuconsumptiontime: 62579 s
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | nevents: 400
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | neventsw: 0
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | pid: 16674
[2026-03-03 22:45:25] 2026-03-04 03:44:53,257 | INFO     | pgrp: 16674
[2026-03-03 22:45:25] 2026-03-04 03:44:53,258 | INFO     | corecount: 8
[2026-03-03 22:45:25] 2026-03-04 03:44:53,258 | INFO     | event service: False
[2026-03-03 22:45:25] 2026-03-04 03:44:53,258 | INFO     | sizes: {0: 2286015, 1: 2287133, 12: 2287133, 8371: 2314969, 8372: 2324023, 8375: 2324161}
[2026-03-03 22:45:25] 2026-03-04 03:44:53,258 | INFO     | --------------------------------------------------
[2026-03-03 22:45:25] 2026-03-04 03:44:53,258 | INFO     | 
[2026-03-03 22:45:25] 2026-03-04 03:44:53,258 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 22:45:25] 2026-03-04 03:44:53,285 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,285 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,285 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,286 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,286 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,286 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,286 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,286 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,287 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,287 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,287 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,287 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,287 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,287 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,288 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,288 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,288 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,288 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 22:45:25] 2026-03-04 03:44:53,288 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,288 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 22:45:25] 2026-03-04 03:44:53,289 | INFO     | job 7036809217 has completed (purged errors)
[2026-03-03 22:45:25] 2026-03-04 03:44:53,289 | INFO     | overall cleanup function is called
[2026-03-03 22:45:25] 2026-03-04 03:44:53,784 | WARNING  | process 16674 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 22:45:25] 2026-03-04 03:44:53,852 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 22:45:25] 2026-03-04 03:44:53,853 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 22:45:25] 2026-03-04 03:44:53,854 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 22:45:25] 2026-03-04 03:44:53,855 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 22:45:25] 2026-03-04 03:44:53,855 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7036809217/payload.stdout) since it has not been created yet
[2026-03-03 22:45:25] 2026-03-04 03:44:53,855 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 22:45:25] 2026-03-04 03:44:53,874 | INFO     | sufficient remaining disk space (18382585856 B)
[2026-03-03 22:45:25] 2026-03-04 03:44:53,875 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 22:45:25] 2026-03-04 03:44:53,875 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7036809217/HITS.48878057._000732.pool.root.1 since it does not exist
[2026-03-03 22:45:25] 2026-03-04 03:44:53,964 | INFO     | number of running child processes to parent process 16674: 1
[2026-03-03 22:45:25] 2026-03-04 03:44:53,964 | INFO     | maximum number of monitored processes: 7
[2026-03-03 22:45:25] 2026-03-04 03:44:53,964 | INFO     | aborting job monitoring since job object (job id=7036809217) has expired
[2026-03-03 22:45:25] 2026-03-04 03:44:54,297 | INFO     | --- collectZombieJob: --- 10, [16674]
[2026-03-03 22:45:25] 2026-03-04 03:44:54,298 | INFO     | zombie collector waiting for pid 16674
[2026-03-03 22:45:25] 2026-03-04 03:44:54,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 22:45:25] 2026-03-04 03:44:54,298 | INFO     | collected zombie processes
[2026-03-03 22:45:25] 2026-03-04 03:44:54,298 | INFO     | will attempt to kill all subprocesses of pid=16674
[2026-03-03 22:45:25] 2026-03-04 03:44:54,380 | INFO     | process IDs to be killed: [16674] (in reverse order)
[2026-03-03 22:45:25] 2026-03-04 03:44:54,441 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 22:45:25] 2026-03-04 03:44:54,441 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 22:45:25] 2026-03-04 03:44:54,445 | INFO     | did not find any defunct processes belonging to 16674
[2026-03-03 22:45:25] 2026-03-04 03:44:54,448 | INFO     | did not find any defunct processes belonging to 16674
[2026-03-03 22:45:25] 2026-03-04 03:44:54,448 | INFO     | ready for new job
[2026-03-03 22:45:25] 2026-03-04 03:44:54,448 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 22:45:25] 2026-03-04 03:44:54,450 | INFO     | **************************************
[2026-03-03 22:45:25] 2026-03-04 03:44:54,450 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 22:45:25] 2026-03-04 03:44:54,450 | INFO     | **************************************
[2026-03-03 22:45:25] 2026-03-04 03:44:54,450 | INFO     | 
[2026-03-03 22:45:25] 2026-03-04 03:44:54,451 | INFO     | architecture information:
[2026-03-03 22:45:25] 2026-03-04 03:44:54,451 | INFO     | executing command: cat /etc/os-release
[2026-03-03 22:45:25] 2026-03-04 03:44:54,469 | INFO     | cat /etc/os-release:
[2026-03-03 22:45:25] NAME="CentOS Linux"
[2026-03-03 22:45:25] VERSION="7 (Core)"
[2026-03-03 22:45:25] ID="centos"
[2026-03-03 22:45:25] ID_LIKE="rhel fedora"
[2026-03-03 22:45:25] VERSION_ID="7"
[2026-03-03 22:45:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 22:45:25] ANSI_COLOR="0;31"
[2026-03-03 22:45:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 22:45:25] HOME_URL="https://www.centos.org/"
[2026-03-03 22:45:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 22:45:25] 
[2026-03-03 22:45:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 22:45:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 22:45:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 22:45:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 22:45:25] 
[2026-03-03 22:45:25] 2026-03-04 03:44:54,470 | INFO     | **************************************
[2026-03-03 22:45:25] 2026-03-04 03:44:54,973 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 22:45:25] 2026-03-04 03:44:54,992 | INFO     | sufficient remaining disk space (18383634432 B)
[2026-03-03 22:45:25] 2026-03-04 03:44:54,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 22:45:25] 2026-03-04 03:44:54,993 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 22:45:25] 2026-03-04 03:44:54,993 | INFO     | update_server=False
[2026-03-03 22:45:25] 2026-03-04 03:44:54,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 22:45:25] 2026-03-04 03:44:54,994 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 22:45:25] 2026-03-04 03:44:54,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 22:45:25] 2026-03-04 03:44:54,995 | INFO     | aborting loop
[2026-03-03 22:45:25] 2026-03-04 03:44:55,115 | INFO     | all job control threads have been joined
[2026-03-03 22:45:25] 2026-03-04 03:44:55,116 | INFO     | all payload control threads have been joined
[2026-03-03 22:45:25] 2026-03-04 03:44:55,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 22:45:25] 2026-03-04 03:44:55,999 | INFO     | [job] retrieve thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,000 | INFO     | [job] queue monitor thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,000 | INFO     | [job] job monitor thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,014 | INFO     | all data control threads have been joined
[2026-03-03 22:45:25] 2026-03-04 03:44:56,043 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,098 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 22:45:25] 2026-03-04 03:44:56,121 | INFO     | [job] control thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,121 | INFO     | [payload] control thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,208 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,215 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,278 | INFO     | [payload] validate_post thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,428 | INFO     | [payload] failed_post thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:56,747 | INFO     | [data] copytool_in thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:57,020 | INFO     | [data] control thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:57,239 | INFO     | [job] validate thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:57,297 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:44:57,384 | INFO     | [data] copytool_out thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:45:00,105 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 22:45:25] 2026-03-04 03:45:19,408 | INFO     | [monitor] cgroup control has ended
[2026-03-03 22:45:25] 2026-03-04 03:45:19,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140048303294272)>', '<ExcThread(monitor, started 140047726663424)>']
[2026-03-03 22:45:25] 2026-03-04 03:45:24,849 | INFO     | PID=12073 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 22:45:25] 2026-03-04 03:45:24,851 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 22:45:25] 2026-03-04 03:45:24,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 22:45:25] 2026-03-04 03:45:24,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 22:45:25] 2026-03-04 03:45:24,851 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 22:45:25] 2026-03-04 03:45:24,851 | INFO     | [monitor] control thread has ended
[2026-03-03 22:45:25] 2026-03-04 03:45:24,950 | INFO     | all workflow threads have been joined
[2026-03-03 22:45:25] 2026-03-04 03:45:24,950 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 22:45:25] 2026-03-04 03:45:24,950 | INFO     | traces error code: 0
[2026-03-03 22:45:25] 2026-03-04 03:45:24,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 22:45:25] 2026-03-04 03:45:25,061 [wrapper] ==== pilot stdout END ====
[2026-03-03 22:45:25] 2026-03-04 03:45:25,066 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 22:45:25] 2026-03-04 03:45:25,070 [wrapper] pilotpid: 12073
[2026-03-03 22:45:25] 2026-03-04 03:45:25,075 [wrapper] Pilot exit status: 0
[2026-03-03 22:45:25] 2026-03-04 03:45:25,122 [wrapper] pandaids: 7036809217
[2026-03-03 22:45:25] 2026-03-04 03:45:25,163 [wrapper] cleanup supervisor_pilot 12299 12074
[2026-03-03 22:45:25] 2026-03-04 03:45:25,168 [wrapper] Test setup, not cleaning
[2026-03-03 22:45:25] 2026-03-04 03:45:25,173 [wrapper] apfmon messages muted
[2026-03-03 22:45:25] 2026-03-04 03:45:25,178 [wrapper] ==== wrapper stdout END ====
[2026-03-03 22:45:25] 2026-03-04 03:45:25,182 [wrapper] ==== wrapper stderr END ====
[2026-03-03 22:45:25]  *** Error codes and diagnostics ***
[2026-03-03 22:45:25]     "exeErrorCode": 0,
[2026-03-03 22:45:25]     "exeErrorDiag": "",
[2026-03-03 22:45:25]     "pilotErrorCode": 0,
[2026-03-03 22:45:25]     "pilotErrorDiag": "",
[2026-03-03 22:45:25]  *** Listing of results directory ***
[2026-03-03 22:45:25] total 508172
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 18:05 pilot3.tar.gz
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 18:13 queuedata.json
[2026-03-03 22:45:25] -rwx------ 1 boincer umatlas     36322 Mar  3 18:14 runpilot2-wrapper.sh
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas       100 Mar  3 20:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 22:45:25] -rwxr-xr-x 1 boincer umatlas      7986 Mar  3 20:24 run_atlas
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas       105 Mar  3 20:24 job.xml
[2026-03-03 22:45:25] -rw-r--r-- 2 boincer umatlas 296762871 Mar  3 20:24 EVNT.48717157._000030.pool.root.1
[2026-03-03 22:45:25] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 20:24 start_atlas.sh
[2026-03-03 22:45:25] drwxrwx--x 2 boincer umatlas      4096 Mar  3 20:24 shared
[2026-03-03 22:45:25] -rw-r--r-- 2 boincer umatlas    597962 Mar  3 20:24 input.tar.gz
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas         0 Mar  3 20:24 boinc_lockfile
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas      2593 Mar  3 20:24 pandaJob.out
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas        57 Mar  3 20:24 setup.sh.local
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas    998484 Mar  3 20:24 agis_schedconf.cvmfs.json
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas   1516092 Mar  3 20:24 agis_ddmendpoints.agis.ALL.json
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas       432 Mar  3 20:25 workernode_map.json
[2026-03-03 22:45:25] drwx------ 5 boincer umatlas      4096 Mar  3 20:25 pilot3
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas       529 Mar  3 22:44 boinc_task_state.xml
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas 216574001 Mar  3 22:44 HITS.48878057._000732.pool.root.1
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas      1046 Mar  3 22:44 memory_monitor_summary.json
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas    372438 Mar  3 22:44 log.48878057._000732.job.log.tgz.1
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas      6395 Mar  3 22:44 heartbeat.json
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas      5909 Mar  3 22:45 init_data.xml
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 22:45 boinc_mmap_file
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas        27 Mar  3 22:45 wrapper_checkpoint.txt
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas        95 Mar  3 22:45 pilot_heartbeat.json
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas      4742 Mar  3 22:45 pilotlog.txt
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas   1178998 Mar  3 22:45 log.48878057._000732.job.log.1
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas       357 Mar  3 22:45 output.list
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas       620 Mar  3 22:45 runtime_log
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas   1566720 Mar  3 22:45 result.tar.gz
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas      9341 Mar  3 22:45 runtime_log.err
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas       659 Mar  3 22:45 oHjKDmQ7nH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAOILDmsVh30m.diag
[2026-03-03 22:45:25] -rw-r--r-- 1 boincer umatlas     21415 Mar  3 22:45 stderr.txt
[2026-03-03 22:45:25] HITS file was successfully produced:
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas 216574001 Mar  3 22:44 shared/HITS.pool.root.1
[2026-03-03 22:45:25]  *** Contents of shared directory: ***
[2026-03-03 22:45:25] total 503444
[2026-03-03 22:45:25] -rw-r--r-- 2 boincer umatlas 296762871 Mar  3 20:24 ATLAS.root_0
[2026-03-03 22:45:25] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 20:24 start_atlas.sh
[2026-03-03 22:45:25] -rw-r--r-- 2 boincer umatlas    597962 Mar  3 20:24 input.tar.gz
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas 216574001 Mar  3 22:44 HITS.pool.root.1
[2026-03-03 22:45:25] -rw------- 1 boincer umatlas   1566720 Mar  3 22:45 result.tar.gz
22:45:26 (8394): run_atlas exited; CPU time 62534.021899
22:45:26 (8394): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN