Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:49:41 (4190984): wrapper (7.7.26015): starting
09:49:41 (4190984): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 09:49:41] Arguments: --nthreads 4
[2026-03-04 09:49:41] Threads: 4
[2026-03-04 09:49:41] Checking for CVMFS
[2026-03-04 09:49:41] No cvmfs_config command found, will try listing directly
[2026-03-04 09:49:41] CVMFS is ok
[2026-03-04 09:49:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 09:49:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 09:49:41] Further information can be found at the LHC@home message board.
[2026-03-04 09:49:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 09:49:41] Checking for apptainer binary...
[2026-03-04 09:49:41] which: no apptainer in ((null))
[2026-03-04 09:49:41] apptainer is not installed, using version from CVMFS
[2026-03-04 09:49:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 09:49:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-04 09:49:42] apptainer works
[2026-03-04 09:49:42] Set ATHENA_PROC_NUMBER=4
[2026-03-04 09:49:42] Set ATHENA_CORE_NUMBER=4
[2026-03-04 09:49:42] Starting ATLAS job with PandaID=7036809173
[2026-03-04 09:49:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 11:56:21]  *** The last 200 lines of the pilot log: ***
[2026-03-04 11:56:21] 2026-03-04 10:55:27,536 | INFO     | time since job start (7524s) is within the limit (349056.0s)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,430 | INFO     | job 7036809173 has state=finished
[2026-03-04 11:56:21] 2026-03-04 10:55:28,430 | INFO     | preparing for final server update for job 7036809173 in state='finished'
[2026-03-04 11:56:21] 2026-03-04 10:55:28,430 | INFO     | reading metadata from: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7036809173/jobReport.json
[2026-03-04 11:56:21] 2026-03-04 10:55:28,432 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot60/slots/0/workernode_map.json
[2026-03-04 11:56:21] 2026-03-04 10:55:28,433 | INFO     | this job has now completed (state=finished)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,433 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,433 | INFO     | log transfer has been attempted: DONE
[2026-03-04 11:56:21] 2026-03-04 10:55:28,433 | INFO     | job 7036809173 has finished - writing final server update
[2026-03-04 11:56:21] 2026-03-04 10:55:28,433 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_609392/.job.ad'
[2026-03-04 11:56:21] 2026-03-04 10:55:28,433 | INFO     | total number of processed events: 400 (read)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,455 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-7036809173/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,456 | INFO     | extracted standard info from prmon json
[2026-03-04 11:56:21] 2026-03-04 10:55:28,456 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 11:56:21] 2026-03-04 10:55:28,456 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 11:56:21] 2026-03-04 10:55:28,456 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 11:56:21] 2026-03-04 10:55:28,456 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 11:56:21] 2026-03-04 10:55:28,458 | INFO     | fitting pss+swap vs Time
[2026-03-04 11:56:21] 2026-03-04 10:55:28,459 | INFO     | sum of square deviations: 576985702.0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,459 | INFO     | sum of deviations: 14104620445.999998
[2026-03-04 11:56:21] 2026-03-04 10:55:28,459 | INFO     | mean x: 1772617951.0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,459 | INFO     | mean y: 2308503.62601626
[2026-03-04 11:56:21] 2026-03-04 10:55:28,460 | INFO     | intersect: -43329966989.43503
[2026-03-04 11:56:21] 2026-03-04 10:55:28,460 | INFO     | chi2: 1.238469834795155
[2026-03-04 11:56:21] 2026-03-04 10:55:28,460 | INFO     | sum of square deviations: 509440249.5
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | sum of deviations: 13457851994.5
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | mean x: 1772617798.5
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | mean y: 2307042.5
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | intersect: -46824829208.400856
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | chi2: 1.2400729209096406
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | current chi2=1.2400729209096406 (change=-0.12944086884043618 %)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | right removable region: 117
[2026-03-04 11:56:21] 2026-03-04 10:55:28,461 | INFO     | sum of square deviations: 509440249.5
[2026-03-04 11:56:21] 2026-03-04 10:55:28,462 | INFO     | sum of deviations: -188361564.5000002
[2026-03-04 11:56:21] 2026-03-04 10:55:28,462 | INFO     | mean x: 1772618103.5
[2026-03-04 11:56:21] 2026-03-04 10:55:28,462 | INFO     | mean y: 2340044.415254237
[2026-03-04 11:56:21] 2026-03-04 10:55:28,462 | INFO     | intersect: 657751782.227469
[2026-03-04 11:56:21] 2026-03-04 10:55:28,462 | INFO     | chi2: 0.0017191018746047153
[2026-03-04 11:56:21] 2026-03-04 10:55:28,463 | INFO     | current chi2=0.0017191018746047153 (change=99.86119146172913 %)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,463 | INFO     | sum of square deviations: 447383272.0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,463 | INFO     | sum of deviations: -152942921.00000006
[2026-03-04 11:56:21] 2026-03-04 10:55:28,463 | INFO     | mean x: 1772618256.0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,463 | INFO     | mean y: 2339952.920353982
[2026-03-04 11:56:21] 2026-03-04 10:55:28,464 | INFO     | intersect: 608329114.4698852
[2026-03-04 11:56:21] 2026-03-04 10:55:28,464 | INFO     | chi2: 0.0017012069379957785
[2026-03-04 11:56:21] 2026-03-04 10:55:28,464 | INFO     | current chi2=0.0017012069379957785 (change=1.0409468381884843 %)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,464 | INFO     | left removable region: 20
[2026-03-04 11:56:21] 2026-03-04 10:55:28,464 | INFO     | sum of square deviations: 282974608.0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,464 | INFO     | sum of deviations: 344329078.9999998
[2026-03-04 11:56:21] 2026-03-04 10:55:28,465 | INFO     | mean x: 1772618378.0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,465 | INFO     | mean y: 2338004.2474226803
[2026-03-04 11:56:21] 2026-03-04 10:55:28,465 | INFO     | intersect: -2154618967.3661346
[2026-03-04 11:56:21] 2026-03-04 10:55:28,465 | INFO     | chi2: 0.0010236532673953526
[2026-03-04 11:56:21] 2026-03-04 10:55:28,465 | INFO     | current memory leak: 1.22 B/s (using 97 data points, chi2=0.00)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,465 | INFO     | could have reported an average CPU frequency of 2816 MHz (8 samples)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,465 | INFO     | ..............................
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . Timing measurements:
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . get job = 0 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . initial setup = 7 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . payload setup = 8 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . stage-in = 0 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . payload execution = 7495 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . stage-out = 0 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | . log creation = 0 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,466 | INFO     | ..............................
[2026-03-04 11:56:21] 2026-03-04 10:55:28,552 | INFO     | 
[2026-03-04 11:56:21] 2026-03-04 10:55:28,552 | INFO     | job summary report
[2026-03-04 11:56:21] 2026-03-04 10:55:28,552 | INFO     | --------------------------------------------------
[2026-03-04 11:56:21] 2026-03-04 10:55:28,552 | INFO     | PanDA job id: 7036809173
[2026-03-04 11:56:21] 2026-03-04 10:55:28,552 | INFO     | task id: 48868979
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | errors: (none)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | pilot state: finished 
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | transexitcode: 0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | exeerrorcode: 0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | exeerrordiag: 
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | exitcode: 0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | exitmsg: OK
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | cpuconsumptiontime: 29214 s
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | nevents: 400
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | neventsw: 0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,553 | INFO     | pid: 8744
[2026-03-04 11:56:21] 2026-03-04 10:55:28,554 | INFO     | pgrp: 8744
[2026-03-04 11:56:21] 2026-03-04 10:55:28,554 | INFO     | corecount: 4
[2026-03-04 11:56:21] 2026-03-04 10:55:28,554 | INFO     | event service: False
[2026-03-04 11:56:21] 2026-03-04 10:55:28,554 | INFO     | sizes: {0: 2287071, 11: 2287071, 7507: 2314456, 7508: 2314455, 7509: 2323531, 7511: 2323587, 7513: 2323909}
[2026-03-04 11:56:21] 2026-03-04 10:55:28,554 | INFO     | --------------------------------------------------
[2026-03-04 11:56:21] 2026-03-04 10:55:28,554 | INFO     | 
[2026-03-04 11:56:21] 2026-03-04 10:55:28,554 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-03-04 11:56:21] 2026-03-04 10:55:28,584 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,584 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,584 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,584 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,586 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 11:56:21] 2026-03-04 10:55:28,586 | INFO     | job 7036809173 has completed (purged errors)
[2026-03-04 11:56:21] 2026-03-04 10:55:28,586 | INFO     | overall cleanup function is called
[2026-03-04 11:56:21] 2026-03-04 10:55:29,595 | INFO     | --- collectZombieJob: --- 10, [8744]
[2026-03-04 11:56:21] 2026-03-04 10:55:29,596 | INFO     | zombie collector waiting for pid 8744
[2026-03-04 11:56:21] 2026-03-04 10:55:29,596 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 11:56:21] 2026-03-04 10:55:29,596 | INFO     | collected zombie processes
[2026-03-04 11:56:21] 2026-03-04 10:55:29,596 | INFO     | will attempt to kill all subprocesses of pid=8744
[2026-03-04 11:56:21] 2026-03-04 10:55:30,131 | INFO     | process IDs to be killed: [8744] (in reverse order)
[2026-03-04 11:56:21] 2026-03-04 10:55:30,350 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 11:56:21] 2026-03-04 10:55:30,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 11:56:21] 2026-03-04 10:55:30,370 | INFO     | did not find any defunct processes belonging to 8744
[2026-03-04 11:56:21] 2026-03-04 10:55:30,386 | INFO     | did not find any defunct processes belonging to 8744
[2026-03-04 11:56:21] 2026-03-04 10:55:30,386 | INFO     | ready for new job
[2026-03-04 11:56:21] 2026-03-04 10:55:30,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 11:56:21] 2026-03-04 10:55:30,388 | INFO     | **************************************
[2026-03-04 11:56:21] 2026-03-04 10:55:30,388 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 11:56:21] 2026-03-04 10:55:30,388 | INFO     | **************************************
[2026-03-04 11:56:21] 2026-03-04 10:55:30,389 | INFO     | 
[2026-03-04 11:56:21] 2026-03-04 10:55:30,396 | INFO     | architecture information:
[2026-03-04 11:56:21] 2026-03-04 10:55:30,397 | INFO     | executing command: cat /etc/os-release
[2026-03-04 11:56:21] 2026-03-04 10:55:30,418 | INFO     | cat /etc/os-release:
[2026-03-04 11:56:21] NAME="CentOS Linux"
[2026-03-04 11:56:21] VERSION="7 (Core)"
[2026-03-04 11:56:21] ID="centos"
[2026-03-04 11:56:21] ID_LIKE="rhel fedora"
[2026-03-04 11:56:21] VERSION_ID="7"
[2026-03-04 11:56:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 11:56:21] ANSI_COLOR="0;31"
[2026-03-04 11:56:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 11:56:21] HOME_URL="https://www.centos.org/"
[2026-03-04 11:56:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 11:56:21] 
[2026-03-04 11:56:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 11:56:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 11:56:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 11:56:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 11:56:21] 
[2026-03-04 11:56:21] 2026-03-04 10:55:30,418 | INFO     | **************************************
[2026-03-04 11:56:21] 2026-03-04 10:55:30,921 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-04 11:56:21] 2026-03-04 10:55:30,950 | INFO     | sufficient remaining disk space (3312688562176 B)
[2026-03-04 11:56:21] 2026-03-04 10:55:30,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 11:56:21] 2026-03-04 10:55:30,951 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 11:56:21] 2026-03-04 10:55:30,951 | INFO     | update_server=False
[2026-03-04 11:56:21] 2026-03-04 10:55:30,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 11:56:21] 2026-03-04 10:55:30,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:56:21] 2026-03-04 10:55:30,951 | INFO     | aborting loop
[2026-03-04 11:56:21] 2026-03-04 10:55:31,373 | INFO     | all data control threads have been joined
[2026-03-04 11:56:21] 2026-03-04 10:55:31,783 | INFO     | all job control threads have been joined
[2026-03-04 11:56:21] 2026-03-04 10:55:31,933 | INFO     | all payload control threads have been joined
[2026-03-04 11:56:21] 2026-03-04 10:55:31,956 | INFO     | [job] retrieve thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:31,957 | INFO     | [job] job monitor thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,137 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,161 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,212 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 11:56:21] 2026-03-04 10:55:32,379 | INFO     | [data] control thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 11:56:21] 2026-03-04 10:55:32,541 | INFO     | [data] copytool_in thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,788 | INFO     | [job] control thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,939 | INFO     | [payload] control thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:32,950 | INFO     | [payload] failed_post thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:33,113 | INFO     | [job] validate thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:33,406 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:33,486 | INFO     | [payload] validate_post thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:33,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:56:21] 2026-03-04 10:55:34,332 | INFO     | [data] copytool_out thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:34,568 | INFO     | [job] queue monitor thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:55:36,387 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 11:56:21] 2026-03-04 10:56:01,290 | INFO     | PID=2318 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-04 11:56:21] 2026-03-04 10:56:01,290 | INFO     | .. there are 18 such processes running
[2026-03-04 11:56:21] 2026-03-04 10:56:01,291 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 11:56:21] 2026-03-04 10:56:01,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 11:56:21] 2026-03-04 10:56:01,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 11:56:21] 2026-03-04 10:56:13,803 | INFO     | [monitor] cgroup control has ended
[2026-03-04 11:56:21] 2026-03-04 10:56:15,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22852785637184)>', '<ExcThread(monitor, started 22852540827392)>']
[2026-03-04 11:56:21] 2026-03-04 10:56:16,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 11:56:21] 2026-03-04 10:56:16,361 | INFO     | [monitor] control thread has ended
[2026-03-04 11:56:21] 2026-03-04 10:56:20,783 | INFO     | all workflow threads have been joined
[2026-03-04 11:56:21] 2026-03-04 10:56:20,783 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 11:56:21] 2026-03-04 10:56:20,783 | INFO     | traces error code: 0
[2026-03-04 11:56:21] 2026-03-04 10:56:20,783 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 11:56:21] 2026-03-04 10:56:20,914 [wrapper] ==== pilot stdout END ====
[2026-03-04 11:56:21] 2026-03-04 10:56:20,919 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 11:56:21] 2026-03-04 10:56:20,923 [wrapper] pilotpid: 2318
[2026-03-04 11:56:21] 2026-03-04 10:56:20,927 [wrapper] Pilot exit status: 0
[2026-03-04 11:56:21] 2026-03-04 10:56:20,940 [wrapper] pandaids: 7036809173
[2026-03-04 11:56:21] 2026-03-04 10:56:21,062 [wrapper] cleanup supervisor_pilot  281737 2319
[2026-03-04 11:56:21] 2026-03-04 10:56:21,067 [wrapper] Test setup, not cleaning
[2026-03-04 11:56:21] 2026-03-04 10:56:21,073 [wrapper] apfmon messages muted
[2026-03-04 11:56:21] 2026-03-04 10:56:21,076 [wrapper] ==== wrapper stdout END ====
[2026-03-04 11:56:21] 2026-03-04 10:56:21,080 [wrapper] ==== wrapper stderr END ====
[2026-03-04 11:56:21]  *** Error codes and diagnostics ***
[2026-03-04 11:56:21]     "exeErrorCode": 0,
[2026-03-04 11:56:21]     "exeErrorDiag": "",
[2026-03-04 11:56:21]     "pilotErrorCode": 0,
[2026-03-04 11:56:21]     "pilotErrorDiag": "",
[2026-03-04 11:56:21]  *** Listing of results directory ***
[2026-03-04 11:56:21] total 504244
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc    584627 Mar  4 00:05 pilot3.tar.gz
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc      5111 Mar  4 00:13 queuedata.json
[2026-03-04 11:56:21] -rwx------ 1 boinc boinc     36322 Mar  4 00:14 runpilot2-wrapper.sh
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc       100 Mar  4 09:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 11:56:21] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 09:49 run_atlas
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc       105 Mar  4 09:49 job.xml
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc      6696 Mar  4 09:49 init_data.xml
[2026-03-04 11:56:21] -rw-r--r-- 2 boinc boinc 296226408 Mar  4 09:49 EVNT.48717036._000053.pool.root.1
[2026-03-04 11:56:21] -rw-r--r-- 2 boinc boinc     15845 Mar  4 09:49 start_atlas.sh
[2026-03-04 11:56:21] drwxrwx--x 2 boinc boinc      4096 Mar  4 09:49 shared
[2026-03-04 11:56:21] -rw-r--r-- 2 boinc boinc    597957 Mar  4 09:49 input.tar.gz
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc         0 Mar  4 09:49 boinc_lockfile
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc      2596 Mar  4 09:49 pandaJob.out
[2026-03-04 11:56:21] -rw------- 1 boinc boinc    997384 Mar  4 09:49 agis_schedconf.cvmfs.json
[2026-03-04 11:56:21] -rw------- 1 boinc boinc   1516092 Mar  4 09:49 agis_ddmendpoints.agis.ALL.json
[2026-03-04 11:56:21] -rw------- 1 boinc boinc       440 Mar  4 09:50 workernode_map.json
[2026-03-04 11:56:21] drwx------ 5 boinc boinc      4096 Mar  4 09:50 pilot3
[2026-03-04 11:56:21] -rw------- 1 boinc boinc 213434311 Mar  4 11:54 HITS.48868979._001320.pool.root.1
[2026-03-04 11:56:21] -rw------- 1 boinc boinc      1025 Mar  4 11:55 memory_monitor_summary.json
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc       529 Mar  4 11:55 boinc_task_state.xml
[2026-03-04 11:56:21] -rw------- 1 boinc boinc    315734 Mar  4 11:55 log.48868979._001320.job.log.tgz.1
[2026-03-04 11:56:21] -rw------- 1 boinc boinc      6338 Mar  4 11:55 heartbeat.json
[2026-03-04 11:56:21] -rw------- 1 boinc boinc        95 Mar  4 11:56 pilot_heartbeat.json
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc        27 Mar  4 11:56 wrapper_checkpoint.txt
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc      8192 Mar  4 11:56 boinc_mmap_file
[2026-03-04 11:56:21] -rw------- 1 boinc boinc      4828 Mar  4 11:56 pilotlog.txt
[2026-03-04 11:56:21] -rw------- 1 boinc boinc   1061585 Mar  4 11:56 log.48868979._001320.job.log.1
[2026-03-04 11:56:21] -rw------- 1 boinc boinc       357 Mar  4 11:56 output.list
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc       620 Mar  4 11:56 runtime_log
[2026-03-04 11:56:21] -rw------- 1 boinc boinc   1392640 Mar  4 11:56 result.tar.gz
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc      9204 Mar  4 11:56 runtime_log.err
[2026-03-04 11:56:21] -rw------- 1 boinc boinc       662 Mar  4 11:56 cOjLDmO7nH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmDLGLDmBTxVxn.diag
[2026-03-04 11:56:21] -rw-r--r-- 1 boinc boinc     21101 Mar  4 11:56 stderr.txt
[2026-03-04 11:56:21] HITS file was successfully produced:
[2026-03-04 11:56:21] -rw------- 1 boinc boinc 213434311 Mar  4 11:54 shared/HITS.pool.root.1
[2026-03-04 11:56:21]  *** Contents of shared directory: ***
[2026-03-04 11:56:21] total 499684
[2026-03-04 11:56:21] -rw-r--r-- 2 boinc boinc 296226408 Mar  4 09:49 ATLAS.root_0
[2026-03-04 11:56:21] -rw-r--r-- 2 boinc boinc     15845 Mar  4 09:49 start_atlas.sh
[2026-03-04 11:56:21] -rw-r--r-- 2 boinc boinc    597957 Mar  4 09:49 input.tar.gz
[2026-03-04 11:56:21] -rw------- 1 boinc boinc 213434311 Mar  4 11:54 HITS.pool.root.1
[2026-03-04 11:56:21] -rw------- 1 boinc boinc   1392640 Mar  4 11:56 result.tar.gz
11:56:23 (4190984): run_atlas exited; CPU time 29540.358893
11:56:23 (4190984): called boinc_finish(0)

</stderr_txt>
]]>

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