Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:34:57 (1812196): wrapper (7.7.26015): starting
11:34:57 (1812196): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 11:34:57] Arguments: --nthreads 4
[2026-03-04 11:34:57] Threads: 4
[2026-03-04 11:34:57] Checking for CVMFS
[2026-03-04 11:34:57] No cvmfs_config command found, will try listing directly
[2026-03-04 11:34:57] CVMFS is ok
[2026-03-04 11:34:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 11:34:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 11:34:57] Further information can be found at the LHC@home message board.
[2026-03-04 11:34:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 11:34:57] Checking for apptainer binary...
[2026-03-04 11:34:57] which: no apptainer in ((null))
[2026-03-04 11:34:57] apptainer is not installed, using version from CVMFS
[2026-03-04 11:34:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 11:34:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-04 11:34:57] apptainer works
[2026-03-04 11:34:57] Set ATHENA_PROC_NUMBER=4
[2026-03-04 11:34:57] Set ATHENA_CORE_NUMBER=4
[2026-03-04 11:34:57] Starting ATLAS job with PandaID=7036701036
[2026-03-04 11:34:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 13:54:37]  *** The last 200 lines of the pilot log: ***
[2026-03-04 13:54:37] 2026-03-04 12:53:32,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,147 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,147 | INFO     | reading metadata from: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7036701036/jobReport.json
[2026-03-04 13:54:37] 2026-03-04 12:53:33,149 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot76/slots/0/workernode_map.json
[2026-03-04 13:54:37] 2026-03-04 12:53:33,149 | INFO     | this job has now completed (state=finished)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,150 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,150 | INFO     | log transfer has been attempted: DONE
[2026-03-04 13:54:37] 2026-03-04 12:53:33,150 | INFO     | job 7036701036 has finished - writing final server update
[2026-03-04 13:54:37] 2026-03-04 12:53:33,150 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2926062/.job.ad'
[2026-03-04 13:54:37] 2026-03-04 12:53:33,150 | INFO     | total number of processed events: 400 (read)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,173 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7036701036/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,174 | INFO     | extracted standard info from prmon json
[2026-03-04 13:54:37] 2026-03-04 12:53:33,174 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 13:54:37] 2026-03-04 12:53:33,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 13:54:37] 2026-03-04 12:53:33,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 13:54:37] 2026-03-04 12:53:33,174 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 13:54:37] 2026-03-04 12:53:33,177 | INFO     | fitting pss+swap vs Time
[2026-03-04 13:54:37] 2026-03-04 12:53:33,177 | INFO     | sum of square deviations: 779958810.0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,178 | INFO     | sum of deviations: -17198298489.5
[2026-03-04 13:54:37] 2026-03-04 12:53:33,178 | INFO     | mean x: 1772624661.5
[2026-03-04 13:54:37] 2026-03-04 12:53:33,178 | INFO     | mean y: 2406969.757352941
[2026-03-04 13:54:37] 2026-03-04 12:53:33,178 | INFO     | intersect: 39089250592.0839
[2026-03-04 13:54:37] 2026-03-04 12:53:33,178 | INFO     | chi2: 1.3881777839096325
[2026-03-04 13:54:37] 2026-03-04 12:53:33,179 | INFO     | sum of square deviations: 697054930.0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,179 | INFO     | sum of deviations: -16263612051.000004
[2026-03-04 13:54:37] 2026-03-04 12:53:33,179 | INFO     | mean x: 1772624509.0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,179 | INFO     | mean y: 2408689.854961832
[2026-03-04 13:54:37] 2026-03-04 12:53:33,180 | INFO     | intersect: 41361096629.22635
[2026-03-04 13:54:37] 2026-03-04 12:53:33,180 | INFO     | chi2: 1.382879861491837
[2026-03-04 13:54:37] 2026-03-04 12:53:33,180 | INFO     | current chi2=1.382879861491837 (change=0.38164581505364803 %)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,180 | INFO     | right removable region: 130
[2026-03-04 13:54:37] 2026-03-04 12:53:33,180 | INFO     | sum of square deviations: 697054930.0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,181 | INFO     | sum of deviations: -28639366715.0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,181 | INFO     | mean x: 1772624814.0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,181 | INFO     | mean y: 2427343.435114504
[2026-03-04 13:54:37] 2026-03-04 12:53:33,181 | INFO     | intersect: 72832917325.41496
[2026-03-04 13:54:37] 2026-03-04 12:53:33,181 | INFO     | chi2: 0.249764921578203
[2026-03-04 13:54:37] 2026-03-04 12:53:33,181 | INFO     | current chi2=0.249764921578203 (change=82.00771367520588 %)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,182 | INFO     | sum of square deviations: 620244187.5
[2026-03-04 13:54:37] 2026-03-04 12:53:33,182 | INFO     | sum of deviations: -22837381360.999992
[2026-03-04 13:54:37] 2026-03-04 12:53:33,182 | INFO     | mean x: 1772624966.5
[2026-03-04 13:54:37] 2026-03-04 12:53:33,183 | INFO     | mean y: 2415806.4603174604
[2026-03-04 13:54:37] 2026-03-04 12:53:33,183 | INFO     | intersect: 65270439571.68156
[2026-03-04 13:54:37] 2026-03-04 12:53:33,183 | INFO     | chi2: 0.23448404147473828
[2026-03-04 13:54:37] 2026-03-04 12:53:33,183 | INFO     | current chi2=0.23448404147473828 (change=6.118104979237512 %)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,183 | INFO     | left removable region: 20
[2026-03-04 13:54:37] 2026-03-04 12:53:33,183 | INFO     | sum of square deviations: 412686807.5
[2026-03-04 13:54:37] 2026-03-04 12:53:33,184 | INFO     | sum of deviations: -9386869283.000002
[2026-03-04 13:54:37] 2026-03-04 12:53:33,184 | INFO     | mean x: 1772625088.5
[2026-03-04 13:54:37] 2026-03-04 12:53:33,184 | INFO     | mean y: 2388158.4545454546
[2026-03-04 13:54:37] 2026-03-04 12:53:33,184 | INFO     | intersect: 40322068097.619576
[2026-03-04 13:54:37] 2026-03-04 12:53:33,184 | INFO     | chi2: 0.14218970135390352
[2026-03-04 13:54:37] 2026-03-04 12:53:33,184 | INFO     | current memory leak: -22.75 B/s (using 110 data points, chi2=0.14)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | could have reported an average CPU frequency of 2746 MHz (8 samples)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | ..............................
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . Timing measurements:
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . get job = 0 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . initial setup = 7 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . payload setup = 7 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . stage-in = 0 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . payload execution = 8268 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . stage-out = 0 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,185 | INFO     | . log creation = 0 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,186 | INFO     | ..............................
[2026-03-04 13:54:37] 2026-03-04 12:53:33,556 | INFO     | 
[2026-03-04 13:54:37] 2026-03-04 12:53:33,556 | INFO     | job summary report
[2026-03-04 13:54:37] 2026-03-04 12:53:33,556 | INFO     | --------------------------------------------------
[2026-03-04 13:54:37] 2026-03-04 12:53:33,556 | INFO     | PanDA job id: 7036701036
[2026-03-04 13:54:37] 2026-03-04 12:53:33,556 | INFO     | task id: 48838577
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | errors: (none)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | pilot state: finished 
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | transexitcode: 0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | exeerrorcode: 0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | exeerrordiag: 
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | exitcode: 0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | exitmsg: OK
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | cpuconsumptiontime: 31763 s
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | nevents: 400
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | neventsw: 0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | pid: 1822077
[2026-03-04 13:54:37] 2026-03-04 12:53:33,557 | INFO     | pgrp: 1822077
[2026-03-04 13:54:37] 2026-03-04 12:53:33,558 | INFO     | corecount: 4
[2026-03-04 13:54:37] 2026-03-04 12:53:33,558 | INFO     | event service: False
[2026-03-04 13:54:37] 2026-03-04 12:53:33,558 | INFO     | sizes: {0: 2287089, 11: 2287089, 8279: 2314931, 8280: 2323951, 8281: 2324007, 8283: 2324201}
[2026-03-04 13:54:37] 2026-03-04 12:53:33,558 | INFO     | --------------------------------------------------
[2026-03-04 13:54:37] 2026-03-04 12:53:33,558 | INFO     | 
[2026-03-04 13:54:37] 2026-03-04 12:53:33,558 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2026-03-04 13:54:37] 2026-03-04 12:53:33,583 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,585 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,585 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 13:54:37] 2026-03-04 12:53:33,585 | INFO     | job 7036701036 has completed (purged errors)
[2026-03-04 13:54:37] 2026-03-04 12:53:33,585 | INFO     | overall cleanup function is called
[2026-03-04 13:54:37] 2026-03-04 12:53:34,594 | INFO     | --- collectZombieJob: --- 10, [1822077]
[2026-03-04 13:54:37] 2026-03-04 12:53:34,594 | INFO     | zombie collector waiting for pid 1822077
[2026-03-04 13:54:37] 2026-03-04 12:53:34,595 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 13:54:37] 2026-03-04 12:53:34,595 | INFO     | collected zombie processes
[2026-03-04 13:54:37] 2026-03-04 12:53:34,595 | INFO     | will attempt to kill all subprocesses of pid=1822077
[2026-03-04 13:54:37] 2026-03-04 12:53:35,158 | INFO     | process IDs to be killed: [1822077] (in reverse order)
[2026-03-04 13:54:37] 2026-03-04 12:53:35,367 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 13:54:37] 2026-03-04 12:53:35,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 13:54:37] 2026-03-04 12:53:35,387 | INFO     | did not find any defunct processes belonging to 1822077
[2026-03-04 13:54:37] 2026-03-04 12:53:35,401 | INFO     | did not find any defunct processes belonging to 1822077
[2026-03-04 13:54:37] 2026-03-04 12:53:35,401 | INFO     | ready for new job
[2026-03-04 13:54:37] 2026-03-04 12:53:35,401 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 13:54:37] 2026-03-04 12:53:35,403 | INFO     | **************************************
[2026-03-04 13:54:37] 2026-03-04 12:53:35,404 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 13:54:37] 2026-03-04 12:53:35,404 | INFO     | **************************************
[2026-03-04 13:54:37] 2026-03-04 12:53:35,404 | INFO     | 
[2026-03-04 13:54:37] 2026-03-04 12:53:35,412 | INFO     | architecture information:
[2026-03-04 13:54:37] 2026-03-04 12:53:35,412 | INFO     | executing command: cat /etc/os-release
[2026-03-04 13:54:37] 2026-03-04 12:53:35,433 | INFO     | cat /etc/os-release:
[2026-03-04 13:54:37] NAME="CentOS Linux"
[2026-03-04 13:54:37] VERSION="7 (Core)"
[2026-03-04 13:54:37] ID="centos"
[2026-03-04 13:54:37] ID_LIKE="rhel fedora"
[2026-03-04 13:54:37] VERSION_ID="7"
[2026-03-04 13:54:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 13:54:37] ANSI_COLOR="0;31"
[2026-03-04 13:54:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 13:54:37] HOME_URL="https://www.centos.org/"
[2026-03-04 13:54:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 13:54:37] 
[2026-03-04 13:54:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 13:54:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 13:54:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 13:54:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 13:54:37] 
[2026-03-04 13:54:37] 2026-03-04 12:53:35,433 | INFO     | **************************************
[2026-03-04 13:54:37] 2026-03-04 12:53:35,935 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2026-03-04 13:54:37] 2026-03-04 12:53:35,958 | INFO     | sufficient remaining disk space (3314229968896 B)
[2026-03-04 13:54:37] 2026-03-04 12:53:35,958 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 13:54:37] 2026-03-04 12:53:35,958 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 13:54:37] 2026-03-04 12:53:35,958 | INFO     | update_server=False
[2026-03-04 13:54:37] 2026-03-04 12:53:35,958 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 13:54:37] 2026-03-04 12:53:36,013 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 13:54:37] 2026-03-04 12:53:36,027 | INFO     | all job control threads have been joined
[2026-03-04 13:54:37] 2026-03-04 12:53:36,071 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:54:37] 2026-03-04 12:53:36,071 | INFO     | aborting loop
[2026-03-04 13:54:37] 2026-03-04 12:53:36,222 | INFO     | all data control threads have been joined
[2026-03-04 13:54:37] 2026-03-04 12:53:36,964 | INFO     | [job] retrieve thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,033 | INFO     | [job] control thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,076 | INFO     | [job] job monitor thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,084 | INFO     | [payload] validate_post thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,229 | INFO     | [data] control thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,231 | INFO     | all payload control threads have been joined
[2026-03-04 13:54:37] 2026-03-04 12:53:37,376 | INFO     | [payload] failed_post thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,465 | INFO     | [job] validate thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 13:54:37] 2026-03-04 12:53:37,813 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:37,859 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:38,019 | INFO     | [data] copytool_out thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:38,097 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:38,236 | INFO     | [payload] control thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:38,276 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:54:37] 2026-03-04 12:53:38,297 | INFO     | [data] copytool_in thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:39,282 | INFO     | [job] queue monitor thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:41,618 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:53:46,348 | INFO     | job.realtimelogging is not enabled
[2026-03-04 13:54:37] 2026-03-04 12:53:47,353 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 13:54:37] 2026-03-04 12:54:05,348 | INFO     | PID=1817073 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 13:54:37] 2026-03-04 12:54:05,349 | INFO     | .. there are 19 such processes running
[2026-03-04 13:54:37] 2026-03-04 12:54:05,350 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 13:54:37] 2026-03-04 12:54:05,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 13:54:37] 2026-03-04 12:54:05,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 13:54:37] 2026-03-04 12:54:30,300 | INFO     | [monitor] cgroup control has ended
[2026-03-04 13:54:37] 2026-03-04 12:54:32,271 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23175105230656)>', '<ExcThread(monitor, started 23174866810624)>']
[2026-03-04 13:54:37] 2026-03-04 12:54:32,468 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 13:54:37] 2026-03-04 12:54:32,468 | INFO     | [monitor] control thread has ended
[2026-03-04 13:54:37] 2026-03-04 12:54:37,296 | INFO     | all workflow threads have been joined
[2026-03-04 13:54:37] 2026-03-04 12:54:37,296 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 13:54:37] 2026-03-04 12:54:37,297 | INFO     | traces error code: 0
[2026-03-04 13:54:37] 2026-03-04 12:54:37,297 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 13:54:37] 2026-03-04 12:54:37,430 [wrapper] ==== pilot stdout END ====
[2026-03-04 13:54:37] 2026-03-04 12:54:37,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 13:54:37] 2026-03-04 12:54:37,439 [wrapper] pilotpid: 1817073
[2026-03-04 13:54:37] 2026-03-04 12:54:37,443 [wrapper] Pilot exit status: 0
[2026-03-04 13:54:37] 2026-03-04 12:54:37,459 [wrapper] pandaids: 7036701036
[2026-03-04 13:54:37] 2026-03-04 12:54:37,603 [wrapper] cleanup supervisor_pilot 2110270 1817074
[2026-03-04 13:54:37] 2026-03-04 12:54:37,608 [wrapper] Test setup, not cleaning
[2026-03-04 13:54:37] 2026-03-04 12:54:37,612 [wrapper] apfmon messages muted
[2026-03-04 13:54:37] 2026-03-04 12:54:37,617 [wrapper] ==== wrapper stdout END ====
[2026-03-04 13:54:37] 2026-03-04 12:54:37,620 [wrapper] ==== wrapper stderr END ====
[2026-03-04 13:54:37]  *** Error codes and diagnostics ***
[2026-03-04 13:54:37]     "exeErrorCode": 0,
[2026-03-04 13:54:37]     "exeErrorDiag": "",
[2026-03-04 13:54:37]     "pilotErrorCode": 0,
[2026-03-04 13:54:37]     "pilotErrorDiag": "",
[2026-03-04 13:54:37]  *** Listing of results directory ***
[2026-03-04 13:54:37] total 513384
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc    584627 Mar  3 21:50 pilot3.tar.gz
[2026-03-04 13:54:37] -rwx------ 1 boinc boinc     36322 Mar  3 22:17 runpilot2-wrapper.sh
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc      5111 Mar  3 22:18 queuedata.json
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc       100 Mar  4 11:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 13:54:37] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 11:34 run_atlas
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc       105 Mar  4 11:34 job.xml
[2026-03-04 13:54:37] -rw-r--r-- 2 boinc boinc 290075824 Mar  4 11:34 EVNT.48220197._000191.pool.root.1
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc      6697 Mar  4 11:34 init_data.xml
[2026-03-04 13:54:37] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:34 start_atlas.sh
[2026-03-04 13:54:37] drwxrwx--x 2 boinc boinc      4096 Mar  4 11:34 shared
[2026-03-04 13:54:37] -rw-r--r-- 2 boinc boinc    597967 Mar  4 11:34 input.tar.gz
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc         0 Mar  4 11:34 boinc_lockfile
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc      2567 Mar  4 11:34 pandaJob.out
[2026-03-04 13:54:37] -rw------- 1 boinc boinc    997376 Mar  4 11:35 agis_schedconf.cvmfs.json
[2026-03-04 13:54:37] -rw------- 1 boinc boinc   1516092 Mar  4 11:35 agis_ddmendpoints.agis.ALL.json
[2026-03-04 13:54:37] -rw------- 1 boinc boinc       442 Mar  4 11:35 workernode_map.json
[2026-03-04 13:54:37] drwx------ 5 boinc boinc      4096 Mar  4 11:35 pilot3
[2026-03-04 13:54:37] -rw------- 1 boinc boinc 228728751 Mar  4 13:52 HITS.48838577._004877.pool.root.1
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc       530 Mar  4 13:53 boinc_task_state.xml
[2026-03-04 13:54:37] -rw------- 1 boinc boinc      1024 Mar  4 13:53 memory_monitor_summary.json
[2026-03-04 13:54:37] -rw------- 1 boinc boinc    315030 Mar  4 13:53 log.48838577._004877.job.log.tgz.1
[2026-03-04 13:54:37] -rw------- 1 boinc boinc      6346 Mar  4 13:53 heartbeat.json
[2026-03-04 13:54:37] -rw------- 1 boinc boinc        95 Mar  4 13:54 pilot_heartbeat.json
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc      8192 Mar  4 13:54 boinc_mmap_file
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc        27 Mar  4 13:54 wrapper_checkpoint.txt
[2026-03-04 13:54:37] -rw------- 1 boinc boinc      4903 Mar  4 13:54 pilotlog.txt
[2026-03-04 13:54:37] -rw------- 1 boinc boinc   1167595 Mar  4 13:54 log.48838577._004877.job.log.1
[2026-03-04 13:54:37] -rw------- 1 boinc boinc       357 Mar  4 13:54 output.list
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc       620 Mar  4 13:54 runtime_log
[2026-03-04 13:54:37] -rw------- 1 boinc boinc   1505280 Mar  4 13:54 result.tar.gz
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc      9204 Mar  4 13:54 runtime_log.err
[2026-03-04 13:54:37] -rw------- 1 boinc boinc       662 Mar  4 13:54 dwdMDmvImH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2nHLDmBDDlFo.diag
[2026-03-04 13:54:37] -rw-r--r-- 1 boinc boinc     21117 Mar  4 13:54 stderr.txt
[2026-03-04 13:54:37] HITS file was successfully produced:
[2026-03-04 13:54:37] -rw------- 1 boinc boinc 228728751 Mar  4 13:52 shared/HITS.pool.root.1
[2026-03-04 13:54:37]  *** Contents of shared directory: ***
[2026-03-04 13:54:37] total 508724
[2026-03-04 13:54:37] -rw-r--r-- 2 boinc boinc 290075824 Mar  4 11:34 ATLAS.root_0
[2026-03-04 13:54:37] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:34 start_atlas.sh
[2026-03-04 13:54:37] -rw-r--r-- 2 boinc boinc    597967 Mar  4 11:34 input.tar.gz
[2026-03-04 13:54:37] -rw------- 1 boinc boinc 228728751 Mar  4 13:52 HITS.pool.root.1
[2026-03-04 13:54:37] -rw------- 1 boinc boinc   1505280 Mar  4 13:54 result.tar.gz
13:54:39 (1812196): run_atlas exited; CPU time 32166.328423
13:54:39 (1812196): called boinc_finish(0)

</stderr_txt>
]]>

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