Stderr output

<core_client_version>7.9.3</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-04 09:56:11 (4580): vboxwrapper version 26210
2026-03-04 09:56:11 (4580): BOINC client version: 7.9.3
2026-03-04 09:56:11 (4580): Detected: VirtualBox VboxManage Interface (Version: 5.2.42)
2026-03-04 09:56:11 (4580): Successfully copied 'init_data.xml' to the shared directory.
2026-03-04 09:56:11 (4580): Create VM. (boinc_37ef138188f117c6, slot#0)
2026-03-04 09:56:11 (4580): Setting Memory Size for VM. (4100MB)
2026-03-04 09:56:11 (4580): Setting CPU Count for VM. (1)
2026-03-04 09:56:12 (4580): Setting Chipset Options for VM.
2026-03-04 09:56:12 (4580): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-04 09:56:12 (4580): Setting Boot Options for VM.
2026-03-04 09:56:12 (4580): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-04 09:56:12 (4580): Enabling VM Network Access.
2026-03-04 09:56:12 (4580): Disabling USB Support for VM.
2026-03-04 09:56:12 (4580): Disabling COM Port Support for VM.
2026-03-04 09:56:12 (4580): Disabling LPT Port Support for VM.
2026-03-04 09:56:12 (4580): Disabling Audio Support for VM.
2026-03-04 09:56:13 (4580): Disabling Clipboard Support for VM.
2026-03-04 09:56:13 (4580): Disabling Drag and Drop Support for VM.
2026-03-04 09:56:13 (4580): Adding storage controller(s) to VM.
2026-03-04 09:56:13 (4580): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-04 09:56:13 (4580): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-04 09:56:13 (4580): forwarding host port 32877 to guest port 80
2026-03-04 09:56:14 (4580): Enabling remote desktop for VM.
2026-03-04 09:56:14 (4580): Required extension pack not installed, remote desktop not enabled.
2026-03-04 09:56:14 (4580): Enabling shared directory for VM.
2026-03-04 09:56:14 (4580): Starting VM using VBoxManage interface. (boinc_37ef138188f117c6, slot#0)
2026-03-04 09:56:15 (4580): Successfully started VM. (PID = '4973')
2026-03-04 09:56:15 (4580): Reporting VM Process ID to BOINC.
2026-03-04 09:56:15 (4580): Guest Log: BIOS: VirtualBox 5.2.41
2026-03-04 09:56:15 (4580): Guest Log: CPUID EDX: 0x078bfbff
2026-03-04 09:56:15 (4580): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-04 09:56:15 (4580): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-04 09:56:15 (4580): Detected: Web Application Enabled (http://localhost:32877)
2026-03-04 09:56:15 (4580): Preference change detected
2026-03-04 09:56:15 (4580): Setting CPU throttle for VM. (49%)
2026-03-04 09:56:15 (4580): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-04 09:56:17 (4580): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-04 09:56:17 (4580): Guest Log: BIOS: Booting from Hard Disk...
2026-03-04 09:56:22 (4580): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-04 09:56:22 (4580): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-04 09:56:22 (4580): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-04 09:56:32 (4580): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-04 09:56:32 (4580): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-04 09:56:57 (4580): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.000277 main     Log opened 2026-03-03T22:56:55.659921000Z
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.000508 main     OS Product: Linux
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.000582 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.000642 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.000734 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.000736 main     Process ID: 1240
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.000738 main     Package type: LINUX_64BITS_GENERIC
2026-03-04 09:56:57 (4580): Guest Log: 00:00:00.004463 main     5.2.32 r132073 started. Verbose level = 0
2026-03-04 09:56:58 (4580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-04 09:56:58 (4580): Guest Log: [INFO] Mounting shared directory
2026-03-04 09:56:58 (4580): Guest Log: [INFO] Checking for init_data.xml
2026-03-04 09:57:32 (4580): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-04 09:57:32 (4580): Guest Log: [INFO] Detected branch: prod
2026-03-04 09:57:33 (4580): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-04 09:57:33 (4580): Guest Log: Copying input files
2026-03-04 09:57:35 (4580): Guest Log: Copied input files into RunAtlas.
2026-03-04 09:57:35 (4580): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-04 09:57:35 (4580): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-04 09:57:35 (4580): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-04 09:57:36 (4580): Guest Log: Further information can be found at the LHC@home message board.
2026-03-04 09:58:41 (4580): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-04 09:58:42 (4580): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-04 09:58:42 (4580): Guest Log: 2.6.3.0 1534 1 30052 156859 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-04 09:58:44 (4580): Guest Log: copied the webapp to /var/www
2026-03-04 09:58:44 (4580): Guest Log: core_number=1
2026-03-04 09:58:44 (4580): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-04 09:58:44 (4580): Guest Log:  *** Starting ATLAS job. (PandaID=7036599426 taskID=48700946) ***
2026-03-04 11:35:15 (4580): Status Report: Elapsed Time: '6000.000000'
2026-03-04 11:35:15 (4580): Status Report: CPU Time: '2797.580000'
2026-03-04 13:14:16 (4580): Status Report: Elapsed Time: '12000.000000'
2026-03-04 13:14:16 (4580): Status Report: CPU Time: '5745.310000'
2026-03-04 14:53:16 (4580): Status Report: Elapsed Time: '18000.000000'
2026-03-04 14:53:16 (4580): Status Report: CPU Time: '8693.090000'
2026-03-04 16:32:17 (4580): Status Report: Elapsed Time: '24000.000000'
2026-03-04 16:32:17 (4580): Status Report: CPU Time: '11640.620000'
2026-03-04 18:11:17 (4580): Status Report: Elapsed Time: '30000.000000'
2026-03-04 18:11:17 (4580): Status Report: CPU Time: '14588.180000'
2026-03-04 19:50:18 (4580): Status Report: Elapsed Time: '36000.000000'
2026-03-04 19:50:18 (4580): Status Report: CPU Time: '17536.000000'
2026-03-04 21:29:18 (4580): Status Report: Elapsed Time: '42000.000000'
2026-03-04 21:29:18 (4580): Status Report: CPU Time: '20483.820000'
2026-03-04 23:08:18 (4580): Status Report: Elapsed Time: '48000.000000'
2026-03-04 23:08:18 (4580): Status Report: CPU Time: '23431.520000'
2026-03-05 00:47:19 (4580): Status Report: Elapsed Time: '54000.000000'
2026-03-05 00:47:19 (4580): Status Report: CPU Time: '26379.070000'
2026-03-05 02:26:19 (4580): Status Report: Elapsed Time: '60000.000000'
2026-03-05 02:26:19 (4580): Status Report: CPU Time: '29326.750000'
2026-03-05 04:05:20 (4580): Status Report: Elapsed Time: '66000.000000'
2026-03-05 04:05:20 (4580): Status Report: CPU Time: '32274.490000'
2026-03-05 05:13:30 (4580): Guest Log:  *** Job finished ***
2026-03-05 05:13:30 (4580): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:12:57,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:12:57,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:23,440 | INFO     | [monitor] cgroup control has ended
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:23,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139734253561664)>', '<ExcThread(monitor, started 139733598463744)>']
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:24,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:24,500 | INFO     | [monitor] control thread has ended
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,611 | INFO     | all workflow threads have been joined
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,611 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,612 | INFO     | traces error code: 0
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,612 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,816 [wrapper] ==== pilot stdout END ====
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,820 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,824 [wrapper] pilotpid: 5913
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,828 [wrapper] Pilot exit status: 0
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,911 [wrapper] pandaids: 7036599426
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,935 [wrapper] cleanup supervisor_pilot 11581 5914
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,939 [wrapper] Test setup, not cleaning
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,942 [wrapper] apfmon messages muted
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,946 [wrapper] ==== wrapper stdout END ====
2026-03-05 05:13:30 (4580): Guest Log: 2026-03-04 18:13:28,950 [wrapper] ==== wrapper stderr END ====
2026-03-05 05:13:30 (4580): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 05:13:30 (4580): Guest Log:     "exeErrorCode": 0,
2026-03-05 05:13:30 (4580): Guest Log:     "exeErrorDiag": "",
2026-03-05 05:13:30 (4580): Guest Log:     "pilotErrorCode": 0,
2026-03-05 05:13:30 (4580): Guest Log:     "pilotErrorDiag": "",
2026-03-05 05:13:30 (4580): Guest Log:  *** Listing of results directory ***
2026-03-05 05:13:30 (4580): Guest Log: total 163276
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  3 19:48 pilot3.tar.gz
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  3 20:48 queuedata.json
2026-03-05 05:13:30 (4580): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  3 20:49 runpilot2-wrapper.sh
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar  3 22:57 start_atlas.sh
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas      5889 Mar  3 22:57 init_data.xml
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas    597933 Mar  3 22:57 input.tar.gz
2026-03-05 05:13:30 (4580): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  3 22:57 EVNT.48700944._000132.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas      2500 Mar  3 22:58 pandaJob.out
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas    998484 Mar  3 23:00 agis_schedconf.cvmfs.json
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas       425 Mar  3 23:00 workernode_map.json
2026-03-05 05:13:30 (4580): Guest Log: drwx------. 5 atlas atlas      4096 Mar  3 23:00 pilot3
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas 142895928 Mar  4 18:11 HITS.48700946._003380.pool.root.1
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas      1025 Mar  4 18:12 memory_monitor_summary.json
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas        95 Mar  4 18:12 pilot_heartbeat.json
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  4 18:12 agis_ddmendpoints.agis.ALL.json
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas   1026183 Mar  4 18:12 log.48700946._003380.job.log.tgz.1
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas      6358 Mar  4 18:12 heartbeat.json
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  4 18:13 pilotlog.txt
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas   9188561 Mar  4 18:13 log.48700946._003380.job.log.1
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas       357 Mar  4 18:13 output.list
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  4 18:13 runtime_log
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas  10229760 Mar  4 18:13 result.tar.gz
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 atlas atlas      8610 Mar  4 18:13 runtime_log.err
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas       650 Mar  4 18:13 3uCMDmIrlH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmbbHLDmHOy1Wo.diag
2026-03-05 05:13:30 (4580): Guest Log: Looking for outputfile HITS.48700946._003380.pool.root.1
2026-03-05 05:13:30 (4580): Guest Log: HITS file was successfully produced
2026-03-05 05:13:30 (4580): Guest Log: -rw-------. 1 atlas atlas 142895928 Mar  4 18:11 /home/atlas/RunAtlas/HITS.48700946._003380.pool.root.1
2026-03-05 05:13:30 (4580): Guest Log: Successfully finished the ATLAS job!
2026-03-05 05:13:30 (4580): Guest Log: Copying the results back to the shared directory!
2026-03-05 05:13:30 (4580): Guest Log:  *** Contents of shared directory: ***
2026-03-05 05:13:30 (4580): Guest Log: total 194948
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 root root 188766519 Mar  3 22:56 ATLAS.root_0
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 root root      5889 Mar  3 22:56 init_data.xml
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 root root    597933 Mar  3 22:56 input.tar.gz
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 root root  10229760 Mar  4 18:13 result.tar.gz
2026-03-05 05:13:30 (4580): Guest Log: -rw-r--r--. 1 root root     15845 Mar  3 22:56 start_atlas.sh
2026-03-05 05:13:30 (4580): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 05:13:30 (4580): VM Completion File Detected.
2026-03-05 05:13:30 (4580): Powering off VM.
2026-03-05 05:13:31 (4580): Successfully stopped VM.
2026-03-05 05:13:31 (4580): Deregistering VM. (boinc_37ef138188f117c6, slot#0)
2026-03-05 05:13:31 (4580): Removing network bandwidth throttle group from VM.
2026-03-05 05:13:31 (4580): Removing VM from VirtualBox.
2026-03-05 05:13:36 (4580): called boinc_finish(0)

</stderr_txt>
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