Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:48:10 (943492): wrapper (7.7.26015): starting
17:48:10 (943492): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 17:48:10] Arguments: --nthreads 8
[2026-03-03 17:48:10] Threads: 8
[2026-03-03 17:48:10] Checking for CVMFS
[2026-03-03 17:48:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 17:48:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 17:48:10] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 17:48:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 17:48:11] 2.13.3.0 4282 90773 281864 156859 0 82 20670325 39288833 4568 16776704 0 43457293 99.728 54396831 37248 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 17:48:11] CVMFS is ok
[2026-03-03 17:48:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 17:48:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 17:48:11] Further information can be found at the LHC@home message board.
[2026-03-03 17:48:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 17:48:11] Checking for apptainer binary...
[2026-03-03 17:48:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 17:48:11] Running /usr/bin/apptainer --version
[2026-03-03 17:48:11] apptainer version 1.4.5-2.el9
[2026-03-03 17:48:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 17:48:11] c-211-32.aglt2.org
[2026-03-03 17:48:11] apptainer works
[2026-03-03 17:48:11] Set ATHENA_PROC_NUMBER=8
[2026-03-03 17:48:11] Set ATHENA_CORE_NUMBER=8
[2026-03-03 17:48:11] Starting ATLAS job with PandaID=7036587292
[2026-03-03 17:48:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 21:07:57]  *** The last 200 lines of the pilot log: ***
[2026-03-03 21:07:57] 2026-03-04 02:06:54,961 | INFO     | preparing for final server update for job 7036587292 in state='finished'
[2026-03-03 21:07:57] 2026-03-04 02:06:55,035 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,036 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036587292/jobReport.json
[2026-03-03 21:07:57] 2026-03-04 02:06:55,039 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 21:07:57] 2026-03-04 02:06:55,039 | INFO     | this job has now completed (state=finished)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,039 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,040 | INFO     | log transfer has been attempted: DONE
[2026-03-03 21:07:57] 2026-03-04 02:06:55,040 | INFO     | job 7036587292 has finished - writing final server update
[2026-03-03 21:07:57] 2026-03-04 02:06:55,040 | INFO     | total number of processed events: 400 (read)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,048 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036587292/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,049 | INFO     | extracted standard info from prmon json
[2026-03-03 21:07:57] 2026-03-04 02:06:55,049 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 21:07:57] 2026-03-04 02:06:55,049 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 21:07:57] 2026-03-04 02:06:55,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 21:07:57] 2026-03-04 02:06:55,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 21:07:57] 2026-03-04 02:06:55,056 | INFO     | fitting pss+swap vs Time
[2026-03-03 21:07:57] 2026-03-04 02:06:55,056 | INFO     | sum of square deviations: 2299168690.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,058 | INFO     | sum of deviations: 21484709533.000008
[2026-03-03 21:07:57] 2026-03-04 02:06:55,058 | INFO     | mean x: 1772584054.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,058 | INFO     | mean y: 2526166.8205128205
[2026-03-03 21:07:57] 2026-03-04 02:06:55,058 | INFO     | intersect: -16561483985.482666
[2026-03-03 21:07:57] 2026-03-04 02:06:55,059 | INFO     | chi2: 1.4692420828428878
[2026-03-03 21:07:57] 2026-03-04 02:06:55,059 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 21:07:57] 2026-03-04 02:06:55,061 | INFO     | sum of deviations: 20694864026.00001
[2026-03-03 21:07:57] 2026-03-04 02:06:55,061 | INFO     | mean x: 1772583901.5
[2026-03-03 21:07:57] 2026-03-04 02:06:55,061 | INFO     | mean y: 2525468.252631579
[2026-03-03 21:07:57] 2026-03-04 02:06:55,061 | INFO     | intersect: -17245611078.115086
[2026-03-03 21:07:57] 2026-03-04 02:06:55,062 | INFO     | chi2: 1.4702613101208297
[2026-03-03 21:07:57] 2026-03-04 02:06:55,062 | INFO     | current chi2=1.4702613101208297 (change=-0.06937095594006978 %)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,062 | INFO     | right removable region: 189
[2026-03-03 21:07:57] 2026-03-04 02:06:55,063 | INFO     | sum of square deviations: 2126802667.5
[2026-03-03 21:07:57] 2026-03-04 02:06:55,064 | INFO     | sum of deviations: -5578210331.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,064 | INFO     | mean x: 1772584206.5
[2026-03-03 21:07:57] 2026-03-04 02:06:55,064 | INFO     | mean y: 2549785.042105263
[2026-03-03 21:07:57] 2026-03-04 02:06:55,065 | INFO     | intersect: 4651710557.860131
[2026-03-03 21:07:57] 2026-03-04 02:06:55,065 | INFO     | chi2: 0.10846038835716716
[2026-03-03 21:07:57] 2026-03-04 02:06:55,065 | INFO     | current chi2=0.10846038835716716 (change=92.61793617105609 %)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,066 | INFO     | sum of square deviations: 1963274020.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,067 | INFO     | sum of deviations: -5066432286.999995
[2026-03-03 21:07:57] 2026-03-04 02:06:55,067 | INFO     | mean x: 1772584359.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,067 | INFO     | mean y: 2549306.4918918917
[2026-03-03 21:07:57] 2026-03-04 02:06:55,068 | INFO     | intersect: 4576887140.325597
[2026-03-03 21:07:57] 2026-03-04 02:06:55,068 | INFO     | chi2: 0.1084697791221026
[2026-03-03 21:07:57] 2026-03-04 02:06:55,068 | INFO     | current chi2=0.1084697791221026 (change=-0.008658243878408443 %)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,068 | INFO     | left removable region: 20
[2026-03-03 21:07:57] 2026-03-04 02:06:55,069 | INFO     | sum of square deviations: 1496660620.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,070 | INFO     | sum of deviations: 4616230327.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,070 | INFO     | mean x: 1772584481.0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,070 | INFO     | mean y: 2538885.6153846155
[2026-03-03 21:07:57] 2026-03-04 02:06:55,071 | INFO     | intersect: -5464738150.351363
[2026-03-03 21:07:57] 2026-03-04 02:06:55,071 | INFO     | chi2: 0.0018865918808803302
[2026-03-03 21:07:57] 2026-03-04 02:06:55,071 | INFO     | current memory leak: 3.08 B/s (using 169 data points, chi2=0.00)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,072 | INFO     | could have reported an average CPU frequency of 2899 MHz (10 samples)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,072 | INFO     | ..............................
[2026-03-03 21:07:57] 2026-03-04 02:06:55,072 | INFO     | . Timing measurements:
[2026-03-03 21:07:57] 2026-03-04 02:06:55,072 | INFO     | . get job = 0 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,072 | INFO     | . initial setup = 7 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,073 | INFO     | . payload setup = 7 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,073 | INFO     | . stage-in = 0 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,073 | INFO     | . payload execution = 11877 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,073 | INFO     | . stage-out = 2 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,073 | INFO     | . log creation = 0 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,073 | INFO     | ..............................
[2026-03-03 21:07:57] 2026-03-04 02:06:55,406 | INFO     | 
[2026-03-03 21:07:57] 2026-03-04 02:06:55,406 | INFO     | job summary report
[2026-03-03 21:07:57] 2026-03-04 02:06:55,406 | INFO     | --------------------------------------------------
[2026-03-03 21:07:57] 2026-03-04 02:06:55,407 | INFO     | PanDA job id: 7036587292
[2026-03-03 21:07:57] 2026-03-04 02:06:55,407 | INFO     | task id: 48868979
[2026-03-03 21:07:57] 2026-03-04 02:06:55,407 | INFO     | errors: (none)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,407 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 21:07:57] 2026-03-04 02:06:55,407 | INFO     | pilot state: finished 
[2026-03-03 21:07:57] 2026-03-04 02:06:55,407 | INFO     | transexitcode: 0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,407 | INFO     | exeerrorcode: 0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,408 | INFO     | exeerrordiag: 
[2026-03-03 21:07:57] 2026-03-04 02:06:55,408 | INFO     | exitcode: 0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,408 | INFO     | exitmsg: OK
[2026-03-03 21:07:57] 2026-03-04 02:06:55,408 | INFO     | cpuconsumptiontime: 85098 s
[2026-03-03 21:07:57] 2026-03-04 02:06:55,408 | INFO     | nevents: 400
[2026-03-03 21:07:57] 2026-03-04 02:06:55,408 | INFO     | neventsw: 0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,409 | INFO     | pid: 951920
[2026-03-03 21:07:57] 2026-03-04 02:06:55,409 | INFO     | pgrp: 951920
[2026-03-03 21:07:57] 2026-03-04 02:06:55,409 | INFO     | corecount: 8
[2026-03-03 21:07:57] 2026-03-04 02:06:55,409 | INFO     | event service: False
[2026-03-03 21:07:57] 2026-03-04 02:06:55,409 | INFO     | sizes: {0: 2285966, 1: 2286651, 2: 2287112, 13: 2287112, 11889: 2316525, 11891: 2325845}
[2026-03-03 21:07:57] 2026-03-04 02:06:55,409 | INFO     | --------------------------------------------------
[2026-03-03 21:07:57] 2026-03-04 02:06:55,410 | INFO     | 
[2026-03-03 21:07:57] 2026-03-04 02:06:55,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 21:07:57] 2026-03-04 02:06:55,430 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,430 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,430 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,431 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,432 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,432 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,432 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,432 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,432 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,432 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,433 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,433 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,433 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,433 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,433 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 21:07:57] 2026-03-04 02:06:55,434 | INFO     | job 7036587292 has completed (purged errors)
[2026-03-03 21:07:57] 2026-03-04 02:06:55,434 | INFO     | overall cleanup function is called
[2026-03-03 21:07:57] 2026-03-04 02:06:55,949 | INFO     | PID=947146 has CPU usage=14.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 21:07:57] 2026-03-04 02:06:55,949 | INFO     | .. there are 5 such processes running
[2026-03-03 21:07:57] 2026-03-04 02:06:56,443 | INFO     | --- collectZombieJob: --- 10, [951920]
[2026-03-03 21:07:57] 2026-03-04 02:06:56,443 | INFO     | zombie collector waiting for pid 951920
[2026-03-03 21:07:57] 2026-03-04 02:06:56,444 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 21:07:57] 2026-03-04 02:06:56,444 | INFO     | collected zombie processes
[2026-03-03 21:07:57] 2026-03-04 02:06:56,444 | INFO     | will attempt to kill all subprocesses of pid=951920
[2026-03-03 21:07:57] 2026-03-04 02:06:56,726 | INFO     | process IDs to be killed: [951920] (in reverse order)
[2026-03-03 21:07:57] 2026-03-04 02:06:56,801 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 21:07:57] 2026-03-04 02:06:56,802 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 21:07:57] 2026-03-04 02:06:56,813 | INFO     | did not find any defunct processes belonging to 951920
[2026-03-03 21:07:57] 2026-03-04 02:06:56,822 | INFO     | did not find any defunct processes belonging to 951920
[2026-03-03 21:07:57] 2026-03-04 02:06:56,823 | INFO     | ready for new job
[2026-03-03 21:07:57] 2026-03-04 02:06:56,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 21:07:57] 2026-03-04 02:06:56,825 | INFO     | **************************************
[2026-03-03 21:07:57] 2026-03-04 02:06:56,826 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 21:07:57] 2026-03-04 02:06:56,826 | INFO     | **************************************
[2026-03-03 21:07:57] 2026-03-04 02:06:56,826 | INFO     | 
[2026-03-03 21:07:57] 2026-03-04 02:06:56,828 | INFO     | architecture information:
[2026-03-03 21:07:57] 2026-03-04 02:06:56,829 | INFO     | executing command: cat /etc/os-release
[2026-03-03 21:07:57] 2026-03-04 02:06:56,841 | INFO     | cat /etc/os-release:
[2026-03-03 21:07:57] NAME="CentOS Linux"
[2026-03-03 21:07:57] VERSION="7 (Core)"
[2026-03-03 21:07:57] ID="centos"
[2026-03-03 21:07:57] ID_LIKE="rhel fedora"
[2026-03-03 21:07:57] VERSION_ID="7"
[2026-03-03 21:07:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 21:07:57] ANSI_COLOR="0;31"
[2026-03-03 21:07:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 21:07:57] HOME_URL="https://www.centos.org/"
[2026-03-03 21:07:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 21:07:57] 
[2026-03-03 21:07:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 21:07:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 21:07:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 21:07:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 21:07:57] 
[2026-03-03 21:07:57] 2026-03-04 02:06:56,842 | INFO     | **************************************
[2026-03-03 21:07:57] 2026-03-04 02:06:57,345 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 21:07:57] 2026-03-04 02:06:57,362 | INFO     | sufficient remaining disk space (51004833792 B)
[2026-03-03 21:07:57] 2026-03-04 02:06:57,362 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 21:07:57] 2026-03-04 02:06:57,363 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 21:07:57] 2026-03-04 02:06:57,363 | INFO     | update_server=False
[2026-03-03 21:07:57] 2026-03-04 02:06:57,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 21:07:57] 2026-03-04 02:06:57,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 21:07:57] 2026-03-04 02:06:57,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:07:57] 2026-03-04 02:06:57,364 | INFO     | aborting loop
[2026-03-03 21:07:57] 2026-03-04 02:06:57,807 | INFO     | all data control threads have been joined
[2026-03-03 21:07:57] 2026-03-04 02:06:57,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 21:07:57] 2026-03-04 02:06:58,181 | INFO     | all payload control threads have been joined
[2026-03-03 21:07:57] 2026-03-04 02:06:58,368 | INFO     | [job] retrieve thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:58,369 | INFO     | [job] job monitor thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:58,655 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:58,812 | INFO     | [data] control thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:58,818 | INFO     | all job control threads have been joined
[2026-03-03 21:07:57] 2026-03-04 02:06:58,925 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,012 | INFO     | [data] copytool_in thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,047 | INFO     | [payload] failed_post thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,186 | INFO     | [payload] control thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,371 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,782 | INFO     | [job] validate thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,807 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,818 | INFO     | [data] copytool_out thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,824 | INFO     | [job] control thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:06:59,967 | INFO     | [payload] validate_post thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:07:00,230 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 21:07:57] 2026-03-04 02:07:01,235 | INFO     | [job] queue monitor thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:07:01,369 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 21:07:57] 2026-03-04 02:07:28,307 | INFO     | PID=947146 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 21:07:57] 2026-03-04 02:07:28,307 | INFO     | .. there are 5 such processes running
[2026-03-03 21:07:57] 2026-03-04 02:07:28,308 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 21:07:57] 2026-03-04 02:07:28,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 21:07:57] 2026-03-04 02:07:28,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 21:07:57] 2026-03-04 02:07:50,255 | INFO     | [monitor] cgroup control has ended
[2026-03-03 21:07:57] 2026-03-04 02:07:52,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343589168960)>', '<ExcThread(monitor, started 140343198598912)>']
[2026-03-03 21:07:57] 2026-03-04 02:07:52,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 21:07:57] 2026-03-04 02:07:52,431 | INFO     | [monitor] control thread has ended
[2026-03-03 21:07:57] 2026-03-04 02:07:57,351 | INFO     | all workflow threads have been joined
[2026-03-03 21:07:57] 2026-03-04 02:07:57,351 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 21:07:57] 2026-03-04 02:07:57,352 | INFO     | traces error code: 0
[2026-03-03 21:07:57] 2026-03-04 02:07:57,352 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 21:07:57] 2026-03-04 02:07:57,471 [wrapper] ==== pilot stdout END ====
[2026-03-03 21:07:57] 2026-03-04 02:07:57,475 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 21:07:57] 2026-03-04 02:07:57,477 [wrapper] pilotpid: 947146
[2026-03-03 21:07:57] 2026-03-04 02:07:57,480 [wrapper] Pilot exit status: 0
[2026-03-03 21:07:57] 2026-03-04 02:07:57,491 [wrapper] pandaids: 7036587292
[2026-03-03 21:07:57] 2026-03-04 02:07:57,544 [wrapper] cleanup supervisor_pilot 1231741 947147
[2026-03-03 21:07:57] 2026-03-04 02:07:57,548 [wrapper] Test setup, not cleaning
[2026-03-03 21:07:57] 2026-03-04 02:07:57,550 [wrapper] apfmon messages muted
[2026-03-03 21:07:57] 2026-03-04 02:07:57,553 [wrapper] ==== wrapper stdout END ====
[2026-03-03 21:07:57] 2026-03-04 02:07:57,556 [wrapper] ==== wrapper stderr END ====
[2026-03-03 21:07:57]  *** Error codes and diagnostics ***
[2026-03-03 21:07:57]     "exeErrorCode": 0,
[2026-03-03 21:07:57]     "exeErrorDiag": "",
[2026-03-03 21:07:57]     "pilotErrorCode": 0,
[2026-03-03 21:07:57]     "pilotErrorDiag": "",
[2026-03-03 21:07:57]  *** Listing of results directory ***
[2026-03-03 21:07:57] total 509000
[2026-03-03 21:07:57] -rwx------. 1 boincer umatlas     36322 Mar  3 15:49 runpilot2-wrapper.sh
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 15:50 pilot3.tar.gz
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 15:50 queuedata.json
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas       100 Mar  3 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 21:07:57] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 17:48 run_atlas
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas       105 Mar  3 17:48 job.xml
[2026-03-03 21:07:57] -rw-r--r--. 2 boincer umatlas 296343569 Mar  3 17:48 EVNT.48717036._000035.pool.root.1
[2026-03-03 21:07:57] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 17:48 start_atlas.sh
[2026-03-03 21:07:57] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 17:48 shared
[2026-03-03 21:07:57] -rw-r--r--. 2 boincer umatlas    597965 Mar  3 17:48 input.tar.gz
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas         0 Mar  3 17:48 boinc_lockfile
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas      2594 Mar  3 17:48 pandaJob.out
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas        57 Mar  3 17:48 setup.sh.local
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas    998484 Mar  3 17:48 agis_schedconf.cvmfs.json
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas       442 Mar  3 17:48 workernode_map.json
[2026-03-03 21:07:57] drwx------. 5 boincer umatlas      4096 Mar  3 17:48 pilot3
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas      6526 Mar  3 21:00 init_data.xml
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas 216759228 Mar  3 21:06 HITS.48868979._000863.pool.root.1
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas       530 Mar  3 21:06 boinc_task_state.xml
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas      1036 Mar  3 21:06 memory_monitor_summary.json
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas   1516092 Mar  3 21:06 agis_ddmendpoints.agis.ALL.json
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas    431084 Mar  3 21:06 log.48868979._000863.job.log.tgz.1
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas      6371 Mar  3 21:06 heartbeat.json
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas        95 Mar  3 21:07 pilot_heartbeat.json
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 21:07 boinc_mmap_file
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas        28 Mar  3 21:07 wrapper_checkpoint.txt
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas      4818 Mar  3 21:07 pilotlog.txt
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas   1656654 Mar  3 21:07 log.48868979._000863.job.log.1
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas       357 Mar  3 21:07 output.list
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas       620 Mar  3 21:07 runtime_log
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas   2109440 Mar  3 21:07 result.tar.gz
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas      9342 Mar  3 21:07 runtime_log.err
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas       655 Mar  3 21:07 elyMDmlrlH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm8eHLDm2Bw3Ln.diag
[2026-03-03 21:07:57] -rw-r--r--. 1 boincer umatlas     21347 Mar  3 21:07 stderr.txt
[2026-03-03 21:07:57] HITS file was successfully produced:
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas 216759228 Mar  3 21:06 shared/HITS.pool.root.1
[2026-03-03 21:07:57]  *** Contents of shared directory: ***
[2026-03-03 21:07:57] total 503744
[2026-03-03 21:07:57] -rw-r--r--. 2 boincer umatlas 296343569 Mar  3 17:48 ATLAS.root_0
[2026-03-03 21:07:57] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 17:48 start_atlas.sh
[2026-03-03 21:07:57] -rw-r--r--. 2 boincer umatlas    597965 Mar  3 17:48 input.tar.gz
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas 216759228 Mar  3 21:06 HITS.pool.root.1
[2026-03-03 21:07:57] -rw-------. 1 boincer umatlas   2109440 Mar  3 21:07 result.tar.gz
21:07:59 (943492): run_atlas exited; CPU time 85412.183381
21:07:59 (943492): called boinc_finish(0)

</stderr_txt>
]]>

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