Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:38:02 (2643289): wrapper (7.7.26015): starting
05:38:02 (2643289): wrapper: running run_atlas (--nthreads 4)
[2026-03-05 05:38:02] Arguments: --nthreads 4
[2026-03-05 05:38:02] Threads: 4
[2026-03-05 05:38:02] Checking for CVMFS
[2026-03-05 05:38:02] No cvmfs_config command found, will try listing directly
[2026-03-05 05:38:02] CVMFS is ok
[2026-03-05 05:38:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-05 05:38:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-05 05:38:02] Further information can be found at the LHC@home message board.
[2026-03-05 05:38:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-05 05:38:02] Checking for apptainer binary...
[2026-03-05 05:38:02] which: no apptainer in ((null))
[2026-03-05 05:38:02] apptainer is not installed, using version from CVMFS
[2026-03-05 05:38:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-05 05:38:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot164/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-05 05:38:02] apptainer works
[2026-03-05 05:38:02] Set ATHENA_PROC_NUMBER=4
[2026-03-05 05:38:02] Set ATHENA_CORE_NUMBER=4
[2026-03-05 05:38:02] Starting ATLAS job with PandaID=7036755670
[2026-03-05 05:38:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot164/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-05 07:18:30]  *** The last 200 lines of the pilot log: ***
[2026-03-05 07:18:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-05 07:18:30]  is_altstaged=None
[2026-03-05 07:18:30]  is_tar=False
[2026-03-05 07:18:30]  lfn=log.48838577._006379.job.log.tgz.1
[2026-03-05 07:18:30]  mtime=0
[2026-03-05 07:18:30]  protocol_id=None
[2026-03-05 07:18:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-05 07:18:30]  replicas=None
[2026-03-05 07:18:30]  scope=mc23_13p6TeV
[2026-03-05 07:18:30]  status=None
[2026-03-05 07:18:30]  status_code=0
[2026-03-05 07:18:30]  storage_token=
[2026-03-05 07:18:30]  surl=/var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7036755670/log.48838577._006379.job.log.tgz.1
[2026-03-05 07:18:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/76/log.48838577._006379.job.log.tgz.1
[2026-03-05 07:18:30]  workdir=None
[2026-03-05 07:18:30] ]
[2026-03-05 07:18:30] 2026-03-05 06:17:41,877 | INFO     | transferring file log.48838577._006379.job.log.tgz.1 from /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7036755670/log.48838577._006379.job.log.tgz.1 to /var/lib/
[2026-03-05 07:18:30] 2026-03-05 06:17:41,877 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7036755670/log.48838577._006379.job.log.tgz.1 /var/lib/boinc/var/slot164/slots/0/
[2026-03-05 07:18:30] 2026-03-05 06:17:41,895 | INFO     | adding to output.list: log.48838577._006379.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/76/log.48838577._006379.job.log.tg
[2026-03-05 07:18:30] 2026-03-05 06:17:41,896 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-05 07:18:30] 2026-03-05 06:17:41,896 | INFO     | summary of transferred files:
[2026-03-05 07:18:30] 2026-03-05 06:17:41,896 | INFO     |  -- lfn=log.48838577._006379.job.log.tgz.1, status_code=0, status=transferred
[2026-03-05 07:18:30] 2026-03-05 06:17:41,896 | INFO     | stage-out finished correctly
[2026-03-05 07:18:30] 2026-03-05 06:17:43,094 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-05 07:18:30] 2026-03-05 06:17:43,236 | INFO     | time since job start (5968s) is within the limit (349056.0s)
[2026-03-05 07:18:30] 2026-03-05 06:17:44,945 | INFO     | job 7036755670 has state=finished
[2026-03-05 07:18:30] 2026-03-05 06:17:44,945 | INFO     | preparing for final server update for job 7036755670 in state='finished'
[2026-03-05 07:18:30] 2026-03-05 06:17:44,945 | INFO     | reading metadata from: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7036755670/jobReport.json
[2026-03-05 07:18:30] 2026-03-05 06:17:44,947 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot164/slots/0/workernode_map.json
[2026-03-05 07:18:30] 2026-03-05 06:17:44,947 | INFO     | this job has now completed (state=finished)
[2026-03-05 07:18:30] 2026-03-05 06:17:44,947 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-05 07:18:30] 2026-03-05 06:17:44,948 | INFO     | log transfer has been attempted: DONE
[2026-03-05 07:18:30] 2026-03-05 06:17:44,948 | INFO     | job 7036755670 has finished - writing final server update
[2026-03-05 07:18:30] 2026-03-05 06:17:44,948 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_546778/.job.ad'
[2026-03-05 07:18:30] 2026-03-05 06:17:44,948 | INFO     | total number of processed events: 400 (read)
[2026-03-05 07:18:30] 2026-03-05 06:17:44,967 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7036755670/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:18:30] 2026-03-05 06:17:44,967 | INFO     | extracted standard info from prmon json
[2026-03-05 07:18:30] 2026-03-05 06:17:44,967 | INFO     | extracted standard memory fields from prmon json
[2026-03-05 07:18:30] 2026-03-05 06:17:44,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-05 07:18:30] 2026-03-05 06:17:44,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-05 07:18:30] 2026-03-05 06:17:44,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-05 07:18:30] 2026-03-05 06:17:44,969 | INFO     | fitting pss+swap vs Time
[2026-03-05 07:18:30] 2026-03-05 06:17:44,970 | INFO     | sum of square deviations: 233641590.0
[2026-03-05 07:18:30] 2026-03-05 06:17:44,970 | INFO     | sum of deviations: -19410200.000000015
[2026-03-05 07:18:30] 2026-03-05 06:17:44,970 | INFO     | mean x: 1772688565.0
[2026-03-05 07:18:30] 2026-03-05 06:17:44,970 | INFO     | mean y: 2355780.901098901
[2026-03-05 07:18:30] 2026-03-05 06:17:44,970 | INFO     | intersect: 149625107.32694212
[2026-03-05 07:18:30] 2026-03-05 06:17:44,970 | INFO     | chi2: 0.0006449219642365566
[2026-03-05 07:18:30] 2026-03-05 06:17:44,970 | INFO     | current memory leak: -0.08 B/s (using 91 data points, chi2=0.00)
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | could have reported an average CPU frequency of 3590 MHz (7 samples)
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | ..............................
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . Timing measurements:
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . get job = 0 s
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . initial setup = 4 s
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . payload setup = 4 s
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . stage-in = 0 s
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . payload execution = 5946 s
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . stage-out = 0 s
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | . log creation = 0 s
[2026-03-05 07:18:30] 2026-03-05 06:17:44,971 | INFO     | ..............................
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | 
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | job summary report
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | --------------------------------------------------
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | PanDA job id: 7036755670
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | task id: 48838577
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | errors: (none)
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | pilot state: finished 
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | transexitcode: 0
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | exeerrorcode: 0
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | exeerrordiag: 
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | exitcode: 0
[2026-03-05 07:18:30] 2026-03-05 06:17:45,028 | INFO     | exitmsg: OK
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | cpuconsumptiontime: 22727 s
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | nevents: 400
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | neventsw: 0
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | pid: 2653970
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | pgrp: 2653970
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | corecount: 4
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | event service: False
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | sizes: {0: 2295827, 11: 2295827, 5955: 2322559, 5956: 2331581, 5957: 2331637, 5959: 2331831}
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | --------------------------------------------------
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | 
[2026-03-05 07:18:30] 2026-03-05 06:17:45,029 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot164/slots/0
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | job 7036755670 has completed (purged errors)
[2026-03-05 07:18:30] 2026-03-05 06:17:45,050 | INFO     | overall cleanup function is called
[2026-03-05 07:18:30] 2026-03-05 06:17:46,057 | INFO     | --- collectZombieJob: --- 10, [2653970]
[2026-03-05 07:18:30] 2026-03-05 06:17:46,057 | INFO     | zombie collector waiting for pid 2653970
[2026-03-05 07:18:30] 2026-03-05 06:17:46,057 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-05 07:18:30] 2026-03-05 06:17:46,057 | INFO     | collected zombie processes
[2026-03-05 07:18:30] 2026-03-05 06:17:46,057 | INFO     | will attempt to kill all subprocesses of pid=2653970
[2026-03-05 07:18:30] 2026-03-05 06:17:47,100 | WARNING  | process 2653970 can no longer be monitored (due to stat problems) - aborting
[2026-03-05 07:18:30] 2026-03-05 06:17:47,493 | INFO     | process IDs to be killed: [2653970] (in reverse order)
[2026-03-05 07:18:30] 2026-03-05 06:17:47,654 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-05 07:18:30] 2026-03-05 06:17:47,744 | WARNING  | found no corresponding commands to process id(s)
[2026-03-05 07:18:30] 2026-03-05 06:17:47,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-05 07:18:30] 2026-03-05 06:17:47,820 | INFO     | did not find any defunct processes belonging to 2653970
[2026-03-05 07:18:30] 2026-03-05 06:17:47,898 | INFO     | did not find any defunct processes belonging to 2653970
[2026-03-05 07:18:30] 2026-03-05 06:17:47,899 | INFO     | ready for new job
[2026-03-05 07:18:30] 2026-03-05 06:17:47,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-05 07:18:30] 2026-03-05 06:17:47,900 | INFO     | **************************************
[2026-03-05 07:18:30] 2026-03-05 06:17:47,900 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-05 07:18:30] 2026-03-05 06:17:47,900 | INFO     | **************************************
[2026-03-05 07:18:30] 2026-03-05 06:17:47,900 | INFO     | 
[2026-03-05 07:18:30] 2026-03-05 06:17:47,910 | INFO     | architecture information:
[2026-03-05 07:18:30] 2026-03-05 06:17:47,910 | INFO     | executing command: cat /etc/os-release
[2026-03-05 07:18:30] 2026-03-05 06:17:47,925 | INFO     | cat /etc/os-release:
[2026-03-05 07:18:30] NAME="CentOS Linux"
[2026-03-05 07:18:30] VERSION="7 (Core)"
[2026-03-05 07:18:30] ID="centos"
[2026-03-05 07:18:30] ID_LIKE="rhel fedora"
[2026-03-05 07:18:30] VERSION_ID="7"
[2026-03-05 07:18:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-05 07:18:30] ANSI_COLOR="0;31"
[2026-03-05 07:18:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-05 07:18:30] HOME_URL="https://www.centos.org/"
[2026-03-05 07:18:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-05 07:18:30] 
[2026-03-05 07:18:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-05 07:18:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-05 07:18:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-05 07:18:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-05 07:18:30] 
[2026-03-05 07:18:30] 2026-03-05 06:17:47,926 | INFO     | **************************************
[2026-03-05 07:18:30] 2026-03-05 06:17:48,235 | INFO     | number of running child processes to parent process 2653970: 1
[2026-03-05 07:18:30] 2026-03-05 06:17:48,235 | INFO     | maximum number of monitored processes: 6
[2026-03-05 07:18:30] 2026-03-05 06:17:48,235 | INFO     | aborting job monitoring since job object (job id=7036755670) has expired
[2026-03-05 07:18:30] 2026-03-05 06:17:48,428 | INFO     | executing command: df -mP /var/lib/boinc/var/slot164/slots/0
[2026-03-05 07:18:30] 2026-03-05 06:17:48,443 | INFO     | sufficient remaining disk space (20575158272 B)
[2026-03-05 07:18:30] 2026-03-05 06:17:48,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-05 07:18:30] 2026-03-05 06:17:48,443 | INFO     | current server update state: UPDATING_FINAL
[2026-03-05 07:18:30] 2026-03-05 06:17:48,443 | INFO     | update_server=False
[2026-03-05 07:18:30] 2026-03-05 06:17:48,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-05 07:18:30] 2026-03-05 06:17:48,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-05 07:18:30] 2026-03-05 06:17:48,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:18:30] 2026-03-05 06:17:48,444 | INFO     | will abort loop
[2026-03-05 07:18:30] 2026-03-05 06:17:48,867 | INFO     | all payload control threads have been joined
[2026-03-05 07:18:30] 2026-03-05 06:17:48,970 | INFO     | all data control threads have been joined
[2026-03-05 07:18:30] 2026-03-05 06:17:49,149 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-05 07:18:30] 2026-03-05 06:17:49,169 | INFO     | all job control threads have been joined
[2026-03-05 07:18:30] 2026-03-05 06:17:49,448 | INFO     | [job] retrieve thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,448 | INFO     | [job] job monitor thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,660 | INFO     | [job] validate thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,680 | INFO     | [payload] execute_payloads thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,814 | INFO     | [payload] validate_pre thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,814 | INFO     | [job] create_data_payload thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,872 | INFO     | [payload] control thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,975 | INFO     | [data] control thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:49,994 | INFO     | [data] copytool_in thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:50,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-05 07:18:30] 2026-03-05 06:17:50,123 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:50,174 | INFO     | [job] control thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:50,265 | INFO     | [payload] validate_post thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:50,448 | INFO     | [data] copytool_out thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:50,869 | INFO     | [payload] failed_post thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:51,041 | INFO     | [job] queue monitor thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:17:53,155 | INFO     | [data] queue_monitor thread has finished
[2026-03-05 07:18:30] 2026-03-05 06:18:16,872 | INFO     | PID=2647922 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-05 07:18:30] 2026-03-05 06:18:16,873 | INFO     | .. there are 48 such processes running
[2026-03-05 07:18:30] 2026-03-05 06:18:16,873 | INFO     | found 0 job(s) in 20 queues
[2026-03-05 07:18:30] 2026-03-05 06:18:16,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-05 07:18:30] 2026-03-05 06:18:16,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-05 07:18:30] 2026-03-05 06:18:24,415 | INFO     | [monitor] cgroup control has ended
[2026-03-05 07:18:30] 2026-03-05 06:18:25,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22495314151232)>', '<ExcThread(monitor, started 22495074985728)>']
[2026-03-05 07:18:30] 2026-03-05 06:18:25,920 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-05 07:18:30] 2026-03-05 06:18:25,920 | INFO     | [monitor] control thread has ended
[2026-03-05 07:18:30] 2026-03-05 06:18:30,061 | INFO     | all workflow threads have been joined
[2026-03-05 07:18:30] 2026-03-05 06:18:30,061 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-05 07:18:30] 2026-03-05 06:18:30,061 | INFO     | traces error code: 0
[2026-03-05 07:18:30] 2026-03-05 06:18:30,061 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-05 07:18:30] 2026-03-05 06:18:30,187 [wrapper] ==== pilot stdout END ====
[2026-03-05 07:18:30] 2026-03-05 06:18:30,190 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-05 07:18:30] 2026-03-05 06:18:30,192 [wrapper] pilotpid: 2647922
[2026-03-05 07:18:30] 2026-03-05 06:18:30,195 [wrapper] Pilot exit status: 0
[2026-03-05 07:18:30] 2026-03-05 06:18:30,205 [wrapper] pandaids: 7036755670
[2026-03-05 07:18:30] 2026-03-05 06:18:30,337 [wrapper] cleanup supervisor_pilot 3377870 2647923
[2026-03-05 07:18:30] 2026-03-05 06:18:30,340 [wrapper] Test setup, not cleaning
[2026-03-05 07:18:30] 2026-03-05 06:18:30,343 [wrapper] apfmon messages muted
[2026-03-05 07:18:30] 2026-03-05 06:18:30,345 [wrapper] ==== wrapper stdout END ====
[2026-03-05 07:18:30] 2026-03-05 06:18:30,347 [wrapper] ==== wrapper stderr END ====
[2026-03-05 07:18:30]  *** Error codes and diagnostics ***
[2026-03-05 07:18:30]     "exeErrorCode": 0,
[2026-03-05 07:18:30]     "exeErrorDiag": "",
[2026-03-05 07:18:30]     "pilotErrorCode": 0,
[2026-03-05 07:18:30]     "pilotErrorDiag": "",
[2026-03-05 07:18:30]  *** Listing of results directory ***
[2026-03-05 07:18:30] total 514860
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc    584627 Mar  3 23:22 pilot3.tar.gz
[2026-03-05 07:18:30] -rwx------. 1 boinc boinc     36322 Mar  3 23:22 runpilot2-wrapper.sh
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc      5111 Mar  3 23:22 queuedata.json
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc       100 Mar  5 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-05 07:18:30] -rwxr-xr-x. 1 boinc boinc      7986 Mar  5 05:38 run_atlas
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc       105 Mar  5 05:38 job.xml
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc      6708 Mar  5 05:38 init_data.xml
[2026-03-05 07:18:30] -rw-r--r--. 2 boinc boinc 291576614 Mar  5 05:38 EVNT.48220197._000253.pool.root.1
[2026-03-05 07:18:30] -rw-r--r--. 2 boinc boinc     15845 Mar  5 05:38 start_atlas.sh
[2026-03-05 07:18:30] drwxrwx--x. 2 boinc boinc      4096 Mar  5 05:38 shared
[2026-03-05 07:18:30] -rw-r--r--. 2 boinc boinc    597964 Mar  5 05:38 input.tar.gz
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc         0 Mar  5 05:38 boinc_lockfile
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc      2567 Mar  5 05:38 pandaJob.out
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc    997749 Mar  5 05:38 agis_schedconf.cvmfs.json
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc   1521291 Mar  5 05:38 agis_ddmendpoints.agis.ALL.json
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc       445 Mar  5 05:38 workernode_map.json
[2026-03-05 07:18:30] drwx------. 5 boinc boinc      4096 Mar  5 05:38 pilot3
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc 229405772 Mar  5 07:17 HITS.48838577._006379.pool.root.1
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc       529 Mar  5 07:17 boinc_task_state.xml
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc      1031 Mar  5 07:17 memory_monitor_summary.json
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc    283931 Mar  5 07:17 log.48838577._006379.job.log.tgz.1
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc      6352 Mar  5 07:17 heartbeat.json
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc      8192 Mar  5 07:18 boinc_mmap_file
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc        27 Mar  5 07:18 wrapper_checkpoint.txt
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc        95 Mar  5 07:18 pilot_heartbeat.json
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc      5120 Mar  5 07:18 pilotlog.txt
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc    863033 Mar  5 07:18 log.48838577._006379.job.log.1
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc       357 Mar  5 07:18 output.list
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc       620 Mar  5 07:18 runtime_log
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc   1167360 Mar  5 07:18 result.tar.gz
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc       663 Mar  5 07:18 xM1KDmbJnH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmj6HLDmBOdGsn.diag
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc      9221 Mar  5 07:18 runtime_log.err
[2026-03-05 07:18:30] -rw-r--r--. 1 boinc boinc     21347 Mar  5 07:18 stderr.txt
[2026-03-05 07:18:30] HITS file was successfully produced:
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc 229405772 Mar  5 07:17 shared/HITS.pool.root.1
[2026-03-05 07:18:30]  *** Contents of shared directory: ***
[2026-03-05 07:18:30] total 510524
[2026-03-05 07:18:30] -rw-r--r--. 2 boinc boinc 291576614 Mar  5 05:38 ATLAS.root_0
[2026-03-05 07:18:30] -rw-r--r--. 2 boinc boinc     15845 Mar  5 05:38 start_atlas.sh
[2026-03-05 07:18:30] -rw-r--r--. 2 boinc boinc    597964 Mar  5 05:38 input.tar.gz
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc 229405772 Mar  5 07:17 HITS.pool.root.1
[2026-03-05 07:18:30] -rw-------. 1 boinc boinc   1167360 Mar  5 07:18 result.tar.gz
07:18:31 (2643289): run_atlas exited; CPU time 22992.908193
07:18:31 (2643289): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN