Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:10:46 (1401805): wrapper (7.7.26015): starting
16:10:46 (1401805): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 16:10:46] Arguments: --nthreads 12
[2026-03-03 16:10:46] Threads: 12
[2026-03-03 16:10:46] Checking for CVMFS
[2026-03-03 16:10:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 16:10:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 16:10:46] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 16:10:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 16:10:47] 2.11.5.0 4020242 133570 250880 156862 0 843 28681817 45568000 20114 130560 0 1204371521 99.814 677544681 21107 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-03 16:10:47] CVMFS is ok
[2026-03-03 16:10:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 16:10:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 16:10:47] Further information can be found at the LHC@home message board.
[2026-03-03 16:10:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 16:10:47] Checking for apptainer binary...
[2026-03-03 16:10:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 16:10:47] Running /usr/bin/apptainer --version
[2026-03-03 16:10:47] apptainer version 1.4.1-1.el9
[2026-03-03 16:10:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 16:10:47] wns0028.triumf.lcg
[2026-03-03 16:10:47] apptainer works
[2026-03-03 16:10:47] Set ATHENA_PROC_NUMBER=12
[2026-03-03 16:10:47] Set ATHENA_CORE_NUMBER=12
[2026-03-03 16:10:47] Starting ATLAS job with PandaID=7036755197
[2026-03-03 16:10:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 16:15:22]  *** The last 200 lines of the pilot log: ***
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | will not add max space = 0 B to job metrics
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | WARNING  | wrong length of table data, x=[1772583108.0], y=[1442.0] (must be same and length>=4)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | could have reported an average CPU frequency of 2542 MHz (4 samples)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | ..............................
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . Timing measurements:
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . get job = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . initial setup = 16 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . payload setup = 11 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . stage-in = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . payload execution = 37 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . stage-out = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | . log creation = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | ..............................
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036755197/pilotlog.txt
[2026-03-03 16:15:22] 2026-03-04 00:14:19,068 | INFO     | monitor loop #58: job 0:7036755197 is in state 'failed'
[2026-03-03 16:15:22] 2026-03-04 00:14:19,069 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,085 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-03 16:15:22] - Log from pilotlog.txt -
[2026-03-03 16:15:22] 2026-03-04 00:14:19,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 16:15:22] 2026-03-04 00:14:19,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 16:15:22] 2026-03-04 00:14:19,058 | WARNING  | found no stored workdir sizes
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | will not add max space = 0 B to job metrics
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | WARNING  | wrong length of table data, x=[1772583108.0], y=[1442.0] (must be same and length>=4)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | could have reported an average CPU frequency of 2542 MHz (4 samples)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | ..............................
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . Timing measurements:
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . get job = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . initial setup = 16 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . payload setup = 11 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . stage-in = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . payload execution = 37 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . stage-out = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | . log creation = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | ..............................
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036755197/pilotlog.txt
[2026-03-03 16:15:22] 2026-03-04 00:14:19,068 | INFO     | monitor loop #58: job 0:7036755197 is in state 'failed'
[2026-03-03 16:15:22] 2026-03-04 00:14:19,069 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,085 | WARNING  | 
[2026-03-03 16:15:22] [begin log extracts]
[2026-03-03 16:15:22] - Log from pilotlog.txt -
[2026-03-03 16:15:22] 2026-03-04 00:14:19,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 16:15:22] 2026-03-04 00:14:19,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 16:15:22] 2026-03-04 00:14:19,058 | WARNING  | found no stored workdir sizes
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | will not add max space = 0 B to job metrics
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | WARNING  | wrong length of table data, x=[1772583108.0], y=[1442.0] (must be same and length>=4)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | could have reported an average CPU frequency of 2542 MHz (4 samples)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | ..............................
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . Timing measurements:
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . get job = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . initial setup = 16 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . payload setup = 11 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . stage-in = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . payload execution = 37 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,059 | INFO     | . stage-out = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | . log creation = 0 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | ..............................
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 16:15:22] 2026-03-04 00:14:19,060 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036755197/pilotlog.txt
[2026-03-03 16:15:22] 2026-03-04 00:14:19,068 | INFO     | monitor loop #58: job 0:7036755197 is in state 'failed'
[2026-03-03 16:15:22] 2026-03-04 00:14:19,069 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-03 16:15:22] [end log extracts]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,085 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,086 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-03 16:15:22] 2026-03-04 00:14:19,141 | INFO     | 
[2026-03-03 16:15:22] 2026-03-04 00:14:19,141 | INFO     | job summary report
[2026-03-03 16:15:22] 2026-03-04 00:14:19,141 | INFO     | --------------------------------------------------
[2026-03-03 16:15:22] 2026-03-04 00:14:19,141 | INFO     | PanDA job id: 7036755197
[2026-03-03 16:15:22] 2026-03-04 00:14:19,141 | INFO     | task id: 48838577
[2026-03-03 16:15:22] 2026-03-04 00:14:19,141 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-03 16:12:11,689 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-03 16:15:22] 2026-03-04 00:14:19,141 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | pilot state: failed 
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | transexitcode: 65
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | exeerrorcode: 65
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | exitcode: 65
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | cpuconsumptiontime: 14 s
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | nevents: 0
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | neventsw: 0
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | pid: 1410020
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | pgrp: 1410020
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | corecount: 12
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | event service: False
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | sizes: {0: 2287075, 11: 2287075, 53: 2314720, 54: 2314720, 172: 2314886}
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | --------------------------------------------------
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | 
[2026-03-03 16:15:22] 2026-03-04 00:14:19,142 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | job 7036755197 has completed (purged errors)
[2026-03-03 16:15:22] 2026-03-04 00:14:19,160 | INFO     | overall cleanup function is called
[2026-03-03 16:15:22] 2026-03-04 00:14:20,179 | INFO     | --- collectZombieJob: --- 10, [1410020]
[2026-03-03 16:15:22] 2026-03-04 00:14:20,179 | INFO     | zombie collector waiting for pid 1410020
[2026-03-03 16:15:22] 2026-03-04 00:14:20,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 16:15:22] 2026-03-04 00:14:20,179 | INFO     | collected zombie processes
[2026-03-03 16:15:22] 2026-03-04 00:14:20,179 | INFO     | will attempt to kill all subprocesses of pid=1410020
[2026-03-03 16:15:22] 2026-03-04 00:14:20,867 | INFO     | process IDs to be killed: [1410020] (in reverse order)
[2026-03-03 16:15:22] 2026-03-04 00:14:20,935 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 16:15:22] 2026-03-04 00:14:20,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 16:15:22] 2026-03-04 00:14:20,949 | INFO     | did not find any defunct processes belonging to 1410020
[2026-03-03 16:15:22] 2026-03-04 00:14:20,962 | INFO     | did not find any defunct processes belonging to 1410020
[2026-03-03 16:15:22] 2026-03-04 00:14:20,963 | INFO     | ready for new job
[2026-03-03 16:15:22] 2026-03-04 00:14:20,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 16:15:22] 2026-03-04 00:14:20,965 | INFO     | **************************************
[2026-03-03 16:15:22] 2026-03-04 00:14:20,968 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 16:15:22] 2026-03-04 00:14:20,968 | INFO     | **************************************
[2026-03-03 16:15:22] 2026-03-04 00:14:20,969 | INFO     | 
[2026-03-03 16:15:22] 2026-03-04 00:14:20,970 | INFO     | architecture information:
[2026-03-03 16:15:22] 2026-03-04 00:14:20,975 | INFO     | executing command: cat /etc/os-release
[2026-03-03 16:15:22] 2026-03-04 00:14:21,019 | INFO     | cat /etc/os-release:
[2026-03-03 16:15:22] NAME="CentOS Linux"
[2026-03-03 16:15:22] VERSION="7 (Core)"
[2026-03-03 16:15:22] ID="centos"
[2026-03-03 16:15:22] ID_LIKE="rhel fedora"
[2026-03-03 16:15:22] VERSION_ID="7"
[2026-03-03 16:15:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 16:15:22] ANSI_COLOR="0;31"
[2026-03-03 16:15:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 16:15:22] HOME_URL="https://www.centos.org/"
[2026-03-03 16:15:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 16:15:22] 
[2026-03-03 16:15:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 16:15:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 16:15:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 16:15:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 16:15:22] 
[2026-03-03 16:15:22] 2026-03-04 00:14:21,019 | INFO     | **************************************
[2026-03-03 16:15:22] 2026-03-04 00:14:21,523 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-03 16:15:22] 2026-03-04 00:14:21,584 | INFO     | sufficient remaining disk space (1967340388352 B)
[2026-03-03 16:15:22] 2026-03-04 00:14:21,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 16:15:22] 2026-03-04 00:14:21,584 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 16:15:22] 2026-03-04 00:14:21,584 | INFO     | update_server=False
[2026-03-03 16:15:22] 2026-03-04 00:14:21,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 16:15:22] 2026-03-04 00:14:21,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 16:15:22] 2026-03-04 00:14:21,836 | INFO     | all data control threads have been joined
[2026-03-03 16:15:22] 2026-03-04 00:14:22,162 | INFO     | all job control threads have been joined
[2026-03-03 16:15:22] 2026-03-04 00:14:22,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 16:15:22] 2026-03-04 00:14:22,581 | INFO     | aborting loop
[2026-03-03 16:15:22] 2026-03-04 00:14:22,595 | INFO     | [job] retrieve thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:22,706 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:22,708 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:22,736 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:22,801 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:22,842 | INFO     | [data] control thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:22,874 | INFO     | all payload control threads have been joined
[2026-03-03 16:15:22] 2026-03-04 00:14:22,884 | INFO     | [data] copytool_in thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:23,168 | INFO     | [job] control thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:23,172 | INFO     | [payload] validate_post thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:23,274 | INFO     | [payload] failed_post thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:23,587 | INFO     | [job] job monitor thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:23,595 | INFO     | [data] copytool_out thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:23,881 | INFO     | [payload] control thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:23,948 | INFO     | [job] validate thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:24,156 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 16:15:22] 2026-03-04 00:14:24,236 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 16:15:22] 2026-03-04 00:14:25,162 | INFO     | [job] queue monitor thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:28,245 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 16:15:22] 2026-03-04 00:14:51,816 | INFO     | PID=1405479 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 16:15:22] 2026-03-04 00:14:51,816 | INFO     | .. there are 28 such processes running
[2026-03-03 16:15:22] 2026-03-04 00:14:51,817 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 16:15:22] 2026-03-04 00:14:51,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 16:15:22] 2026-03-04 00:14:51,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 16:15:22] 2026-03-04 00:15:15,294 | INFO     | [monitor] cgroup control has ended
[2026-03-03 16:15:22] 2026-03-04 00:15:16,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139793354348352)>', '<ExcThread(monitor, started 139792947844864)>']
[2026-03-03 16:15:22] 2026-03-04 00:15:16,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 16:15:22] 2026-03-04 00:15:16,978 | INFO     | [monitor] control thread has ended
[2026-03-03 16:15:22] 2026-03-04 00:15:21,463 | INFO     | all workflow threads have been joined
[2026-03-03 16:15:22] 2026-03-04 00:15:21,463 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 16:15:22] 2026-03-04 00:15:21,463 | INFO     | traces error code: 0
[2026-03-03 16:15:22] 2026-03-04 00:15:21,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 16:15:22] 2026-03-04 00:15:21,650 [wrapper] ==== pilot stdout END ====
[2026-03-03 16:15:22] 2026-03-04 00:15:21,653 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 16:15:22] 2026-03-04 00:15:21,654 [wrapper] pilotpid: 1405479
[2026-03-03 16:15:22] 2026-03-04 00:15:21,658 [wrapper] Pilot exit status: 0
[2026-03-03 16:15:22] 2026-03-04 00:15:21,669 [wrapper] pandaids: 7036755197
[2026-03-03 16:15:22] 2026-03-04 00:15:21,766 [wrapper] cleanup supervisor_pilot 1405485 1405480
[2026-03-03 16:15:22] 2026-03-04 00:15:21,820 [wrapper] Test setup, not cleaning
[2026-03-03 16:15:22] 2026-03-04 00:15:21,862 [wrapper] apfmon messages muted
[2026-03-03 16:15:22] 2026-03-04 00:15:21,916 [wrapper] ==== wrapper stdout END ====
[2026-03-03 16:15:22] 2026-03-04 00:15:21,961 [wrapper] ==== wrapper stderr END ====
[2026-03-03 16:15:22]  *** Error codes and diagnostics ***
[2026-03-03 16:15:22]     "exeErrorCode": 65,
[2026-03-03 16:15:22]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 16:15:22]     "pilotErrorCode": 1305,
[2026-03-03 16:15:22]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 16:15:22]  *** Listing of results directory ***
[2026-03-03 16:15:22] total 286896
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc    584627 Mar  3 14:22 pilot3.tar.gz
[2026-03-03 16:15:22] -rwx------. 1 boinc boinc     36322 Mar  3 14:22 runpilot2-wrapper.sh
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc      5111 Mar  3 14:22 queuedata.json
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc       100 Mar  3 16:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 16:15:22] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 16:10 run_atlas
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc       105 Mar  3 16:10 job.xml
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc      6593 Mar  3 16:10 init_data.xml
[2026-03-03 16:15:22] -rw-r--r--. 2 boinc boinc 289640998 Mar  3 16:10 EVNT.48220197._000247.pool.root.1
[2026-03-03 16:15:22] -rw-r--r--. 2 boinc boinc     15845 Mar  3 16:10 start_atlas.sh
[2026-03-03 16:15:22] drwxrwx--x. 2 boinc boinc      4096 Mar  3 16:10 shared
[2026-03-03 16:15:22] -rw-r--r--. 2 boinc boinc    597973 Mar  3 16:10 input.tar.gz
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc         0 Mar  3 16:10 boinc_lockfile
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc      2567 Mar  3 16:10 pandaJob.out
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc    998484 Mar  3 16:10 agis_schedconf.cvmfs.json
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc   1516092 Mar  3 16:11 agis_ddmendpoints.agis.ALL.json
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc       445 Mar  3 16:11 workernode_map.json
[2026-03-03 16:15:22] drwx------. 5 boinc boinc      4096 Mar  3 16:11 pilot3
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc       523 Mar  3 16:12 boinc_task_state.xml
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc       983 Mar  3 16:12 memory_monitor_summary.json
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc     21519 Mar  3 16:12 log.48838577._006224.job.log.tgz.1
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc        95 Mar  3 16:14 pilot_heartbeat.json
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc      7038 Mar  3 16:14 heartbeat.json
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc        22 Mar  3 16:15 wrapper_checkpoint.txt
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc      8192 Mar  3 16:15 boinc_mmap_file
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc      4819 Mar  3 16:15 pilotlog.txt
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc     83778 Mar  3 16:15 log.48838577._006224.job.log.1
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc       188 Mar  3 16:15 output.list
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc       620 Mar  3 16:15 runtime_log
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc    122880 Mar  3 16:15 result.tar.gz
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc       645 Mar  3 16:15 XG6NDmZJnH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmj5FLDm9RwDXn.diag
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc      8635 Mar  3 16:15 runtime_log.err
[2026-03-03 16:15:22] -rw-r--r--. 1 boinc boinc     21768 Mar  3 16:15 stderr.txt
[2026-03-03 16:15:22] No HITS result produced
[2026-03-03 16:15:22]  *** Contents of shared directory: ***
[2026-03-03 16:15:22] total 283580
[2026-03-03 16:15:22] -rw-r--r--. 2 boinc boinc 289640998 Mar  3 16:10 ATLAS.root_0
[2026-03-03 16:15:22] -rw-r--r--. 2 boinc boinc     15845 Mar  3 16:10 start_atlas.sh
[2026-03-03 16:15:22] -rw-r--r--. 2 boinc boinc    597973 Mar  3 16:10 input.tar.gz
[2026-03-03 16:15:22] -rw-------. 1 boinc boinc    122880 Mar  3 16:15 result.tar.gz
16:15:24 (1401805): run_atlas exited; CPU time 19.306783
16:15:24 (1401805): called boinc_finish(0)

</stderr_txt>
]]>

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