Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:15:17 (691671): wrapper (7.7.26015): starting
14:15:17 (691671): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 14:15:17] Arguments: --nthreads 12
[2026-03-03 14:15:17] Threads: 12
[2026-03-03 14:15:17] Checking for CVMFS
[2026-03-03 14:15:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 14:15:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 14:15:18] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 14:15:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 14:15:18] 2.11.5.0 3295111 133474 328372 156857 2 409 40491684 45568001 22178 130560 0 1223754878 99.820 651001065 19998 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-03 14:15:18] CVMFS is ok
[2026-03-03 14:15:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 14:15:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 14:15:18] Further information can be found at the LHC@home message board.
[2026-03-03 14:15:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 14:15:18] Checking for apptainer binary...
[2026-03-03 14:15:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 14:15:18] Running /usr/bin/apptainer --version
[2026-03-03 14:15:18] apptainer version 1.4.1-1.el9
[2026-03-03 14:15:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 14:15:19] wns0096.triumf.lcg
[2026-03-03 14:15:19] apptainer works
[2026-03-03 14:15:19] Set ATHENA_PROC_NUMBER=12
[2026-03-03 14:15:19] Set ATHENA_CORE_NUMBER=12
[2026-03-03 14:15:19] Starting ATLAS job with PandaID=7036593548
[2026-03-03 14:15:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 14:20:03]  *** The last 200 lines of the pilot log: ***
[2026-03-03 14:20:04] 2026-03-03 22:19:03,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 14:20:04] 2026-03-03 22:19:03,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | WARNING  | wrong length of table data, x=[1772576192.0], y=[29828.0] (must be same and length>=4)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | could have reported an average CPU frequency of 2656 MHz (4 samples)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | ..............................
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . Timing measurements:
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . get job = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . initial setup = 15 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . payload setup = 14 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . stage-in = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . payload execution = 46 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . stage-out = 1 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | . log creation = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | ..............................
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036593548/pilotlog.txt
[2026-03-03 14:20:04] 2026-03-03 22:19:03,415 | INFO     | time since job start (188s) is within the limit (349056.0s)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,468 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-03 14:20:04] - Log from pilotlog.txt -
[2026-03-03 14:20:04] 2026-03-03 22:19:03,313 | INFO     | extracted standard info from prmon json
[2026-03-03 14:20:04] 2026-03-03 22:19:03,313 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 14:20:04] 2026-03-03 22:19:03,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 14:20:04] 2026-03-03 22:19:03,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 14:20:04] 2026-03-03 22:19:03,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | WARNING  | wrong length of table data, x=[1772576192.0], y=[29828.0] (must be same and length>=4)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | could have reported an average CPU frequency of 2656 MHz (4 samples)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | ..............................
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . Timing measurements:
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . get job = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . initial setup = 15 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . payload setup = 14 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . stage-in = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . payload execution = 46 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . stage-out = 1 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | . log creation = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | ..............................
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036593548/pilotlog.txt
[2026-03-03 14:20:04] 2026-03-03 22:19:03,415 | INFO     | time since job start (188s) is within the limit (349056.0s)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,468 | WARNING  | 
[2026-03-03 14:20:04] [begin log extracts]
[2026-03-03 14:20:04] - Log from pilotlog.txt -
[2026-03-03 14:20:04] 2026-03-03 22:19:03,313 | INFO     | extracted standard info from prmon json
[2026-03-03 14:20:04] 2026-03-03 22:19:03,313 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 14:20:04] 2026-03-03 22:19:03,329 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 14:20:04] 2026-03-03 22:19:03,358 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 14:20:04] 2026-03-03 22:19:03,358 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | WARNING  | wrong length of table data, x=[1772576192.0], y=[29828.0] (must be same and length>=4)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | could have reported an average CPU frequency of 2656 MHz (4 samples)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | ..............................
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . Timing measurements:
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . get job = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . initial setup = 15 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . payload setup = 14 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . stage-in = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . payload execution = 46 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,359 | INFO     | . stage-out = 1 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | . log creation = 0 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | ..............................
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 14:20:04] 2026-03-03 22:19:03,360 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036593548/pilotlog.txt
[2026-03-03 14:20:04] 2026-03-03 22:19:03,415 | INFO     | time since job start (188s) is within the limit (349056.0s)
[2026-03-03 14:20:04] [end log extracts]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,468 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,479 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | 
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | job summary report
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | --------------------------------------------------
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | PanDA job id: 7036593548
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | task id: 48700890
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-03 14:16:54,493 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | pilot state: failed 
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | transexitcode: 65
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | exeerrorcode: 65
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | exitcode: 65
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | cpuconsumptiontime: 13 s
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | nevents: 0
[2026-03-03 14:20:04] 2026-03-03 22:19:03,690 | INFO     | neventsw: 0
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | pid: 699962
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | pgrp: 699962
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | corecount: 12
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | event service: False
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | sizes: {0: 2286517, 1: 2286978, 65: 2310146, 66: 2310122, 68: 2314470, 187: 2314668}
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | --------------------------------------------------
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | 
[2026-03-03 14:20:04] 2026-03-03 22:19:03,691 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-03 14:20:04] 2026-03-03 22:19:03,923 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,923 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,923 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,923 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 14:20:04] 2026-03-03 22:19:03,924 | INFO     | job 7036593548 has completed (purged errors)
[2026-03-03 14:20:04] 2026-03-03 22:19:03,925 | INFO     | overall cleanup function is called
[2026-03-03 14:20:04] 2026-03-03 22:19:04,937 | INFO     | --- collectZombieJob: --- 10, [699962]
[2026-03-03 14:20:04] 2026-03-03 22:19:04,937 | INFO     | zombie collector waiting for pid 699962
[2026-03-03 14:20:04] 2026-03-03 22:19:04,937 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 14:20:04] 2026-03-03 22:19:04,937 | INFO     | collected zombie processes
[2026-03-03 14:20:04] 2026-03-03 22:19:04,937 | INFO     | will attempt to kill all subprocesses of pid=699962
[2026-03-03 14:20:04] 2026-03-03 22:19:05,156 | INFO     | process IDs to be killed: [699962] (in reverse order)
[2026-03-03 14:20:04] 2026-03-03 22:19:05,304 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 14:20:04] 2026-03-03 22:19:05,305 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 14:20:04] 2026-03-03 22:19:05,313 | INFO     | did not find any defunct processes belonging to 699962
[2026-03-03 14:20:04] 2026-03-03 22:19:05,337 | INFO     | did not find any defunct processes belonging to 699962
[2026-03-03 14:20:04] 2026-03-03 22:19:05,337 | INFO     | ready for new job
[2026-03-03 14:20:04] 2026-03-03 22:19:05,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 14:20:04] 2026-03-03 22:19:05,339 | INFO     | **************************************
[2026-03-03 14:20:04] 2026-03-03 22:19:05,339 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 14:20:04] 2026-03-03 22:19:05,339 | INFO     | **************************************
[2026-03-03 14:20:04] 2026-03-03 22:19:05,339 | INFO     | 
[2026-03-03 14:20:04] 2026-03-03 22:19:05,341 | INFO     | architecture information:
[2026-03-03 14:20:04] 2026-03-03 22:19:05,345 | INFO     | executing command: cat /etc/os-release
[2026-03-03 14:20:04] 2026-03-03 22:19:05,414 | INFO     | cat /etc/os-release:
[2026-03-03 14:20:04] NAME="CentOS Linux"
[2026-03-03 14:20:04] VERSION="7 (Core)"
[2026-03-03 14:20:04] ID="centos"
[2026-03-03 14:20:04] ID_LIKE="rhel fedora"
[2026-03-03 14:20:04] VERSION_ID="7"
[2026-03-03 14:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 14:20:04] ANSI_COLOR="0;31"
[2026-03-03 14:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 14:20:04] HOME_URL="https://www.centos.org/"
[2026-03-03 14:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 14:20:04] 
[2026-03-03 14:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 14:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 14:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 14:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 14:20:04] 
[2026-03-03 14:20:04] 2026-03-03 22:19:05,414 | INFO     | **************************************
[2026-03-03 14:20:04] 2026-03-03 22:19:05,918 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-03 14:20:04] 2026-03-03 22:19:05,938 | INFO     | sufficient remaining disk space (2071860346880 B)
[2026-03-03 14:20:04] 2026-03-03 22:19:05,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 14:20:04] 2026-03-03 22:19:05,939 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 14:20:04] 2026-03-03 22:19:05,939 | INFO     | update_server=False
[2026-03-03 14:20:04] 2026-03-03 22:19:05,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 14:20:04] 2026-03-03 22:19:05,944 | INFO     | all job control threads have been joined
[2026-03-03 14:20:04] 2026-03-03 22:19:05,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:20:04] 2026-03-03 22:19:05,945 | INFO     | aborting loop
[2026-03-03 14:20:04] 2026-03-03 22:19:06,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 14:20:04] 2026-03-03 22:19:06,358 | INFO     | all payload control threads have been joined
[2026-03-03 14:20:04] 2026-03-03 22:19:06,487 | INFO     | all data control threads have been joined
[2026-03-03 14:20:04] 2026-03-03 22:19:06,945 | INFO     | [job] retrieve thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:06,951 | INFO     | [job] job monitor thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:06,957 | INFO     | [job] control thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:07,055 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:07,364 | INFO     | [payload] control thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:07,442 | INFO     | [payload] validate_post thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:07,493 | INFO     | [data] control thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:07,845 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:07,980 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:08,136 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:08,194 | INFO     | [data] copytool_in thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:08,233 | INFO     | [data] copytool_out thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:08,263 | INFO     | [job] validate thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:08,380 | INFO     | [payload] failed_post thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:08,672 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 14:20:04] 2026-03-03 22:19:08,704 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 14:20:04] 2026-03-03 22:19:09,712 | INFO     | [job] queue monitor thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:12,683 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 14:20:04] 2026-03-03 22:19:36,837 | INFO     | PID=695397 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 14:20:04] 2026-03-03 22:19:36,838 | INFO     | .. there are 35 such processes running
[2026-03-03 14:20:04] 2026-03-03 22:19:36,838 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 14:20:04] 2026-03-03 22:19:36,838 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 14:20:04] 2026-03-03 22:19:36,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 14:20:04] 2026-03-03 22:19:55,247 | INFO     | [monitor] cgroup control has ended
[2026-03-03 14:20:04] 2026-03-03 22:19:57,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140573623981888)>', '<ExcThread(monitor, started 140573222606592)>']
[2026-03-03 14:20:04] 2026-03-03 22:19:57,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 14:20:04] 2026-03-03 22:19:57,973 | INFO     | [monitor] control thread has ended
[2026-03-03 14:20:04] 2026-03-03 22:20:02,108 | INFO     | all workflow threads have been joined
[2026-03-03 14:20:04] 2026-03-03 22:20:02,108 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 14:20:04] 2026-03-03 22:20:02,108 | INFO     | traces error code: 0
[2026-03-03 14:20:04] 2026-03-03 22:20:02,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 14:20:04] 2026-03-03 22:20:02,677 [wrapper] ==== pilot stdout END ====
[2026-03-03 14:20:04] 2026-03-03 22:20:02,682 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 14:20:04] 2026-03-03 22:20:02,683 [wrapper] pilotpid: 695397
[2026-03-03 14:20:04] 2026-03-03 22:20:02,685 [wrapper] Pilot exit status: 0
[2026-03-03 14:20:04] 2026-03-03 22:20:02,723 [wrapper] pandaids: 7036593548
[2026-03-03 14:20:04] 2026-03-03 22:20:02,984 [wrapper] cleanup supervisor_pilot  695403 695398
[2026-03-03 14:20:04] 2026-03-03 22:20:03,013 [wrapper] Test setup, not cleaning
[2026-03-03 14:20:04] 2026-03-03 22:20:03,020 [wrapper] apfmon messages muted
[2026-03-03 14:20:04] 2026-03-03 22:20:03,028 [wrapper] ==== wrapper stdout END ====
[2026-03-03 14:20:04] 2026-03-03 22:20:03,055 [wrapper] ==== wrapper stderr END ====
[2026-03-03 14:20:04]  *** Error codes and diagnostics ***
[2026-03-03 14:20:04]     "exeErrorCode": 65,
[2026-03-03 14:20:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 14:20:04]     "pilotErrorCode": 1305,
[2026-03-03 14:20:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 14:20:04]  *** Listing of results directory ***
[2026-03-03 14:20:04] total 188352
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc    584627 Mar  3 11:48 pilot3.tar.gz
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc      5111 Mar  3 12:48 queuedata.json
[2026-03-03 14:20:04] -rwx------. 1 boinc boinc     36322 Mar  3 12:49 runpilot2-wrapper.sh
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc       100 Mar  3 14:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 14:20:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 14:15 run_atlas
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc       105 Mar  3 14:15 job.xml
[2026-03-03 14:20:04] -rw-r--r--. 2 boinc boinc 188735302 Mar  3 14:15 EVNT.48700888._000107.pool.root.1
[2026-03-03 14:20:04] -rw-r--r--. 2 boinc boinc     15845 Mar  3 14:15 start_atlas.sh
[2026-03-03 14:20:04] drwxrwx--x. 2 boinc boinc      4096 Mar  3 14:15 shared
[2026-03-03 14:20:04] -rw-r--r--. 2 boinc boinc    597936 Mar  3 14:15 input.tar.gz
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc      6594 Mar  3 14:15 init_data.xml
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc         0 Mar  3 14:15 boinc_lockfile
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc      2511 Mar  3 14:15 pandaJob.out
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc    998484 Mar  3 14:15 agis_schedconf.cvmfs.json
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc   1516092 Mar  3 14:15 agis_ddmendpoints.agis.ALL.json
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc       445 Mar  3 14:15 workernode_map.json
[2026-03-03 14:20:04] drwx------. 5 boinc boinc      4096 Mar  3 14:15 pilot3
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc       522 Mar  3 14:16 boinc_task_state.xml
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc       965 Mar  3 14:16 memory_monitor_summary.json
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc     20776 Mar  3 14:17 log.48700890._002389.job.log.tgz.1
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc        95 Mar  3 14:18 pilot_heartbeat.json
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc      7013 Mar  3 14:19 heartbeat.json
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc      8192 Mar  3 14:20 boinc_mmap_file
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc        22 Mar  3 14:20 wrapper_checkpoint.txt
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc      4818 Mar  3 14:20 pilotlog.txt
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc     85047 Mar  3 14:20 log.48700890._002389.job.log.1
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc       188 Mar  3 14:20 output.list
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc       620 Mar  3 14:20 runtime_log
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc    122880 Mar  3 14:20 result.tar.gz
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc       645 Mar  3 14:20 wXPMDmFrlH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgTFLDm3bG0en.diag
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc      8635 Mar  3 14:20 runtime_log.err
[2026-03-03 14:20:04] -rw-r--r--. 1 boinc boinc     21700 Mar  3 14:20 stderr.txt
[2026-03-03 14:20:04] No HITS result produced
[2026-03-03 14:20:04]  *** Contents of shared directory: ***
[2026-03-03 14:20:04] total 185036
[2026-03-03 14:20:04] -rw-r--r--. 2 boinc boinc 188735302 Mar  3 14:15 ATLAS.root_0
[2026-03-03 14:20:04] -rw-r--r--. 2 boinc boinc     15845 Mar  3 14:15 start_atlas.sh
[2026-03-03 14:20:04] -rw-r--r--. 2 boinc boinc    597936 Mar  3 14:15 input.tar.gz
[2026-03-03 14:20:04] -rw-------. 1 boinc boinc    122880 Mar  3 14:20 result.tar.gz
14:20:05 (691671): run_atlas exited; CPU time 19.765992
14:20:05 (691671): called boinc_finish(0)

</stderr_txt>
]]>

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