Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:40:40 (8069): wrapper (7.7.26015): starting
08:40:40 (8069): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 08:40:40] Arguments: --nthreads 8
[2026-03-04 08:40:40] Threads: 8
[2026-03-04 08:40:40] Checking for CVMFS
[2026-03-04 08:40:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 08:40:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 08:40:42] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 08:40:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 08:40:43] 2.11.2.0 3310 10076 82444 156874 2 93 17191699 25165824 1088 130560 152 2118509 99.968 367685 18 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-04 08:40:43] CVMFS is ok
[2026-03-04 08:40:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 08:40:43] Checking for apptainer binary...
[2026-03-04 08:40:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 08:40:43] Running /usr/bin/apptainer --version
[2026-03-04 08:40:43] apptainer version 1.3.2-1.el7
[2026-03-04 08:40:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 08:41:02] cg-vwn451.simple-grid.lan
[2026-03-04 08:41:02] apptainer works
[2026-03-04 08:41:02] Set ATHENA_PROC_NUMBER=8
[2026-03-04 08:41:02] Set ATHENA_CORE_NUMBER=8
[2026-03-04 08:41:02] Starting ATLAS job with PandaID=7036587219
[2026-03-04 08:41:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 12:14:44]  *** The last 200 lines of the pilot log: ***
[2026-03-04 12:14:44] 2026-03-04 11:13:47,366 | INFO     | job 7036587219 has finished - writing final server update
[2026-03-04 12:14:44] 2026-03-04 11:13:47,367 | INFO     | total number of processed events: 400 (read)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,369 | INFO     | using path: /var/lib/boinc/slots/26/PanDA_Pilot-7036587219/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,370 | INFO     | extracted standard info from prmon json
[2026-03-04 12:14:44] 2026-03-04 11:13:47,370 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 12:14:44] 2026-03-04 11:13:47,370 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 12:14:44] 2026-03-04 11:13:47,370 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 12:14:44] 2026-03-04 11:13:47,370 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 12:14:44] 2026-03-04 11:13:47,375 | INFO     | fitting pss+swap vs Time
[2026-03-04 12:14:44] 2026-03-04 11:13:47,375 | INFO     | sum of square deviations: 2443580700.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,377 | INFO     | sum of deviations: 83085803594.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,377 | INFO     | mean x: 1772616768.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,377 | INFO     | mean y: 2398672.959798995
[2026-03-04 12:14:44] 2026-03-04 11:13:47,377 | INFO     | intersect: -60269516485.59382
[2026-03-04 12:14:44] 2026-03-04 11:13:47,378 | INFO     | chi2: 8.725894776194137
[2026-03-04 12:14:44] 2026-03-04 11:13:47,378 | INFO     | sum of square deviations: 2263977332.5
[2026-03-04 12:14:44] 2026-03-04 11:13:47,380 | INFO     | sum of deviations: 107263209287.00002
[2026-03-04 12:14:44] 2026-03-04 11:13:47,380 | INFO     | mean x: 1772616615.5
[2026-03-04 12:14:44] 2026-03-04 11:13:47,380 | INFO     | mean y: 2418856.2989690723
[2026-03-04 12:14:44] 2026-03-04 11:13:47,380 | INFO     | intersect: -83980995767.39412
[2026-03-04 12:14:44] 2026-03-04 11:13:47,381 | INFO     | chi2: 7.254500427402588
[2026-03-04 12:14:44] 2026-03-04 11:13:47,381 | INFO     | current chi2=7.254500427402588 (change=16.86238931972668 %)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,381 | INFO     | right removable region: 193
[2026-03-04 12:14:44] 2026-03-04 11:13:47,381 | INFO     | sum of square deviations: 2263977332.5
[2026-03-04 12:14:44] 2026-03-04 11:13:47,387 | INFO     | sum of deviations: 15475702928.000004
[2026-03-04 12:14:44] 2026-03-04 11:13:47,387 | INFO     | mean x: 1772616920.5
[2026-03-04 12:14:44] 2026-03-04 11:13:47,387 | INFO     | mean y: 2456026.9484536084
[2026-03-04 12:14:44] 2026-03-04 11:13:47,388 | INFO     | intersect: -12114490760.902922
[2026-03-04 12:14:44] 2026-03-04 11:13:47,388 | INFO     | chi2: 3.8058284387909276
[2026-03-04 12:14:44] 2026-03-04 11:13:47,388 | INFO     | current chi2=3.8058284387909276 (change=56.38466270331457 %)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,389 | INFO     | sum of square deviations: 2093397390.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,390 | INFO     | sum of deviations: -27561153834.000008
[2026-03-04 12:14:44] 2026-03-04 11:13:47,390 | INFO     | mean x: 1772617073.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,390 | INFO     | mean y: 2494325.708994709
[2026-03-04 12:14:44] 2026-03-04 11:13:47,390 | INFO     | intersect: 23340333606.06074
[2026-03-04 12:14:44] 2026-03-04 11:13:47,391 | INFO     | chi2: 1.7770658050299992
[2026-03-04 12:14:44] 2026-03-04 11:13:47,391 | INFO     | current chi2=1.7770658050299992 (change=53.306728518888406 %)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,391 | INFO     | sum of square deviations: 1931608310.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,393 | INFO     | sum of deviations: -30967997886.5
[2026-03-04 12:14:44] 2026-03-04 11:13:47,393 | INFO     | mean x: 1772617225.5
[2026-03-04 12:14:44] 2026-03-04 11:13:47,393 | INFO     | mean y: 2497460.179347826
[2026-03-04 12:14:44] 2026-03-04 11:13:47,393 | INFO     | intersect: 28421512955.540047
[2026-03-04 12:14:44] 2026-03-04 11:13:47,393 | INFO     | chi2: 1.729872853280919
[2026-03-04 12:14:44] 2026-03-04 11:13:47,394 | INFO     | current chi2=1.729872853280919 (change=2.655667089845524 %)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,394 | INFO     | left removable region: 30
[2026-03-04 12:14:44] 2026-03-04 11:13:47,394 | INFO     | sum of square deviations: 1342841922.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,395 | INFO     | sum of deviations: 3044604245.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,395 | INFO     | mean x: 1772617500.0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,396 | INFO     | mean y: 2512576.0858895704
[2026-03-04 12:14:44] 2026-03-04 11:13:47,396 | INFO     | intersect: -4016515037.5465713
[2026-03-04 12:14:44] 2026-03-04 11:13:47,396 | INFO     | chi2: 0.00012171411805885294
[2026-03-04 12:14:44] 2026-03-04 11:13:47,396 | INFO     | current memory leak: 2.27 B/s (using 163 data points, chi2=0.00)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,397 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,397 | INFO     | ..............................
[2026-03-04 12:14:44] 2026-03-04 11:13:47,397 | INFO     | . Timing measurements:
[2026-03-04 12:14:44] 2026-03-04 11:13:47,397 | INFO     | . get job = 0 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,398 | INFO     | . initial setup = 121 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,398 | INFO     | . payload setup = 150 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,398 | INFO     | . stage-in = 0 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,398 | INFO     | . payload execution = 12217 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,398 | INFO     | . stage-out = 3 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,398 | INFO     | . log creation = 1 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,398 | INFO     | ..............................
[2026-03-04 12:14:44] 2026-03-04 11:13:47,520 | INFO     | 
[2026-03-04 12:14:44] 2026-03-04 11:13:47,520 | INFO     | job summary report
[2026-03-04 12:14:44] 2026-03-04 11:13:47,520 | INFO     | --------------------------------------------------
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | PanDA job id: 7036587219
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | task id: 48868979
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | errors: (none)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | pilot state: finished 
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | transexitcode: 0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | exeerrorcode: 0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,521 | INFO     | exeerrordiag: 
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | exitcode: 0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | exitmsg: OK
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | cpuconsumptiontime: 59061 s
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | nevents: 400
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | neventsw: 0
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | pid: 16514
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | pgrp: 16514
[2026-03-04 12:14:44] 2026-03-04 11:13:47,522 | INFO     | corecount: 8
[2026-03-04 12:14:44] 2026-03-04 11:13:47,523 | INFO     | event service: False
[2026-03-04 12:14:44] 2026-03-04 11:13:47,523 | INFO     | sizes: {0: 2286568, 1: 2287025, 2: 2287113, 13: 2287113, 12371: 2316961, 12372: 2316960, 12376: 2326144, 12378: 2326200, 12381: 2326394}
[2026-03-04 12:14:44] 2026-03-04 11:13:47,523 | INFO     | --------------------------------------------------
[2026-03-04 12:14:44] 2026-03-04 11:13:47,523 | INFO     | 
[2026-03-04 12:14:44] 2026-03-04 11:13:47,523 | INFO     | executing command: ls -lF /var/lib/boinc/slots/26
[2026-03-04 12:14:44] 2026-03-04 11:13:47,987 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,987 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,987 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,987 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,987 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,988 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,989 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,989 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 12:14:44] 2026-03-04 11:13:47,989 | INFO     | job 7036587219 has completed (purged errors)
[2026-03-04 12:14:44] 2026-03-04 11:13:47,990 | INFO     | overall cleanup function is called
[2026-03-04 12:14:44] 2026-03-04 11:13:48,998 | INFO     | --- collectZombieJob: --- 10, [16514]
[2026-03-04 12:14:44] 2026-03-04 11:13:48,998 | INFO     | zombie collector waiting for pid 16514
[2026-03-04 12:14:44] 2026-03-04 11:13:48,998 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 12:14:44] 2026-03-04 11:13:48,998 | INFO     | collected zombie processes
[2026-03-04 12:14:44] 2026-03-04 11:13:48,999 | INFO     | will attempt to kill all subprocesses of pid=16514
[2026-03-04 12:14:44] 2026-03-04 11:13:49,086 | INFO     | process IDs to be killed: [16514] (in reverse order)
[2026-03-04 12:14:44] 2026-03-04 11:13:49,611 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 12:14:44] 2026-03-04 11:13:49,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 12:14:44] 2026-03-04 11:13:49,613 | INFO     | did not find any defunct processes belonging to 16514
[2026-03-04 12:14:44] 2026-03-04 11:13:49,615 | INFO     | did not find any defunct processes belonging to 16514
[2026-03-04 12:14:44] 2026-03-04 11:13:49,615 | INFO     | ready for new job
[2026-03-04 12:14:44] 2026-03-04 11:13:49,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 12:14:44] 2026-03-04 11:13:49,617 | INFO     | **************************************
[2026-03-04 12:14:44] 2026-03-04 11:13:49,617 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 12:14:44] 2026-03-04 11:13:49,618 | INFO     | **************************************
[2026-03-04 12:14:44] 2026-03-04 11:13:49,618 | INFO     | 
[2026-03-04 12:14:44] 2026-03-04 11:13:49,618 | INFO     | pilot is running in a VM
[2026-03-04 12:14:44] 2026-03-04 11:13:49,618 | INFO     | architecture information:
[2026-03-04 12:14:44] 2026-03-04 11:13:49,627 | INFO     | executing command: cat /etc/os-release
[2026-03-04 12:14:44] 2026-03-04 11:13:49,929 | INFO     | cat /etc/os-release:
[2026-03-04 12:14:44] NAME="CentOS Linux"
[2026-03-04 12:14:44] VERSION="7 (Core)"
[2026-03-04 12:14:44] ID="centos"
[2026-03-04 12:14:44] ID_LIKE="rhel fedora"
[2026-03-04 12:14:44] VERSION_ID="7"
[2026-03-04 12:14:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 12:14:44] ANSI_COLOR="0;31"
[2026-03-04 12:14:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 12:14:44] HOME_URL="https://www.centos.org/"
[2026-03-04 12:14:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 12:14:44] 
[2026-03-04 12:14:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 12:14:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 12:14:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 12:14:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 12:14:44] 
[2026-03-04 12:14:44] 2026-03-04 11:13:49,930 | INFO     | **************************************
[2026-03-04 12:14:44] 2026-03-04 11:13:50,433 | INFO     | executing command: df -mP /var/lib/boinc/slots/26
[2026-03-04 12:14:44] 2026-03-04 11:13:50,583 | INFO     | sufficient remaining disk space (496647536640 B)
[2026-03-04 12:14:44] 2026-03-04 11:13:50,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 12:14:44] 2026-03-04 11:13:50,584 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 12:14:44] 2026-03-04 11:13:50,584 | INFO     | update_server=False
[2026-03-04 12:14:44] 2026-03-04 11:13:50,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 12:14:44] 2026-03-04 11:13:50,585 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:14:44] 2026-03-04 11:13:50,585 | INFO     | aborting loop
[2026-03-04 12:14:44] 2026-03-04 11:13:50,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 12:14:44] 2026-03-04 11:13:50,682 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 12:14:44] 2026-03-04 11:13:51,174 | INFO     | all payload control threads have been joined
[2026-03-04 12:14:44] 2026-03-04 11:13:51,394 | INFO     | all data control threads have been joined
[2026-03-04 12:14:44] 2026-03-04 11:13:51,586 | INFO     | all job control threads have been joined
[2026-03-04 12:14:44] 2026-03-04 11:13:51,590 | INFO     | [job] retrieve thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:51,591 | INFO     | [job] job monitor thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,010 | INFO     | [payload] failed_post thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,180 | INFO     | [payload] control thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,309 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,352 | INFO     | [payload] validate_post thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,400 | INFO     | [data] control thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,539 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:14:44] 2026-03-04 11:13:52,595 | INFO     | [job] control thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,639 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,657 | INFO     | [data] copytool_in thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,689 | INFO     | [data] copytool_out thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:52,930 | INFO     | [job] validate thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:53,002 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:53,545 | INFO     | [job] queue monitor thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:13:54,599 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:14:01,483 | INFO     | job.realtimelogging is not enabled
[2026-03-04 12:14:44] 2026-03-04 11:14:02,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 12:14:44] 2026-03-04 11:14:20,393 | INFO     | PID=12067 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 12:14:44] 2026-03-04 11:14:20,393 | INFO     | .. there are 2 such processes running
[2026-03-04 12:14:44] 2026-03-04 11:14:20,395 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 12:14:44] 2026-03-04 11:14:20,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 12:14:44] 2026-03-04 11:14:20,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 12:14:44] 2026-03-04 11:14:33,508 | INFO     | [monitor] cgroup control has ended
[2026-03-04 12:14:44] 2026-03-04 11:14:33,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140345653098304)>', '<ExcThread(monitor, started 140345220257536)>']
[2026-03-04 12:14:44] 2026-03-04 11:14:34,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 12:14:44] 2026-03-04 11:14:34,479 | INFO     | [monitor] control thread has ended
[2026-03-04 12:14:44] 2026-03-04 11:14:38,542 | INFO     | all workflow threads have been joined
[2026-03-04 12:14:44] 2026-03-04 11:14:38,542 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 12:14:44] 2026-03-04 11:14:38,542 | INFO     | traces error code: 0
[2026-03-04 12:14:44] 2026-03-04 11:14:38,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 12:14:44] 2026-03-04 11:14:39,012 [wrapper] ==== pilot stdout END ====
[2026-03-04 12:14:44] 2026-03-04 11:14:39,125 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 12:14:44] 2026-03-04 11:14:39,183 [wrapper] pilotpid: 12067
[2026-03-04 12:14:44] 2026-03-04 11:14:39,313 [wrapper] Pilot exit status: 0
[2026-03-04 12:14:44] 2026-03-04 11:14:39,851 [wrapper] pandaids: 7036587219
[2026-03-04 12:14:44] 2026-03-04 11:14:40,757 [wrapper] cleanup supervisor_pilot  1899 12068
[2026-03-04 12:14:44] 2026-03-04 11:14:40,842 [wrapper] Test setup, not cleaning
[2026-03-04 12:14:44] 2026-03-04 11:14:40,928 [wrapper] apfmon messages muted
[2026-03-04 12:14:44] 2026-03-04 11:14:41,040 [wrapper] ==== wrapper stdout END ====
[2026-03-04 12:14:44] 2026-03-04 11:14:41,169 [wrapper] ==== wrapper stderr END ====
[2026-03-04 12:14:44]  *** Error codes and diagnostics ***
[2026-03-04 12:14:44]     "exeErrorCode": 0,
[2026-03-04 12:14:44]     "exeErrorDiag": "",
[2026-03-04 12:14:44]     "pilotErrorCode": 0,
[2026-03-04 12:14:44]     "pilotErrorDiag": "",
[2026-03-04 12:14:44]  *** Listing of results directory ***
[2026-03-04 12:14:44] total 499012
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc    584627 Mar  3 20:48 pilot3.tar.gz
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc      5111 Mar  3 21:48 queuedata.json
[2026-03-04 12:14:44] -rwx------. 1 boinc boinc     36322 Mar  3 21:49 runpilot2-wrapper.sh
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc       100 Mar  4 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 12:14:44] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 08:40 run_atlas
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc       105 Mar  4 08:40 job.xml
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc      6392 Mar  4 08:40 init_data.xml
[2026-03-04 12:14:44] -rw-r--r--. 2 boinc boinc 293471402 Mar  4 08:40 EVNT.48717036._000032.pool.root.1
[2026-03-04 12:14:44] -rw-r--r--. 2 boinc boinc     15845 Mar  4 08:40 start_atlas.sh
[2026-03-04 12:14:44] drwxrwx--x. 2 boinc boinc        68 Mar  4 08:40 shared
[2026-03-04 12:14:44] -rw-r--r--. 2 boinc boinc    597962 Mar  4 08:40 input.tar.gz
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc         0 Mar  4 08:40 boinc_lockfile
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc      2594 Mar  4 08:41 pandaJob.out
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc       415 Mar  4 08:47 workernode_map.json
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc    997360 Mar  4 08:47 agis_schedconf.cvmfs.json
[2026-03-04 12:14:44] drwx------. 5 boinc boinc      4096 Mar  4 08:47 pilot3
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc 209191483 Mar  4 12:12 HITS.48868979._000790.pool.root.1
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc       531 Mar  4 12:12 boinc_task_state.xml
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc      1022 Mar  4 12:13 memory_monitor_summary.json
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc   1516092 Mar  4 12:13 agis_ddmendpoints.agis.ALL.json
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc    438990 Mar  4 12:13 log.48868979._000790.job.log.tgz.1
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc      6318 Mar  4 12:13 heartbeat.json
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc      8192 Mar  4 12:14 boinc_mmap_file
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc        28 Mar  4 12:14 wrapper_checkpoint.txt
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc        95 Mar  4 12:14 pilot_heartbeat.json
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc      4953 Mar  4 12:14 pilotlog.txt
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc   1760634 Mar  4 12:14 log.48868979._000790.job.log.1
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc       357 Mar  4 12:14 output.list
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc       620 Mar  4 12:14 runtime_log
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc   2222080 Mar  4 12:14 result.tar.gz
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc       654 Mar  4 12:14 va6KDmErlH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmCSFLDmeW8hMo.diag
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc      8832 Mar  4 12:14 runtime_log.err
[2026-03-04 12:14:44] -rw-r--r--. 1 boinc boinc     20715 Mar  4 12:14 stderr.txt
[2026-03-04 12:14:44] HITS file was successfully produced:
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc 209191483 Mar  4 12:12 shared/HITS.pool.root.1
[2026-03-04 12:14:44]  *** Contents of shared directory: ***
[2026-03-04 12:14:44] total 493660
[2026-03-04 12:14:44] -rw-r--r--. 2 boinc boinc 293471402 Mar  4 08:40 ATLAS.root_0
[2026-03-04 12:14:44] -rw-r--r--. 2 boinc boinc     15845 Mar  4 08:40 start_atlas.sh
[2026-03-04 12:14:44] -rw-r--r--. 2 boinc boinc    597962 Mar  4 08:40 input.tar.gz
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc 209191483 Mar  4 12:12 HITS.pool.root.1
[2026-03-04 12:14:44] -rw-------. 1 boinc boinc   2222080 Mar  4 12:14 result.tar.gz
12:14:46 (8069): run_atlas exited; CPU time 59190.691432
12:14:46 (8069): called boinc_finish(0)

</stderr_txt>
]]>

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