Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:51 (2784607): wrapper (7.7.26015): starting
04:00:51 (2784607): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 04:00:51] Arguments: --nthreads 4
[2026-03-04 04:00:51] Threads: 4
[2026-03-04 04:00:51] Checking for CVMFS
[2026-03-04 04:00:51] No cvmfs_config command found, will try listing directly
[2026-03-04 04:00:51] CVMFS is ok
[2026-03-04 04:00:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 04:00:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 04:00:51] Further information can be found at the LHC@home message board.
[2026-03-04 04:00:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 04:00:51] Checking for apptainer binary...
[2026-03-04 04:00:51] which: no apptainer in ((null))
[2026-03-04 04:00:51] apptainer is not installed, using version from CVMFS
[2026-03-04 04:00:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 04:00:51] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut27.grid.cesnet.cz
[2026-03-04 04:00:51] apptainer works
[2026-03-04 04:00:51] Set ATHENA_PROC_NUMBER=4
[2026-03-04 04:00:51] Set ATHENA_CORE_NUMBER=4
[2026-03-04 04:00:51] Starting ATLAS job with PandaID=7036325146
[2026-03-04 04:00:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 05:14:20]  *** The last 200 lines of the pilot log: ***
[2026-03-04 05:14:20]  protocol_id=None
[2026-03-04 05:14:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 05:14:20]  replicas=None
[2026-03-04 05:14:20]  scope=mc23_13p6TeV
[2026-03-04 05:14:20]  status=None
[2026-03-04 05:14:20]  status_code=0
[2026-03-04 05:14:20]  storage_token=
[2026-03-04 05:14:20]  surl=/var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7036325146/log.48700946._003297.job.log.tgz.1
[2026-03-04 05:14:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/07/log.48700946._003297.job.log.tgz.1
[2026-03-04 05:14:20]  workdir=None
[2026-03-04 05:14:20] ]
[2026-03-04 05:14:20] 2026-03-04 04:11:24,040 | INFO     | transferring file log.48700946._003297.job.log.tgz.1 from /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7036325146/log.48700946._003297.job.log.tgz.1 to /var/lib/b
[2026-03-04 05:14:20] 2026-03-04 04:11:24,040 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7036325146/log.48700946._003297.job.log.tgz.1 /var/lib/boinc/var/slot96/slots/1/lo
[2026-03-04 05:14:20] 2026-03-04 04:11:24,060 | INFO     | adding to output.list: log.48700946._003297.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3f/07/log.48700946._003297.job.log.tg
[2026-03-04 05:14:20] 2026-03-04 04:11:24,061 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 05:14:20] 2026-03-04 04:11:24,061 | INFO     | summary of transferred files:
[2026-03-04 05:14:20] 2026-03-04 04:11:24,061 | INFO     |  -- lfn=log.48700946._003297.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 05:14:20] 2026-03-04 04:11:24,061 | INFO     | stage-out finished correctly
[2026-03-04 05:14:20] 2026-03-04 04:11:25,106 | INFO     | time since job start (4219s) is within the limit (349056.0s)
[2026-03-04 05:14:20] 2026-03-04 04:11:27,111 | INFO     | time since job start (4221s) is within the limit (349056.0s)
[2026-03-04 05:14:20] 2026-03-04 04:11:27,236 | WARNING  | process 2805349 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 05:14:20] 2026-03-04 04:11:27,237 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7036325146/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 05:14:20] 2026-03-04 04:11:27,528 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 05:14:20] 2026-03-04 04:11:27,838 | INFO     | number of running child processes to parent process 2805349: 1
[2026-03-04 05:14:20] 2026-03-04 04:11:27,838 | INFO     | maximum number of monitored processes: 6
[2026-03-04 05:14:20] 2026-03-04 04:11:29,118 | INFO     | time since job start (4223s) is within the limit (349056.0s)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,312 | INFO     | job 7036325146 has state=finished
[2026-03-04 05:14:20] 2026-03-04 04:11:30,312 | INFO     | preparing for final server update for job 7036325146 in state='finished'
[2026-03-04 05:14:20] 2026-03-04 04:11:30,341 | INFO     | monitor loop #303: job 0:7036325146 is in state 'finished'
[2026-03-04 05:14:20] 2026-03-04 04:11:30,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,885 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,885 | INFO     | reading metadata from: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7036325146/jobReport.json
[2026-03-04 05:14:20] 2026-03-04 04:11:30,887 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot96/slots/1/workernode_map.json
[2026-03-04 05:14:20] 2026-03-04 04:11:30,887 | INFO     | this job has now completed (state=finished)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,887 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,887 | INFO     | log transfer has been attempted: DONE
[2026-03-04 05:14:20] 2026-03-04 04:11:30,887 | INFO     | job 7036325146 has finished - writing final server update
[2026-03-04 05:14:20] 2026-03-04 04:11:30,887 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1748897/.job.ad'
[2026-03-04 05:14:20] 2026-03-04 04:11:30,887 | INFO     | total number of processed events: 400 (read)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,914 | INFO     | using path: /var/lib/boinc/var/slot96/slots/1/PanDA_Pilot-7036325146/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,914 | INFO     | extracted standard info from prmon json
[2026-03-04 05:14:20] 2026-03-04 04:11:30,914 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 05:14:20] 2026-03-04 04:11:30,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 05:14:20] 2026-03-04 04:11:30,915 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 05:14:20] 2026-03-04 04:11:30,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | fitting pss+swap vs Time
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | sum of square deviations: 73882315.5
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | sum of deviations: 547827976.5
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | mean x: 1772595454.5
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | mean y: 2315295.0483870967
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | intersect: -13141254643.441599
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | chi2: 0.0003161217775713093
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | current memory leak: 7.41 B/s (using 62 data points, chi2=0.00)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | could have reported an average CPU frequency of 3579 MHz (6 samples)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | ..............................
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | . Timing measurements:
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | . get job = 0 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | . initial setup = 5 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | . payload setup = 5 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | . stage-in = 0 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,916 | INFO     | . payload execution = 4195 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,917 | INFO     | . stage-out = 0 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,917 | INFO     | . log creation = 0 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,917 | INFO     | ..............................
[2026-03-04 05:14:20] 2026-03-04 04:11:30,971 | INFO     | 
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | job summary report
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | --------------------------------------------------
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | PanDA job id: 7036325146
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | task id: 48700946
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | errors: (none)
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | pilot state: finished 
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | transexitcode: 0
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | exeerrorcode: 0
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | exeerrordiag: 
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | exitcode: 0
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | exitmsg: OK
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | cpuconsumptiontime: 15889 s
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | nevents: 400
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | neventsw: 0
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | pid: 2805349
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | pgrp: 2805349
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | corecount: 4
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | event service: False
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | sizes: {0: 2286742, 1: 2287032, 11: 2287032, 4204: 2312983, 4205: 2312982, 4207: 2322058, 4210: 2322242, 4214: 2322436}
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | --------------------------------------------------
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | 
[2026-03-04 05:14:20] 2026-03-04 04:11:30,972 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot96/slots/1
[2026-03-04 05:14:20] 2026-03-04 04:11:31,001 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,001 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,002 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,015 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 05:14:20] 2026-03-04 04:11:31,016 | INFO     | job 7036325146 has completed (purged errors)
[2026-03-04 05:14:20] 2026-03-04 04:11:31,016 | INFO     | overall cleanup function is called
[2026-03-04 05:14:20] 2026-03-04 04:11:32,031 | INFO     | --- collectZombieJob: --- 10, [2805349]
[2026-03-04 05:14:20] 2026-03-04 04:11:32,031 | INFO     | zombie collector waiting for pid 2805349
[2026-03-04 05:14:20] 2026-03-04 04:11:32,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 05:14:20] 2026-03-04 04:11:32,031 | INFO     | collected zombie processes
[2026-03-04 05:14:20] 2026-03-04 04:11:32,031 | INFO     | will attempt to kill all subprocesses of pid=2805349
[2026-03-04 05:14:20] 2026-03-04 04:11:32,560 | INFO     | process IDs to be killed: [2805349] (in reverse order)
[2026-03-04 05:14:20] 2026-03-04 04:11:32,809 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 05:14:20] 2026-03-04 04:11:32,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 05:14:20] 2026-03-04 04:11:32,844 | INFO     | did not find any defunct processes belonging to 2805349
[2026-03-04 05:14:20] 2026-03-04 04:11:32,876 | INFO     | did not find any defunct processes belonging to 2805349
[2026-03-04 05:14:20] 2026-03-04 04:11:32,877 | INFO     | ready for new job
[2026-03-04 05:14:20] 2026-03-04 04:11:32,877 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 05:14:20] 2026-03-04 04:11:32,878 | INFO     | **************************************
[2026-03-04 05:14:20] 2026-03-04 04:11:32,878 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 05:14:20] 2026-03-04 04:11:32,878 | INFO     | **************************************
[2026-03-04 05:14:20] 2026-03-04 04:11:32,878 | INFO     | 
[2026-03-04 05:14:20] 2026-03-04 04:11:32,884 | INFO     | architecture information:
[2026-03-04 05:14:20] 2026-03-04 04:11:32,884 | INFO     | executing command: cat /etc/os-release
[2026-03-04 05:14:20] 2026-03-04 04:11:32,898 | INFO     | cat /etc/os-release:
[2026-03-04 05:14:20] NAME="CentOS Linux"
[2026-03-04 05:14:20] VERSION="7 (Core)"
[2026-03-04 05:14:20] ID="centos"
[2026-03-04 05:14:20] ID_LIKE="rhel fedora"
[2026-03-04 05:14:20] VERSION_ID="7"
[2026-03-04 05:14:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 05:14:20] ANSI_COLOR="0;31"
[2026-03-04 05:14:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 05:14:20] HOME_URL="https://www.centos.org/"
[2026-03-04 05:14:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 05:14:20] 
[2026-03-04 05:14:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 05:14:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 05:14:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 05:14:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 05:14:20] 
[2026-03-04 05:14:20] 2026-03-04 04:11:32,898 | INFO     | **************************************
[2026-03-04 05:14:20] 2026-03-04 04:11:33,400 | INFO     | executing command: df -mP /var/lib/boinc/var/slot96/slots/1
[2026-03-04 05:14:20] 2026-03-04 04:11:33,417 | INFO     | sufficient remaining disk space (20691550208 B)
[2026-03-04 05:14:20] 2026-03-04 04:11:33,418 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 05:14:20] 2026-03-04 04:11:33,418 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 05:14:20] 2026-03-04 04:11:33,418 | INFO     | update_server=False
[2026-03-04 05:14:20] 2026-03-04 04:11:33,418 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 05:14:20] 2026-03-04 04:11:33,491 | INFO     | all data control threads have been joined
[2026-03-04 05:14:20] 2026-03-04 04:11:33,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 05:14:20] 2026-03-04 04:11:33,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 05:14:20] 2026-03-04 04:11:33,853 | INFO     | aborting loop
[2026-03-04 05:14:20] 2026-03-04 04:11:34,260 | INFO     | all job control threads have been joined
[2026-03-04 05:14:20] 2026-03-04 04:11:34,423 | INFO     | [job] retrieve thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:34,496 | INFO     | [data] control thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:34,525 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:34,628 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 05:14:20] 2026-03-04 04:11:34,738 | INFO     | all payload control threads have been joined
[2026-03-04 05:14:20] 2026-03-04 04:11:34,858 | INFO     | [job] job monitor thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,265 | INFO     | [job] control thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,380 | INFO     | [job] validate thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,543 | INFO     | [payload] failed_post thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,611 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,743 | INFO     | [payload] control thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,818 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,853 | INFO     | [data] copytool_in thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:35,981 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 05:14:20] 2026-03-04 04:11:36,012 | INFO     | [payload] validate_post thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:36,633 | INFO     | [data] copytool_out thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:36,986 | INFO     | [job] queue monitor thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:37,618 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:11:43,826 | INFO     | job.realtimelogging is not enabled
[2026-03-04 05:14:20] 2026-03-04 04:11:44,831 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 05:14:20] 2026-03-04 04:12:02,923 | INFO     | PID=2793251 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 05:14:20] 2026-03-04 04:12:02,923 | INFO     | .. there are 40 such processes running
[2026-03-04 05:14:20] 2026-03-04 04:12:02,923 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 05:14:20] 2026-03-04 04:12:02,923 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 05:14:20] 2026-03-04 04:12:02,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 05:14:20] 2026-03-04 04:12:12,991 | INFO     | [monitor] cgroup control has ended
[2026-03-04 05:14:20] 2026-03-04 04:12:14,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22681061594944)>', '<ExcThread(monitor, started 22680823936768)>']
[2026-03-04 05:14:20] 2026-03-04 04:12:14,990 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 05:14:20] 2026-03-04 04:12:14,990 | INFO     | [monitor] control thread has ended
[2026-03-04 05:14:20] 2026-03-04 04:12:19,570 | INFO     | all workflow threads have been joined
[2026-03-04 05:14:20] 2026-03-04 04:12:19,570 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 05:14:20] 2026-03-04 04:12:19,570 | INFO     | traces error code: 0
[2026-03-04 05:14:20] 2026-03-04 04:12:19,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 05:14:20] 2026-03-04 04:12:19,720 [wrapper] ==== pilot stdout END ====
[2026-03-04 05:14:20] 2026-03-04 04:12:19,722 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 05:14:20] 2026-03-04 04:12:19,723 [wrapper] pilotpid: 2793251
[2026-03-04 05:14:20] 2026-03-04 04:12:19,724 [wrapper] Pilot exit status: 0
[2026-03-04 05:14:20] 2026-03-04 04:12:19,731 [wrapper] pandaids: 7036325146
[2026-03-04 05:14:20] 2026-03-04 04:12:19,878 [wrapper] cleanup supervisor_pilot 3373929 2793252
[2026-03-04 05:14:20] 2026-03-04 04:12:19,881 [wrapper] Test setup, not cleaning
[2026-03-04 05:14:20] 2026-03-04 04:12:19,883 [wrapper] apfmon messages muted
[2026-03-04 05:14:20] 2026-03-04 04:12:19,884 [wrapper] ==== wrapper stdout END ====
[2026-03-04 05:14:20] 2026-03-04 04:12:19,886 [wrapper] ==== wrapper stderr END ====
[2026-03-04 05:14:20]  *** Error codes and diagnostics ***
[2026-03-04 05:14:20]     "exeErrorCode": 0,
[2026-03-04 05:14:20]     "exeErrorDiag": "",
[2026-03-04 05:14:20]     "pilotErrorCode": 0,
[2026-03-04 05:14:20]     "pilotErrorDiag": "",
[2026-03-04 05:14:20]  *** Listing of results directory ***
[2026-03-04 05:14:20] total 338052
[2026-03-04 05:14:20] -rwx------. 1 boinc boinc     36322 Mar  3 14:35 runpilot2-wrapper.sh
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc      5111 Mar  3 14:35 queuedata.json
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc    584627 Mar  3 14:35 pilot3.tar.gz
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc       100 Mar  4 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 05:14:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 04:00 run_atlas
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc       105 Mar  4 04:00 job.xml
[2026-03-04 05:14:20] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:00 start_atlas.sh
[2026-03-04 05:14:20] drwxrwx--x. 2 boinc boinc      4096 Mar  4 04:00 shared
[2026-03-04 05:14:20] -rw-r--r--. 2 boinc boinc    597922 Mar  4 04:00 input.tar.gz
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc      6703 Mar  4 04:00 init_data.xml
[2026-03-04 05:14:20] -rw-r--r--. 2 boinc boinc 189120634 Mar  4 04:00 EVNT.48700944._000122.pool.root.1
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc         0 Mar  4 04:00 boinc_lockfile
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc      2500 Mar  4 04:00 pandaJob.out
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc    998484 Mar  4 04:01 agis_schedconf.cvmfs.json
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc   1516092 Mar  4 04:01 agis_ddmendpoints.agis.ALL.json
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc       444 Mar  4 04:01 workernode_map.json
[2026-03-04 05:14:20] drwx------. 5 boinc boinc      4096 Mar  4 04:01 pilot3
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc 151336147 Mar  4 05:10 HITS.48700946._003297.pool.root.1
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc        95 Mar  4 05:11 pilot_heartbeat.json
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc       528 Mar  4 05:11 boinc_task_state.xml
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc      1031 Mar  4 05:11 memory_monitor_summary.json
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc    270060 Mar  4 05:11 log.48700946._003297.job.log.tgz.1
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc      6352 Mar  4 05:11 heartbeat.json
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc      4901 Mar  4 05:12 pilotlog.txt
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc    623208 Mar  4 05:12 log.48700946._003297.job.log.1
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc       357 Mar  4 05:12 output.list
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc       620 Mar  4 05:12 runtime_log
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc    911360 Mar  4 05:12 result.tar.gz
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc      9204 Mar  4 05:12 runtime_log.err
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc       662 Mar  4 05:12 hNdMDmy5eH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6ZGLDmfjRAVm.diag
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc        26 Mar  4 05:14 wrapper_checkpoint.txt
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc      8192 Mar  4 05:14 boinc_mmap_file
[2026-03-04 05:14:20] -rw-r--r--. 1 boinc boinc      4659 Mar  4 05:14 stderr.txt
[2026-03-04 05:14:20] HITS file was successfully produced:
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc 151336147 Mar  4 05:10 shared/HITS.pool.root.1
[2026-03-04 05:14:20]  *** Contents of shared directory: ***
[2026-03-04 05:14:20] total 333984
[2026-03-04 05:14:20] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:00 start_atlas.sh
[2026-03-04 05:14:20] -rw-r--r--. 2 boinc boinc    597922 Mar  4 04:00 input.tar.gz
[2026-03-04 05:14:20] -rw-r--r--. 2 boinc boinc 189120634 Mar  4 04:00 ATLAS.root_0
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc 151336147 Mar  4 05:10 HITS.pool.root.1
[2026-03-04 05:14:20] -rw-------. 1 boinc boinc    911360 Mar  4 05:12 result.tar.gz
05:14:21 (2784607): run_atlas exited; CPU time 16096.297855
05:14:21 (2784607): called boinc_finish(0)

</stderr_txt>
]]>

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