Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:28:28 (1643717): wrapper (7.7.26015): starting
05:28:28 (1643717): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 05:28:28] Arguments: --nthreads 4
[2026-03-04 05:28:28] Threads: 4
[2026-03-04 05:28:28] Checking for CVMFS
[2026-03-04 05:28:28] No cvmfs_config command found, will try listing directly
[2026-03-04 05:28:28] CVMFS is ok
[2026-03-04 05:28:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 05:28:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 05:28:28] Further information can be found at the LHC@home message board.
[2026-03-04 05:28:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 05:28:28] Checking for apptainer binary...
[2026-03-04 05:28:28] which: no apptainer in ((null))
[2026-03-04 05:28:28] apptainer is not installed, using version from CVMFS
[2026-03-04 05:28:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 05:28:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-04 05:28:28] apptainer works
[2026-03-04 05:28:28] Set ATHENA_PROC_NUMBER=4
[2026-03-04 05:28:28] Set ATHENA_CORE_NUMBER=4
[2026-03-04 05:28:28] Starting ATLAS job with PandaID=7036368624
[2026-03-04 05:28:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 07:08:16]  *** The last 200 lines of the pilot log: ***
[2026-03-04 07:08:16]  is_altstaged=None
[2026-03-04 07:08:16]  is_tar=False
[2026-03-04 07:08:16]  lfn=log.48700938._002611.job.log.tgz.1
[2026-03-04 07:08:16]  mtime=0
[2026-03-04 07:08:16]  protocol_id=None
[2026-03-04 07:08:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 07:08:16]  replicas=None
[2026-03-04 07:08:16]  scope=mc23_13p6TeV
[2026-03-04 07:08:16]  status=None
[2026-03-04 07:08:16]  status_code=0
[2026-03-04 07:08:16]  storage_token=
[2026-03-04 07:08:16]  surl=/scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7036368624/log.48700938._002611.job.log.tgz.1
[2026-03-04 07:08:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/85/log.48700938._002611.job.log.tgz.1
[2026-03-04 07:08:16]  workdir=None
[2026-03-04 07:08:16] ]
[2026-03-04 07:08:16] 2026-03-04 06:07:40,708 | INFO     | transferring file log.48700938._002611.job.log.tgz.1 from /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7036368624/log.48700938._002611.job.log.tgz.1 to /scratch/b
[2026-03-04 07:08:16] 2026-03-04 06:07:40,708 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7036368624/log.48700938._002611.job.log.tgz.1 /scratch/boinc/var/slot76/slots/0/lo
[2026-03-04 07:08:16] 2026-03-04 06:07:40,737 | INFO     | adding to output.list: log.48700938._002611.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/76/85/log.48700938._002611.job.log.tg
[2026-03-04 07:08:16] 2026-03-04 06:07:40,738 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 07:08:16] 2026-03-04 06:07:40,738 | INFO     | summary of transferred files:
[2026-03-04 07:08:16] 2026-03-04 06:07:40,738 | INFO     |  -- lfn=log.48700938._002611.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 07:08:16] 2026-03-04 06:07:40,739 | INFO     | stage-out finished correctly
[2026-03-04 07:08:16] 2026-03-04 06:07:40,834 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 07:08:16] 2026-03-04 06:07:41,752 | INFO     | job 7036368624 has state=finished
[2026-03-04 07:08:16] 2026-03-04 06:07:41,752 | INFO     | preparing for final server update for job 7036368624 in state='finished'
[2026-03-04 07:08:16] 2026-03-04 06:07:41,836 | INFO     | monitor loop #424: job 0:7036368624 is in state 'finished'
[2026-03-04 07:08:16] 2026-03-04 06:07:41,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,166 | INFO     | time since job start (5935s) is within the limit (349056.0s)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,314 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,314 | INFO     | reading metadata from: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7036368624/jobReport.json
[2026-03-04 07:08:16] 2026-03-04 06:07:42,316 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot76/slots/0/workernode_map.json
[2026-03-04 07:08:16] 2026-03-04 06:07:42,316 | INFO     | this job has now completed (state=finished)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,316 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,316 | INFO     | log transfer has been attempted: DONE
[2026-03-04 07:08:16] 2026-03-04 06:07:42,316 | INFO     | job 7036368624 has finished - writing final server update
[2026-03-04 07:08:16] 2026-03-04 06:07:42,316 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3173852/.job.ad'
[2026-03-04 07:08:16] 2026-03-04 06:07:42,316 | INFO     | total number of processed events: 400 (read)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,332 | INFO     | using path: /scratch/boinc/var/slot76/slots/0/PanDA_Pilot-7036368624/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,332 | INFO     | extracted standard info from prmon json
[2026-03-04 07:08:16] 2026-03-04 06:07:42,333 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 07:08:16] 2026-03-04 06:07:42,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 07:08:16] 2026-03-04 06:07:42,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 07:08:16] 2026-03-04 06:07:42,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 07:08:16] 2026-03-04 06:07:42,334 | INFO     | fitting pss+swap vs Time
[2026-03-04 07:08:16] 2026-03-04 06:07:42,334 | INFO     | sum of square deviations: 226022842.5
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | sum of deviations: -10129041764.999998
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | mean x: 1772601571.5
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | mean y: 2379211.2
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | intersect: 79440170329.27307
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | chi2: 0.03192379123970181
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | current memory leak: -44.81 B/s (using 90 data points, chi2=0.03)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | could have reported an average CPU frequency of 2762 MHz (7 samples)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | ..............................
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | . Timing measurements:
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | . get job = 0 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,335 | INFO     | . initial setup = 7 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,336 | INFO     | . payload setup = 7 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,336 | INFO     | . stage-in = 0 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,336 | INFO     | . payload execution = 5910 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,336 | INFO     | . stage-out = 0 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,336 | INFO     | . log creation = 0 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,336 | INFO     | ..............................
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | 
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | job summary report
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | --------------------------------------------------
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | PanDA job id: 7036368624
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | task id: 48700938
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | errors: (none)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 07:08:16] 2026-03-04 06:07:42,685 | INFO     | pilot state: finished 
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | transexitcode: 0
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | exeerrorcode: 0
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | exeerrordiag: 
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | exitcode: 0
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | exitmsg: OK
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | cpuconsumptiontime: 22433 s
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | nevents: 400
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | neventsw: 0
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | pid: 1653462
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | pgrp: 1653462
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | corecount: 4
[2026-03-04 07:08:16] 2026-03-04 06:07:42,686 | INFO     | event service: False
[2026-03-04 07:08:16] 2026-03-04 06:07:42,687 | INFO     | sizes: {0: 2286571, 1: 2287032, 11: 2287032, 5921: 2313887, 5923: 2322963, 5924: 2323101}
[2026-03-04 07:08:16] 2026-03-04 06:07:42,687 | INFO     | --------------------------------------------------
[2026-03-04 07:08:16] 2026-03-04 06:07:42,687 | INFO     | 
[2026-03-04 07:08:16] 2026-03-04 06:07:42,687 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2026-03-04 07:08:16] 2026-03-04 06:07:42,715 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,715 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,717 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,717 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 07:08:16] 2026-03-04 06:07:42,717 | INFO     | job 7036368624 has completed (purged errors)
[2026-03-04 07:08:16] 2026-03-04 06:07:42,717 | INFO     | overall cleanup function is called
[2026-03-04 07:08:16] 2026-03-04 06:07:43,726 | INFO     | --- collectZombieJob: --- 10, [1653462]
[2026-03-04 07:08:16] 2026-03-04 06:07:43,726 | INFO     | zombie collector waiting for pid 1653462
[2026-03-04 07:08:16] 2026-03-04 06:07:43,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 07:08:16] 2026-03-04 06:07:43,726 | INFO     | collected zombie processes
[2026-03-04 07:08:16] 2026-03-04 06:07:43,726 | INFO     | will attempt to kill all subprocesses of pid=1653462
[2026-03-04 07:08:16] 2026-03-04 06:07:43,730 | INFO     | PID=1648302 has CPU usage=12.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 07:08:16] 2026-03-04 06:07:43,730 | INFO     | .. there are 17 such processes running
[2026-03-04 07:08:16] 2026-03-04 06:07:44,203 | INFO     | process IDs to be killed: [1653462] (in reverse order)
[2026-03-04 07:08:16] 2026-03-04 06:07:44,359 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 07:08:16] 2026-03-04 06:07:44,359 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 07:08:16] 2026-03-04 06:07:44,377 | INFO     | did not find any defunct processes belonging to 1653462
[2026-03-04 07:08:16] 2026-03-04 06:07:44,388 | INFO     | did not find any defunct processes belonging to 1653462
[2026-03-04 07:08:16] 2026-03-04 06:07:44,388 | INFO     | ready for new job
[2026-03-04 07:08:16] 2026-03-04 06:07:44,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 07:08:16] 2026-03-04 06:07:44,390 | INFO     | **************************************
[2026-03-04 07:08:16] 2026-03-04 06:07:44,390 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 07:08:16] 2026-03-04 06:07:44,390 | INFO     | **************************************
[2026-03-04 07:08:16] 2026-03-04 06:07:44,390 | INFO     | 
[2026-03-04 07:08:16] 2026-03-04 06:07:44,396 | INFO     | architecture information:
[2026-03-04 07:08:16] 2026-03-04 06:07:44,396 | INFO     | executing command: cat /etc/os-release
[2026-03-04 07:08:16] 2026-03-04 06:07:44,416 | INFO     | cat /etc/os-release:
[2026-03-04 07:08:16] NAME="CentOS Linux"
[2026-03-04 07:08:16] VERSION="7 (Core)"
[2026-03-04 07:08:16] ID="centos"
[2026-03-04 07:08:16] ID_LIKE="rhel fedora"
[2026-03-04 07:08:16] VERSION_ID="7"
[2026-03-04 07:08:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 07:08:16] ANSI_COLOR="0;31"
[2026-03-04 07:08:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 07:08:16] HOME_URL="https://www.centos.org/"
[2026-03-04 07:08:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 07:08:16] 
[2026-03-04 07:08:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 07:08:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 07:08:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 07:08:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 07:08:16] 
[2026-03-04 07:08:16] 2026-03-04 06:07:44,416 | INFO     | **************************************
[2026-03-04 07:08:16] 2026-03-04 06:07:44,919 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2026-03-04 07:08:16] 2026-03-04 06:07:44,944 | INFO     | sufficient remaining disk space (3320486821888 B)
[2026-03-04 07:08:16] 2026-03-04 06:07:44,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 07:08:16] 2026-03-04 06:07:44,945 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 07:08:16] 2026-03-04 06:07:44,945 | INFO     | update_server=False
[2026-03-04 07:08:16] 2026-03-04 06:07:44,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 07:08:16] 2026-03-04 06:07:45,250 | INFO     | all data control threads have been joined
[2026-03-04 07:08:16] 2026-03-04 06:07:45,345 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:08:16] 2026-03-04 06:07:45,345 | INFO     | aborting loop
[2026-03-04 07:08:16] 2026-03-04 06:07:45,505 | INFO     | all payload control threads have been joined
[2026-03-04 07:08:16] 2026-03-04 06:07:45,950 | INFO     | [job] retrieve thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:45,999 | INFO     | [data] copytool_in thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:46,256 | INFO     | [data] control thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:46,348 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 07:08:16] 2026-03-04 06:07:46,351 | INFO     | [job] job monitor thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:46,510 | INFO     | [payload] control thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:46,525 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:46,620 | INFO     | all job control threads have been joined
[2026-03-04 07:08:16] 2026-03-04 06:07:46,679 | INFO     | [job] validate thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:46,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 07:08:16] 2026-03-04 06:07:47,004 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:47,016 | INFO     | [payload] validate_post thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:47,193 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:47,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:08:16] 2026-03-04 06:07:47,483 | INFO     | [payload] failed_post thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:47,625 | INFO     | [job] control thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:48,354 | INFO     | [data] copytool_out thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:48,411 | INFO     | [job] queue monitor thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:50,944 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:55,626 | INFO     | [monitor] cgroup control has ended
[2026-03-04 07:08:16] 2026-03-04 06:07:55,881 | INFO     | job.realtimelogging is not enabled
[2026-03-04 07:08:16] 2026-03-04 06:07:56,887 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 07:08:16] 2026-03-04 06:07:58,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23306198312768)>', '<ExcThread(monitor, started 23305885021952)>']
[2026-03-04 07:08:16] 2026-03-04 06:08:03,763 | INFO     | all workflow threads have been joined
[2026-03-04 07:08:16] 2026-03-04 06:08:03,763 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 07:08:16] 2026-03-04 06:08:03,763 | INFO     | traces error code: 0
[2026-03-04 07:08:16] 2026-03-04 06:08:03,763 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 07:08:16] 2026-03-04 06:08:16,516 | INFO     | PID=1648302 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 07:08:16] 2026-03-04 06:08:16,517 | INFO     | .. there are 17 such processes running
[2026-03-04 07:08:16] 2026-03-04 06:08:16,518 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 07:08:16] 2026-03-04 06:08:16,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 07:08:16] 2026-03-04 06:08:16,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 07:08:16] 2026-03-04 06:08:16,518 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 07:08:16] 2026-03-04 06:08:16,518 | INFO     | [monitor] control thread has ended
[2026-03-04 07:08:16] 2026-03-04 06:08:16,673 [wrapper] ==== pilot stdout END ====
[2026-03-04 07:08:16] 2026-03-04 06:08:16,677 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 07:08:16] 2026-03-04 06:08:16,680 [wrapper] pilotpid: 1648302
[2026-03-04 07:08:16] 2026-03-04 06:08:16,684 [wrapper] Pilot exit status: 0
[2026-03-04 07:08:16] 2026-03-04 06:08:16,700 [wrapper] pandaids: 7036368624
[2026-03-04 07:08:16] 2026-03-04 06:08:16,845 [wrapper] cleanup supervisor_pilot 1814297 1648303
[2026-03-04 07:08:16] 2026-03-04 06:08:16,849 [wrapper] Test setup, not cleaning
[2026-03-04 07:08:16] 2026-03-04 06:08:16,853 [wrapper] apfmon messages muted
[2026-03-04 07:08:16] 2026-03-04 06:08:16,857 [wrapper] ==== wrapper stdout END ====
[2026-03-04 07:08:16] 2026-03-04 06:08:16,862 [wrapper] ==== wrapper stderr END ====
[2026-03-04 07:08:16]  *** Error codes and diagnostics ***
[2026-03-04 07:08:16]     "exeErrorCode": 0,
[2026-03-04 07:08:16]     "exeErrorDiag": "",
[2026-03-04 07:08:16]     "pilotErrorCode": 0,
[2026-03-04 07:08:16]     "pilotErrorDiag": "",
[2026-03-04 07:08:16]  *** Listing of results directory ***
[2026-03-04 07:08:16] total 334104
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc    584627 Mar  3 17:29 pilot3.tar.gz
[2026-03-04 07:08:16] -rwx------ 1 boinc boinc     36322 Mar  3 17:30 runpilot2-wrapper.sh
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc      5111 Mar  3 17:31 queuedata.json
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc       100 Mar  4 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 07:08:16] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 05:28 run_atlas
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc       105 Mar  4 05:28 job.xml
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc      6697 Mar  4 05:28 init_data.xml
[2026-03-04 07:08:16] -rw-r--r-- 2 boinc boinc 188287059 Mar  4 05:28 EVNT.48700936._000102.pool.root.1
[2026-03-04 07:08:16] -rw-r--r-- 2 boinc boinc    597930 Mar  4 05:28 input.tar.gz
[2026-03-04 07:08:16] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:28 start_atlas.sh
[2026-03-04 07:08:16] drwxrwx--x 2 boinc boinc      4096 Mar  4 05:28 shared
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc         0 Mar  4 05:28 boinc_lockfile
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc      2500 Mar  4 05:28 pandaJob.out
[2026-03-04 07:08:16] -rw------- 1 boinc boinc    997749 Mar  4 05:28 agis_schedconf.cvmfs.json
[2026-03-04 07:08:16] -rw------- 1 boinc boinc   1516092 Mar  4 05:28 agis_ddmendpoints.agis.ALL.json
[2026-03-04 07:08:16] -rw------- 1 boinc boinc       440 Mar  4 05:28 workernode_map.json
[2026-03-04 07:08:16] drwx------ 5 boinc boinc      4096 Mar  4 05:28 pilot3
[2026-03-04 07:08:16] -rw------- 1 boinc boinc 147610941 Mar  4 07:07 HITS.48700938._002611.pool.root.1
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc       529 Mar  4 07:07 boinc_task_state.xml
[2026-03-04 07:08:16] -rw------- 1 boinc boinc      1024 Mar  4 07:07 memory_monitor_summary.json
[2026-03-04 07:08:16] -rw------- 1 boinc boinc    298835 Mar  4 07:07 log.48700938._002611.job.log.tgz.1
[2026-03-04 07:08:16] -rw------- 1 boinc boinc      6344 Mar  4 07:07 heartbeat.json
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc      8192 Mar  4 07:07 boinc_mmap_file
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc        27 Mar  4 07:07 wrapper_checkpoint.txt
[2026-03-04 07:08:16] -rw------- 1 boinc boinc        95 Mar  4 07:08 pilot_heartbeat.json
[2026-03-04 07:08:16] -rw------- 1 boinc boinc       823 Mar  4 07:08 pilotlog.txt
[2026-03-04 07:08:16] -rw------- 1 boinc boinc    848792 Mar  4 07:08 log.48700938._002611.job.log.1
[2026-03-04 07:08:16] -rw------- 1 boinc boinc       357 Mar  4 07:08 output.list
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc       620 Mar  4 07:08 runtime_log
[2026-03-04 07:08:16] -rw------- 1 boinc boinc   1167360 Mar  4 07:08 result.tar.gz
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc      9204 Mar  4 07:08 runtime_log.err
[2026-03-04 07:08:16] -rw------- 1 boinc boinc       662 Mar  4 07:08 jooLDm7ohH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDma4GLDmcT1DNm.diag
[2026-03-04 07:08:16] -rw-r--r-- 1 boinc boinc     21403 Mar  4 07:08 stderr.txt
[2026-03-04 07:08:16] HITS file was successfully produced:
[2026-03-04 07:08:16] -rw------- 1 boinc boinc 147610941 Mar  4 07:07 shared/HITS.pool.root.1
[2026-03-04 07:08:16]  *** Contents of shared directory: ***
[2026-03-04 07:08:16] total 329776
[2026-03-04 07:08:16] -rw-r--r-- 2 boinc boinc 188287059 Mar  4 05:28 ATLAS.root_0
[2026-03-04 07:08:16] -rw-r--r-- 2 boinc boinc    597930 Mar  4 05:28 input.tar.gz
[2026-03-04 07:08:16] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:28 start_atlas.sh
[2026-03-04 07:08:16] -rw------- 1 boinc boinc 147610941 Mar  4 07:07 HITS.pool.root.1
[2026-03-04 07:08:16] -rw------- 1 boinc boinc   1167360 Mar  4 07:08 result.tar.gz
07:08:18 (1643717): run_atlas exited; CPU time 22702.167658
07:08:18 (1643717): called boinc_finish(0)

</stderr_txt>
]]>

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