Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 14:38:44 (5116): vboxwrapper version 26210
2026-03-06 14:38:44 (5116): BOINC client version: 8.0.2
2026-03-06 14:38:44 (5116): Detected: VirtualBox VboxManage Interface (Version: 5.2.44)
2026-03-06 14:38:45 (5116): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 14:38:45 (5116): Create VM. (boinc_bb2216b89f2b29f2, slot#15)
2026-03-06 14:38:45 (5116): Setting Memory Size for VM. (4800MB)
2026-03-06 14:38:46 (5116): Setting CPU Count for VM. (8)
2026-03-06 14:38:46 (5116): Setting Chipset Options for VM.
2026-03-06 14:38:46 (5116): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 14:38:46 (5116): Setting Boot Options for VM.
2026-03-06 14:38:47 (5116): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 14:38:47 (5116): Enabling VM Network Access.
2026-03-06 14:38:47 (5116): Disabling USB Support for VM.
2026-03-06 14:38:48 (5116): Disabling COM Port Support for VM.
2026-03-06 14:38:48 (5116): Disabling LPT Port Support for VM.
2026-03-06 14:38:48 (5116): Disabling Audio Support for VM.
2026-03-06 14:38:48 (5116): Disabling Clipboard Support for VM.
2026-03-06 14:38:49 (5116): Disabling Drag and Drop Support for VM.
2026-03-06 14:38:49 (5116): Adding storage controller(s) to VM.
2026-03-06 14:38:49 (5116): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 14:38:50 (5116): Adding VirtualBox Guest Additions to VM.
2026-03-06 14:38:50 (5116): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 14:38:51 (5116): forwarding host port 54206 to guest port 80
2026-03-06 14:38:51 (5116): Enabling remote desktop for VM.
2026-03-06 14:38:51 (5116): Enabling shared directory for VM.
2026-03-06 14:38:52 (5116): Starting VM using VBoxManage interface. (boinc_bb2216b89f2b29f2, slot#15)
2026-03-06 14:38:57 (5116): Successfully started VM. (PID = '21124')
2026-03-06 14:38:57 (5116): Reporting VM Process ID to BOINC.
2026-03-06 14:38:57 (5116): Guest Log: BIOS: VirtualBox 5.2.44
2026-03-06 14:38:57 (5116): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 14:38:57 (5116): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 14:38:57 (5116): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 14:38:57 (5116): Detected: Web Application Enabled (http://localhost:54206)
2026-03-06 14:38:57 (5116): Detected: Remote Desktop Enabled (localhost:54207)
2026-03-06 14:38:57 (5116): Preference change detected
2026-03-06 14:38:57 (5116): Setting CPU throttle for VM. (100%)
2026-03-06 14:38:57 (5116): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 14:38:59 (5116): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 14:38:59 (5116): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 14:39:02 (5116): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 14:39:02 (5116): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 14:39:02 (5116): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 14:39:08 (5116): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 14:39:08 (5116): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-03-06 14:39:15 (5116): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.000156 main     Log opened 2026-03-06T14:39:13.493666000Z
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.000263 main     OS Product: Linux
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.000314 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.000345 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.000373 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.000374 main     Process ID: 1371
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.000375 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 14:39:15 (5116): Guest Log: 00:00:00.001364 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 14:39:15 (5116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 14:39:15 (5116): Guest Log: [INFO] Mounting shared directory
2026-03-06 14:39:15 (5116): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 14:39:21 (5116): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 14:39:21 (5116): Guest Log: [INFO] Detected branch: prod
2026-03-06 14:39:22 (5116): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 14:39:22 (5116): Guest Log: Copying input files
2026-03-06 14:39:25 (5116): Guest Log: 00:00:10.003109 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 714 931 000ns (GuestNow=1 772 797 164 781 319 000 ns GuestLast=1 772 807 953 496 250 000 ns fSetTimeLastLoop=true )
2026-03-06 14:39:26 (5116): Guest Log: Copied input files into RunAtlas.
2026-03-06 14:39:26 (5116): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-06 14:39:26 (5116): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-06 14:39:26 (5116): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-06 14:39:26 (5116): Guest Log: Further information can be found at the LHC@home message board.
2026-03-06 14:39:36 (5116): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 14:39:36 (5116): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 14:39:36 (5116): Guest Log: 2.6.3.0 1649 0 30148 156955 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-06 14:39:38 (5116): Guest Log: copied the webapp to /var/www
2026-03-06 14:39:38 (5116): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-06 14:39:38 (5116): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-06 14:39:38 (5116): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 14:39:38 (5116): Guest Log:  *** Starting ATLAS job. (PandaID=7036108245 taskID=48838586) ***
2026-03-06 15:39:36 (5116): VM state change detected. (old = 'running', new = 'paused')
2026-03-06 16:23:17 (5116): Guest Log: 01:00:21.079524 timesync vgsvcTimeSyncWorker: Radical host time change: 2 631 697 000 000ns (HostNow=1 772 803 397 539 000 000 ns HostLast=1 772 800 765 842 000 000 ns)
2026-03-06 16:23:17 (5116): VM state change detected. (old = 'paused', new = 'running')
2026-03-06 16:23:27 (5116): Guest Log: 01:00:31.087286 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 631 689 636 000ns (GuestNow=1 772 803 407 546 907 000 ns GuestLast=1 772 800 775 857 271 000 ns fSetTimeLastLoop=true )
2026-03-06 16:58:54 (5116): Guest Log:  *** Job finished ***
2026-03-06 16:58:54 (5116): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:13,809 | INFO     | [data] copytool_out thread has finished
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:14,557 | INFO     | [data] queue_monitor thread has finished
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:47,354 | INFO     | [monitor] cgroup control has ended
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:47,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077883270976)>', '<ExcThread(monitor, started 140077430712064)>']
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:47,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:47,912 | INFO     | [monitor] control thread has ended
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,713 | INFO     | all workflow threads have been joined
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,714 | INFO     | end of generic workflow (traces error code: 0)
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,714 | INFO     | traces error code: 0
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,795 [wrapper] ==== pilot stdout END ====
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,802 [wrapper] ==== wrapper stdout RESUME ====
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,807 [wrapper] pilotpid: 6081
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,814 [wrapper] Pilot exit status: 0
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,888 [wrapper] pandaids: 7036108245
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,927 [wrapper] cleanup supervisor_pilot 25574 6082
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,938 [wrapper] Test setup, not cleaning
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,943 [wrapper] apfmon messages muted
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,949 [wrapper] ==== wrapper stdout END ====
2026-03-06 16:58:54 (5116): Guest Log: 2026-03-06 13:58:52,954 [wrapper] ==== wrapper stderr END ====
2026-03-06 16:58:54 (5116): Guest Log:  *** Error codes and diagnostics ***
2026-03-06 16:58:54 (5116): Guest Log:     "exeErrorCode": 0,
2026-03-06 16:58:54 (5116): Guest Log:     "exeErrorDiag": "",
2026-03-06 16:58:54 (5116): Guest Log:     "pilotErrorCode": 0,
2026-03-06 16:58:54 (5116): Guest Log:     "pilotErrorDiag": "",
2026-03-06 16:58:54 (5116): Guest Log:  *** Listing of results directory ***
2026-03-06 16:58:54 (5116): Guest Log: total 210720
2026-03-06 16:58:54 (5116): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  2 19:44 pilot3.tar.gz
2026-03-06 16:58:54 (5116): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  2 19:58 queuedata.json
2026-03-06 16:58:54 (5116): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  2 19:58 runpilot2-wrapper.sh
2026-03-06 16:58:54 (5116): Guest Log: -rwxr-xr-x. 1 atlas atlas      6197 Mar  6 11:39 init_data.xml
2026-03-06 16:58:54 (5116): Guest Log: -rwxr-xr-x. 1 atlas atlas    597949 Mar  6 11:39 input.tar.gz
2026-03-06 16:58:54 (5116): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  6 11:39 start_atlas.sh
2026-03-06 16:58:54 (5116): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 11:39 EVNT.48220221._000084.pool.root.1 -> /data/./ATLAS.root_0
2026-03-06 16:58:54 (5116): Guest Log: -rw-r--r--. 1 atlas atlas      2561 Mar  6 11:39 pandaJob.out
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas    998891 Mar  6 11:40 agis_schedconf.cvmfs.json
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  6 11:40 agis_ddmendpoints.agis.ALL.json
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas       439 Mar  6 11:40 workernode_map.json
2026-03-06 16:58:54 (5116): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 11:41 pilot3
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas        97 Mar  6 13:57 pilot_heartbeat.json
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas 209636654 Mar  6 13:57 HITS.48838586._002152.pool.root.1
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas      1032 Mar  6 13:58 memory_monitor_summary.json
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas    332275 Mar  6 13:58 log.48838586._002152.job.log.tgz.1
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas      6400 Mar  6 13:58 heartbeat.json
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas      4608 Mar  6 13:58 pilotlog.txt
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas    803658 Mar  6 13:58 log.48838586._002152.job.log.1
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas       357 Mar  6 13:58 output.list
2026-03-06 16:58:54 (5116): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  6 13:58 runtime_log
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas   1157120 Mar  6 13:58 result.tar.gz
2026-03-06 16:58:54 (5116): Guest Log: -rw-r--r--. 1 atlas atlas      8730 Mar  6 13:58 runtime_log.err
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas       647 Mar  6 13:58 4MmNDmdaOH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmweCLDmmaCvjm.diag
2026-03-06 16:58:54 (5116): Guest Log: Looking for outputfile HITS.48838586._002152.pool.root.1
2026-03-06 16:58:54 (5116): Guest Log: HITS file was successfully produced
2026-03-06 16:58:54 (5116): Guest Log: -rw-------. 1 atlas atlas 209636654 Mar  6 13:57 /home/atlas/RunAtlas/HITS.48838586._002152.pool.root.1
2026-03-06 16:58:55 (5116): Guest Log: Successfully finished the ATLAS job!
2026-03-06 16:58:55 (5116): Guest Log: Copying the results back to the shared directory!
2026-03-06 16:58:55 (5116): Guest Log:  *** Contents of shared directory: ***
2026-03-06 16:58:55 (5116): Guest Log: total 474420
2026-03-06 16:58:55 (5116): Guest Log: -rwxrwxrwx. 1 root root 274383804 Mar  6 11:38 ATLAS.root_0
2026-03-06 16:58:55 (5116): Guest Log: -rwxrwxrwx. 1 root root 209636654 Mar  6 13:58 HITS.pool.root.1
2026-03-06 16:58:55 (5116): Guest Log: -rwxrwxrwx. 1 root root      6197 Mar  6 11:38 init_data.xml
2026-03-06 16:58:55 (5116): Guest Log: -rwxrwxrwx. 1 root root    597949 Mar  3 20:19 input.tar.gz
2026-03-06 16:58:55 (5116): Guest Log: -rwxrwxrwx. 1 root root   1157120 Mar  6 13:58 result.tar.gz
2026-03-06 16:58:55 (5116): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  3 20:19 start_atlas.sh
2026-03-06 16:58:55 (5116): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-06 16:58:55 (5116): VM Completion File Detected.
2026-03-06 16:58:55 (5116): Powering off VM.
2026-03-06 16:58:55 (5116): Successfully stopped VM.
2026-03-06 16:58:55 (5116): Deregistering VM. (boinc_bb2216b89f2b29f2, slot#15)
2026-03-06 16:58:55 (5116): Removing network bandwidth throttle group from VM.
2026-03-06 16:58:56 (5116): Removing VM from VirtualBox.
2026-03-06 16:59:01 (5116): called boinc_finish(0)

</stderr_txt>
]]>

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