Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:25:07 (2294692): wrapper (7.7.26015): starting
11:25:07 (2294692): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 11:25:07] Arguments: --nthreads 4
[2026-03-04 11:25:07] Threads: 4
[2026-03-04 11:25:07] Checking for CVMFS
[2026-03-04 11:25:07] No cvmfs_config command found, will try listing directly
[2026-03-04 11:25:07] CVMFS is ok
[2026-03-04 11:25:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 11:25:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 11:25:07] Further information can be found at the LHC@home message board.
[2026-03-04 11:25:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 11:25:07] Checking for apptainer binary...
[2026-03-04 11:25:07] which: no apptainer in ((null))
[2026-03-04 11:25:07] apptainer is not installed, using version from CVMFS
[2026-03-04 11:25:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 11:25:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-04 11:25:07] apptainer works
[2026-03-04 11:25:07] Set ATHENA_PROC_NUMBER=4
[2026-03-04 11:25:07] Set ATHENA_CORE_NUMBER=4
[2026-03-04 11:25:07] Starting ATLAS job with PandaID=7036368650
[2026-03-04 11:25:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 12:50:38]  *** The last 200 lines of the pilot log: ***
[2026-03-04 12:50:38]  filetype=log
[2026-03-04 12:50:38]  guid=ee8ee02d-847f-4607-8da6-32d1240a35b0
[2026-03-04 12:50:38]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-04 12:50:38]  is_altstaged=None
[2026-03-04 12:50:38]  is_tar=False
[2026-03-04 12:50:38]  lfn=log.48700938._002637.job.log.tgz.1
[2026-03-04 12:50:38]  mtime=0
[2026-03-04 12:50:38]  protocol_id=None
[2026-03-04 12:50:38]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 12:50:38]  replicas=None
[2026-03-04 12:50:38]  scope=mc23_13p6TeV
[2026-03-04 12:50:38]  status=None
[2026-03-04 12:50:38]  status_code=0
[2026-03-04 12:50:38]  storage_token=
[2026-03-04 12:50:38]  surl=/scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036368650/log.48700938._002637.job.log.tgz.1
[2026-03-04 12:50:38]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/92/log.48700938._002637.job.log.tgz.1
[2026-03-04 12:50:38]  workdir=None
[2026-03-04 12:50:38] ]
[2026-03-04 12:50:38] 2026-03-04 11:49:46,208 | INFO     | transferring file log.48700938._002637.job.log.tgz.1 from /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036368650/log.48700938._002637.job.log.tgz.1 to /scratch/b
[2026-03-04 12:50:38] 2026-03-04 11:49:46,208 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036368650/log.48700938._002637.job.log.tgz.1 /scratch/boinc/var/slot88/slots/0/lo
[2026-03-04 12:50:38] 2026-03-04 11:49:46,232 | INFO     | adding to output.list: log.48700938._002637.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/72/92/log.48700938._002637.job.log.tg
[2026-03-04 12:50:38] 2026-03-04 11:49:46,233 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 12:50:38] 2026-03-04 11:49:46,233 | INFO     | summary of transferred files:
[2026-03-04 12:50:38] 2026-03-04 11:49:46,233 | INFO     |  -- lfn=log.48700938._002637.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 12:50:38] 2026-03-04 11:49:46,233 | INFO     | stage-out finished correctly
[2026-03-04 12:50:38] 2026-03-04 11:49:46,291 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 12:50:38] 2026-03-04 11:49:46,455 | INFO     | number of running child processes to parent process 2304020: 1
[2026-03-04 12:50:38] 2026-03-04 11:49:46,455 | INFO     | maximum number of monitored processes: 6
[2026-03-04 12:50:38] 2026-03-04 11:49:47,839 | INFO     | time since job start (5061s) is within the limit (349056.0s)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,849 | INFO     | job 7036368650 has state=finished
[2026-03-04 12:50:38] 2026-03-04 11:49:47,849 | INFO     | preparing for final server update for job 7036368650 in state='finished'
[2026-03-04 12:50:38] 2026-03-04 11:49:47,850 | INFO     | reading metadata from: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036368650/jobReport.json
[2026-03-04 12:50:38] 2026-03-04 11:49:47,852 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot88/slots/0/workernode_map.json
[2026-03-04 12:50:38] 2026-03-04 11:49:47,852 | INFO     | this job has now completed (state=finished)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,852 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,852 | INFO     | log transfer has been attempted: DONE
[2026-03-04 12:50:38] 2026-03-04 11:49:47,852 | INFO     | job 7036368650 has finished - writing final server update
[2026-03-04 12:50:38] 2026-03-04 11:49:47,853 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3022757/.job.ad'
[2026-03-04 12:50:38] 2026-03-04 11:49:47,853 | INFO     | total number of processed events: 400 (read)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,874 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036368650/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,874 | INFO     | extracted standard info from prmon json
[2026-03-04 12:50:38] 2026-03-04 11:49:47,875 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 12:50:38] 2026-03-04 11:49:47,875 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 12:50:38] 2026-03-04 11:49:47,875 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 12:50:38] 2026-03-04 11:49:47,875 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 12:50:38] 2026-03-04 11:49:47,877 | INFO     | fitting pss+swap vs Time
[2026-03-04 12:50:38] 2026-03-04 11:49:47,877 | INFO     | sum of square deviations: 136095575.0
[2026-03-04 12:50:38] 2026-03-04 11:49:47,877 | INFO     | sum of deviations: -4695107536.0
[2026-03-04 12:50:38] 2026-03-04 11:49:47,877 | INFO     | mean x: 1772622543.5
[2026-03-04 12:50:38] 2026-03-04 11:49:47,877 | INFO     | mean y: 2357685.4736842103
[2026-03-04 12:50:38] 2026-03-04 11:49:47,877 | INFO     | intersect: 61155363302.81531
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | chi2: 0.026355426477736355
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | current memory leak: -34.50 B/s (using 76 data points, chi2=0.03)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | could have reported an average CPU frequency of 2799 MHz (6 samples)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | ..............................
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | . Timing measurements:
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | . get job = 0 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | . initial setup = 7 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | . payload setup = 7 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,878 | INFO     | . stage-in = 0 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,879 | INFO     | . payload execution = 5036 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,879 | INFO     | . stage-out = 0 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,879 | INFO     | . log creation = 0 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,879 | INFO     | ..............................
[2026-03-04 12:50:38] 2026-03-04 11:49:47,960 | INFO     | 
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | job summary report
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | --------------------------------------------------
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | PanDA job id: 7036368650
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | task id: 48700938
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | errors: (none)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | pilot state: finished 
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | transexitcode: 0
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | exeerrorcode: 0
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | exeerrordiag: 
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | exitcode: 0
[2026-03-04 12:50:38] 2026-03-04 11:49:47,961 | INFO     | exitmsg: OK
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | cpuconsumptiontime: 19030 s
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | nevents: 400
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | neventsw: 0
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | pid: 2304020
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | pgrp: 2304020
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | corecount: 4
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | event service: False
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | sizes: {0: 2286509, 1: 2287026, 12: 2287026, 5047: 2313422, 5048: 2322498, 5050: 2322636}
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | --------------------------------------------------
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | 
[2026-03-04 12:50:38] 2026-03-04 11:49:47,962 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-03-04 12:50:38] 2026-03-04 11:49:47,984 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,984 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,984 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,986 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,986 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 12:50:38] 2026-03-04 11:49:47,986 | INFO     | job 7036368650 has completed (purged errors)
[2026-03-04 12:50:38] 2026-03-04 11:49:47,986 | INFO     | overall cleanup function is called
[2026-03-04 12:50:38] 2026-03-04 11:49:48,994 | INFO     | --- collectZombieJob: --- 10, [2304020]
[2026-03-04 12:50:38] 2026-03-04 11:49:48,995 | INFO     | zombie collector waiting for pid 2304020
[2026-03-04 12:50:38] 2026-03-04 11:49:48,995 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 12:50:38] 2026-03-04 11:49:48,995 | INFO     | collected zombie processes
[2026-03-04 12:50:38] 2026-03-04 11:49:48,995 | INFO     | will attempt to kill all subprocesses of pid=2304020
[2026-03-04 12:50:38] 2026-03-04 11:49:49,343 | INFO     | process IDs to be killed: [2304020] (in reverse order)
[2026-03-04 12:50:38] 2026-03-04 11:49:49,491 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 12:50:38] 2026-03-04 11:49:49,492 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 12:50:38] 2026-03-04 11:49:49,510 | INFO     | did not find any defunct processes belonging to 2304020
[2026-03-04 12:50:38] 2026-03-04 11:49:49,520 | INFO     | did not find any defunct processes belonging to 2304020
[2026-03-04 12:50:38] 2026-03-04 11:49:49,520 | INFO     | ready for new job
[2026-03-04 12:50:38] 2026-03-04 11:49:49,520 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 12:50:38] 2026-03-04 11:49:49,522 | INFO     | **************************************
[2026-03-04 12:50:38] 2026-03-04 11:49:49,522 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 12:50:38] 2026-03-04 11:49:49,522 | INFO     | **************************************
[2026-03-04 12:50:38] 2026-03-04 11:49:49,522 | INFO     | 
[2026-03-04 12:50:38] 2026-03-04 11:49:49,528 | INFO     | architecture information:
[2026-03-04 12:50:38] 2026-03-04 11:49:49,528 | INFO     | executing command: cat /etc/os-release
[2026-03-04 12:50:38] 2026-03-04 11:49:49,545 | INFO     | cat /etc/os-release:
[2026-03-04 12:50:38] NAME="CentOS Linux"
[2026-03-04 12:50:38] VERSION="7 (Core)"
[2026-03-04 12:50:38] ID="centos"
[2026-03-04 12:50:38] ID_LIKE="rhel fedora"
[2026-03-04 12:50:38] VERSION_ID="7"
[2026-03-04 12:50:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 12:50:38] ANSI_COLOR="0;31"
[2026-03-04 12:50:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 12:50:38] HOME_URL="https://www.centos.org/"
[2026-03-04 12:50:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 12:50:38] 
[2026-03-04 12:50:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 12:50:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 12:50:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 12:50:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 12:50:38] 
[2026-03-04 12:50:38] 2026-03-04 11:49:49,546 | INFO     | **************************************
[2026-03-04 12:50:38] 2026-03-04 11:49:50,049 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-03-04 12:50:38] 2026-03-04 11:49:50,068 | INFO     | sufficient remaining disk space (3317602189312 B)
[2026-03-04 12:50:38] 2026-03-04 11:49:50,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 12:50:38] 2026-03-04 11:49:50,068 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 12:50:38] 2026-03-04 11:49:50,068 | INFO     | update_server=False
[2026-03-04 12:50:38] 2026-03-04 11:49:50,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 12:50:38] 2026-03-04 11:49:50,069 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 12:50:38] 2026-03-04 11:49:50,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:50:38] 2026-03-04 11:49:50,069 | INFO     | aborting loop
[2026-03-04 12:50:38] 2026-03-04 11:49:50,456 | INFO     | all data control threads have been joined
[2026-03-04 12:50:38] 2026-03-04 11:49:50,814 | INFO     | all payload control threads have been joined
[2026-03-04 12:50:38] 2026-03-04 11:49:51,072 | INFO     | [job] job monitor thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:51,074 | INFO     | [job] retrieve thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:51,328 | INFO     | [payload] failed_post thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:51,437 | INFO     | all job control threads have been joined
[2026-03-04 12:50:38] 2026-03-04 11:49:51,452 | INFO     | [job] validate thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:51,462 | INFO     | [data] control thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:51,706 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:51,817 | INFO     | [payload] control thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:51,825 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:52,059 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:52,075 | INFO     | [data] copytool_out thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:52,224 | INFO     | [data] copytool_in thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:52,392 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 12:50:38] 2026-03-04 11:49:52,442 | INFO     | [job] control thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:52,556 | INFO     | [payload] validate_post thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:52,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:50:38] 2026-03-04 11:49:53,976 | INFO     | [job] queue monitor thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:49:56,398 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:50:00,818 | INFO     | job.realtimelogging is not enabled
[2026-03-04 12:50:38] 2026-03-04 11:50:01,823 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 12:50:38] 2026-03-04 11:50:21,355 | INFO     | PID=2299022 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 12:50:38] 2026-03-04 11:50:21,355 | INFO     | .. there are 17 such processes running
[2026-03-04 12:50:38] 2026-03-04 11:50:21,356 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 12:50:38] 2026-03-04 11:50:21,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 12:50:38] 2026-03-04 11:50:21,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 12:50:38] 2026-03-04 11:50:32,884 | INFO     | [monitor] cgroup control has ended
[2026-03-04 12:50:38] 2026-03-04 11:50:33,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22993831839552)>', '<ExcThread(monitor, started 22993595287296)>']
[2026-03-04 12:50:38] 2026-03-04 11:50:33,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 12:50:38] 2026-03-04 11:50:33,417 | INFO     | [monitor] control thread has ended
[2026-03-04 12:50:38] 2026-03-04 11:50:38,286 | INFO     | all workflow threads have been joined
[2026-03-04 12:50:38] 2026-03-04 11:50:38,286 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 12:50:38] 2026-03-04 11:50:38,286 | INFO     | traces error code: 0
[2026-03-04 12:50:38] 2026-03-04 11:50:38,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 12:50:38] 2026-03-04 11:50:38,372 [wrapper] ==== pilot stdout END ====
[2026-03-04 12:50:38] 2026-03-04 11:50:38,375 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 12:50:38] 2026-03-04 11:50:38,377 [wrapper] pilotpid: 2299022
[2026-03-04 12:50:38] 2026-03-04 11:50:38,380 [wrapper] Pilot exit status: 0
[2026-03-04 12:50:38] 2026-03-04 11:50:38,391 [wrapper] pandaids: 7036368650
[2026-03-04 12:50:38] 2026-03-04 11:50:38,474 [wrapper] cleanup supervisor_pilot 2473598 2299023
[2026-03-04 12:50:38] 2026-03-04 11:50:38,478 [wrapper] Test setup, not cleaning
[2026-03-04 12:50:38] 2026-03-04 11:50:38,480 [wrapper] apfmon messages muted
[2026-03-04 12:50:38] 2026-03-04 11:50:38,482 [wrapper] ==== wrapper stdout END ====
[2026-03-04 12:50:38] 2026-03-04 11:50:38,485 [wrapper] ==== wrapper stderr END ====
[2026-03-04 12:50:38]  *** Error codes and diagnostics ***
[2026-03-04 12:50:38]     "exeErrorCode": 0,
[2026-03-04 12:50:38]     "exeErrorDiag": "",
[2026-03-04 12:50:38]     "pilotErrorCode": 0,
[2026-03-04 12:50:38]     "pilotErrorDiag": "",
[2026-03-04 12:50:38]  *** Listing of results directory ***
[2026-03-04 12:50:38] total 338328
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc    584627 Mar  3 17:29 pilot3.tar.gz
[2026-03-04 12:50:38] -rwx------ 1 boinc boinc     36322 Mar  3 17:30 runpilot2-wrapper.sh
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc      5111 Mar  3 17:31 queuedata.json
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc       100 Mar  4 11:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 12:50:38] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 11:25 run_atlas
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc       105 Mar  4 11:25 job.xml
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc      6699 Mar  4 11:25 init_data.xml
[2026-03-04 12:50:38] -rw-r--r-- 2 boinc boinc 191524160 Mar  4 11:25 EVNT.48700936._000104.pool.root.1
[2026-03-04 12:50:38] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:25 start_atlas.sh
[2026-03-04 12:50:38] drwxrwx--x 2 boinc boinc      4096 Mar  4 11:25 shared
[2026-03-04 12:50:38] -rw-r--r-- 2 boinc boinc    597930 Mar  4 11:25 input.tar.gz
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc         0 Mar  4 11:25 boinc_lockfile
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc      2497 Mar  4 11:25 pandaJob.out
[2026-03-04 12:50:38] -rw------- 1 boinc boinc    997376 Mar  4 11:25 agis_schedconf.cvmfs.json
[2026-03-04 12:50:38] -rw------- 1 boinc boinc   1516092 Mar  4 11:25 agis_ddmendpoints.agis.ALL.json
[2026-03-04 12:50:38] -rw------- 1 boinc boinc       440 Mar  4 11:25 workernode_map.json
[2026-03-04 12:50:38] drwx------ 5 boinc boinc      4096 Mar  4 11:25 pilot3
[2026-03-04 12:50:38] -rw------- 1 boinc boinc 149020358 Mar  4 12:49 HITS.48700938._002637.pool.root.1
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc       529 Mar  4 12:49 boinc_task_state.xml
[2026-03-04 12:50:38] -rw------- 1 boinc boinc      1023 Mar  4 12:49 memory_monitor_summary.json
[2026-03-04 12:50:38] -rw------- 1 boinc boinc    254966 Mar  4 12:49 log.48700938._002637.job.log.tgz.1
[2026-03-04 12:50:38] -rw------- 1 boinc boinc      6338 Mar  4 12:49 heartbeat.json
[2026-03-04 12:50:38] -rw------- 1 boinc boinc        95 Mar  4 12:50 pilot_heartbeat.json
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc      8192 Mar  4 12:50 boinc_mmap_file
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc        27 Mar  4 12:50 wrapper_checkpoint.txt
[2026-03-04 12:50:38] -rw------- 1 boinc boinc      4903 Mar  4 12:50 pilotlog.txt
[2026-03-04 12:50:38] -rw------- 1 boinc boinc    732021 Mar  4 12:50 log.48700938._002637.job.log.1
[2026-03-04 12:50:38] -rw------- 1 boinc boinc       357 Mar  4 12:50 output.list
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc       620 Mar  4 12:50 runtime_log
[2026-03-04 12:50:38] -rw------- 1 boinc boinc   1003520 Mar  4 12:50 result.tar.gz
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc      9204 Mar  4 12:50 runtime_log.err
[2026-03-04 12:50:38] -rw------- 1 boinc boinc       661 Mar  4 12:50 COXMDm7ohH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDms4GLDm0qroJo.diag
[2026-03-04 12:50:38] -rw-r--r-- 1 boinc boinc     21107 Mar  4 12:50 stderr.txt
[2026-03-04 12:50:38] HITS file was successfully produced:
[2026-03-04 12:50:38] -rw------- 1 boinc boinc 149020358 Mar  4 12:49 shared/HITS.pool.root.1
[2026-03-04 12:50:38]  *** Contents of shared directory: ***
[2026-03-04 12:50:38] total 334152
[2026-03-04 12:50:38] -rw-r--r-- 2 boinc boinc 191524160 Mar  4 11:25 ATLAS.root_0
[2026-03-04 12:50:38] -rw-r--r-- 2 boinc boinc     15845 Mar  4 11:25 start_atlas.sh
[2026-03-04 12:50:38] -rw-r--r-- 2 boinc boinc    597930 Mar  4 11:25 input.tar.gz
[2026-03-04 12:50:38] -rw------- 1 boinc boinc 149020358 Mar  4 12:49 HITS.pool.root.1
[2026-03-04 12:50:38] -rw------- 1 boinc boinc   1003520 Mar  4 12:50 result.tar.gz
12:50:40 (2294692): run_atlas exited; CPU time 19258.891541
12:50:40 (2294692): called boinc_finish(0)

</stderr_txt>
]]>

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