Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:06:13 (6406): wrapper (7.7.26015): starting
06:06:13 (6406): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 06:06:13] Arguments: --nthreads 8
[2026-03-04 06:06:13] Threads: 8
[2026-03-04 06:06:13] Checking for CVMFS
[2026-03-04 06:06:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 06:06:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 06:06:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 06:06:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 06:06:17] 2.11.2.0 10325 112732 135168 156869 2 93 23648293 25165824 1088 130560 155 33064898 99.843 24533065 915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-04 06:06:17] CVMFS is ok
[2026-03-04 06:06:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 06:06:17] Checking for apptainer binary...
[2026-03-04 06:06:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 06:06:17] Running /usr/bin/apptainer --version
[2026-03-04 06:06:17] apptainer version 1.3.2-1.el7
[2026-03-04 06:06:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 06:06:30] cg-vwn405.simple-grid.lan
[2026-03-04 06:06:30] apptainer works
[2026-03-04 06:06:30] Set ATHENA_PROC_NUMBER=8
[2026-03-04 06:06:30] Set ATHENA_CORE_NUMBER=8
[2026-03-04 06:06:31] Starting ATLAS job with PandaID=7038493419
[2026-03-04 06:06:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 08:40:15]  *** The last 200 lines of the pilot log: ***
[2026-03-04 08:40:15] 2026-03-04 07:39:25,702 | INFO     | sum of square deviations: 832722590.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,703 | INFO     | sum of deviations: 47922277466.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,711 | INFO     | mean x: 1772605687.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,711 | INFO     | mean y: 2447811.1007194244
[2026-03-04 08:40:15] 2026-03-04 07:39:25,711 | INFO     | intersect: -102009077503.97874
[2026-03-04 08:40:15] 2026-03-04 07:39:25,711 | INFO     | chi2: 6.960750268684702
[2026-03-04 08:40:15] 2026-03-04 07:39:25,712 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 08:40:15] 2026-03-04 07:39:25,712 | INFO     | sum of deviations: 46727297988.5
[2026-03-04 08:40:15] 2026-03-04 07:39:25,713 | INFO     | mean x: 1772605534.5
[2026-03-04 08:40:15] 2026-03-04 07:39:25,713 | INFO     | mean y: 2445708.067164179
[2026-03-04 08:40:15] 2026-03-04 07:39:25,713 | INFO     | intersect: -111020855781.43391
[2026-03-04 08:40:15] 2026-03-04 07:39:25,713 | INFO     | chi2: 6.98661949672185
[2026-03-04 08:40:15] 2026-03-04 07:39:25,713 | INFO     | current chi2=6.98661949672185 (change=-0.371644248659933 %)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,713 | INFO     | right removable region: 133
[2026-03-04 08:40:15] 2026-03-04 07:39:25,714 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 08:40:15] 2026-03-04 07:39:25,715 | INFO     | sum of deviations: 215732569.5000043
[2026-03-04 08:40:15] 2026-03-04 07:39:25,715 | INFO     | mean x: 1772605839.5
[2026-03-04 08:40:15] 2026-03-04 07:39:25,715 | INFO     | mean y: 2531650.26119403
[2026-03-04 08:40:15] 2026-03-04 07:39:25,715 | INFO     | intersect: -510045521.0475447
[2026-03-04 08:40:15] 2026-03-04 07:39:25,715 | INFO     | chi2: 1.788673243638408
[2026-03-04 08:40:15] 2026-03-04 07:39:25,716 | INFO     | current chi2=1.788673243638408 (change=74.30344180446522 %)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,716 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,717 | INFO     | sum of deviations: -24550308697.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,717 | INFO     | mean x: 1772605992.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,717 | INFO     | mean y: 2578143.2635658914
[2026-03-04 08:40:15] 2026-03-04 07:39:25,717 | INFO     | intersect: 65382999348.334595
[2026-03-04 08:40:15] 2026-03-04 07:39:25,717 | INFO     | chi2: 0.17438715992134962
[2026-03-04 08:40:15] 2026-03-04 07:39:25,718 | INFO     | current chi2=0.17438715992134962 (change=90.25047416896437 %)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,718 | INFO     | sum of square deviations: 591173875.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,719 | INFO     | sum of deviations: -26341489242.5
[2026-03-04 08:40:15] 2026-03-04 07:39:25,719 | INFO     | mean x: 1772606144.5
[2026-03-04 08:40:15] 2026-03-04 07:39:25,719 | INFO     | mean y: 2581693.25
[2026-03-04 08:40:15] 2026-03-04 07:39:25,719 | INFO     | intersect: 78986257496.81313
[2026-03-04 08:40:15] 2026-03-04 07:39:25,719 | INFO     | chi2: 0.11905737253043767
[2026-03-04 08:40:15] 2026-03-04 07:39:25,720 | INFO     | current chi2=0.11905737253043767 (change=31.728131483915583 %)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,720 | INFO     | sum of square deviations: 522502820.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,721 | INFO     | sum of deviations: -23704037579.999996
[2026-03-04 08:40:15] 2026-03-04 07:39:25,721 | INFO     | mean x: 1772606297.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,721 | INFO     | mean y: 2575820.680672269
[2026-03-04 08:40:15] 2026-03-04 07:39:25,721 | INFO     | intersect: 80419225588.48984
[2026-03-04 08:40:15] 2026-03-04 07:39:25,721 | INFO     | chi2: 0.11856258507727735
[2026-03-04 08:40:15] 2026-03-04 07:39:25,722 | INFO     | current chi2=0.11856258507727735 (change=0.41558741188734877 %)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,722 | INFO     | left removable region: 40
[2026-03-04 08:40:15] 2026-03-04 07:39:25,722 | INFO     | sum of square deviations: 249388862.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,723 | INFO     | sum of deviations: -9412523076.999998
[2026-03-04 08:40:15] 2026-03-04 07:39:25,723 | INFO     | mean x: 1772606724.0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,723 | INFO     | mean y: 2539716.35483871
[2026-03-04 08:40:15] 2026-03-04 07:39:25,723 | INFO     | intersect: 66904892781.72697
[2026-03-04 08:40:15] 2026-03-04 07:39:25,723 | INFO     | chi2: 0.09706919317672108
[2026-03-04 08:40:15] 2026-03-04 07:39:25,724 | INFO     | current memory leak: -37.74 B/s (using 93 data points, chi2=0.10)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,724 | INFO     | could have reported an average CPU frequency of 1999 MHz (8 samples)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,724 | INFO     | ..............................
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . Timing measurements:
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . get job = 0 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . initial setup = 122 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . payload setup = 157 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . stage-in = 0 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . payload execution = 8623 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . stage-out = 3 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,725 | INFO     | . log creation = 1 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,726 | INFO     | ..............................
[2026-03-04 08:40:15] 2026-03-04 07:39:25,778 | INFO     | time since job start (8791s) is within the limit (349056.0s)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,868 | INFO     | 
[2026-03-04 08:40:15] 2026-03-04 07:39:25,868 | INFO     | job summary report
[2026-03-04 08:40:15] 2026-03-04 07:39:25,868 | INFO     | --------------------------------------------------
[2026-03-04 08:40:15] 2026-03-04 07:39:25,868 | INFO     | PanDA job id: 7038493419
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | task id: 48955010
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | errors: (none)
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | pilot state: finished 
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | transexitcode: 0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | exeerrorcode: 0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | exeerrordiag: 
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | exitcode: 0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,869 | INFO     | exitmsg: OK
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | cpuconsumptiontime: 50155 s
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | nevents: 400
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | neventsw: 0
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | pid: 14901
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | pgrp: 14901
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | corecount: 8
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | event service: False
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | sizes: {0: 2285972, 1: 2286657, 2: 2287118, 8785: 2315120, 8789: 2324118, 8790: 2324496}
[2026-03-04 08:40:15] 2026-03-04 07:39:25,870 | INFO     | --------------------------------------------------
[2026-03-04 08:40:15] 2026-03-04 07:39:25,871 | INFO     | 
[2026-03-04 08:40:15] 2026-03-04 07:39:25,871 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-04 08:40:15] 2026-03-04 07:39:26,395 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,395 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,395 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,395 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,396 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 08:40:15] 2026-03-04 07:39:26,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,397 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 08:40:15] 2026-03-04 07:39:26,397 | INFO     | job 7038493419 has completed (purged errors)
[2026-03-04 08:40:15] 2026-03-04 07:39:26,397 | INFO     | overall cleanup function is called
[2026-03-04 08:40:15] 2026-03-04 07:39:27,405 | INFO     | --- collectZombieJob: --- 10, [14901]
[2026-03-04 08:40:15] 2026-03-04 07:39:27,406 | INFO     | zombie collector waiting for pid 14901
[2026-03-04 08:40:15] 2026-03-04 07:39:27,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 08:40:15] 2026-03-04 07:39:27,406 | INFO     | collected zombie processes
[2026-03-04 08:40:15] 2026-03-04 07:39:27,406 | INFO     | will attempt to kill all subprocesses of pid=14901
[2026-03-04 08:40:15] 2026-03-04 07:39:27,491 | INFO     | process IDs to be killed: [14901] (in reverse order)
[2026-03-04 08:40:15] 2026-03-04 07:39:28,414 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 08:40:15] 2026-03-04 07:39:28,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 08:40:15] 2026-03-04 07:39:28,416 | INFO     | did not find any defunct processes belonging to 14901
[2026-03-04 08:40:15] 2026-03-04 07:39:28,418 | INFO     | did not find any defunct processes belonging to 14901
[2026-03-04 08:40:15] 2026-03-04 07:39:28,418 | INFO     | ready for new job
[2026-03-04 08:40:15] 2026-03-04 07:39:28,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 08:40:15] 2026-03-04 07:39:28,420 | INFO     | **************************************
[2026-03-04 08:40:15] 2026-03-04 07:39:28,420 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 08:40:15] 2026-03-04 07:39:28,421 | INFO     | **************************************
[2026-03-04 08:40:15] 2026-03-04 07:39:28,421 | INFO     | 
[2026-03-04 08:40:15] 2026-03-04 07:39:28,422 | INFO     | pilot is running in a VM
[2026-03-04 08:40:15] 2026-03-04 07:39:28,422 | INFO     | architecture information:
[2026-03-04 08:40:15] 2026-03-04 07:39:28,424 | INFO     | executing command: cat /etc/os-release
[2026-03-04 08:40:15] 2026-03-04 07:39:28,766 | INFO     | cat /etc/os-release:
[2026-03-04 08:40:15] NAME="CentOS Linux"
[2026-03-04 08:40:15] VERSION="7 (Core)"
[2026-03-04 08:40:15] ID="centos"
[2026-03-04 08:40:15] ID_LIKE="rhel fedora"
[2026-03-04 08:40:15] VERSION_ID="7"
[2026-03-04 08:40:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 08:40:15] ANSI_COLOR="0;31"
[2026-03-04 08:40:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 08:40:15] HOME_URL="https://www.centos.org/"
[2026-03-04 08:40:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 08:40:15] 
[2026-03-04 08:40:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 08:40:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 08:40:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 08:40:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 08:40:15] 
[2026-03-04 08:40:15] 2026-03-04 07:39:28,766 | INFO     | **************************************
[2026-03-04 08:40:15] 2026-03-04 07:39:29,270 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-04 08:40:15] 2026-03-04 07:39:29,498 | INFO     | sufficient remaining disk space (497140367360 B)
[2026-03-04 08:40:15] 2026-03-04 07:39:29,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 08:40:15] 2026-03-04 07:39:29,499 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 08:40:15] 2026-03-04 07:39:29,499 | INFO     | update_server=False
[2026-03-04 08:40:15] 2026-03-04 07:39:29,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 08:40:15] 2026-03-04 07:39:29,696 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 08:40:15] 2026-03-04 07:39:29,697 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 08:40:15] 2026-03-04 07:39:29,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:40:15] 2026-03-04 07:39:29,697 | INFO     | will abort loop
[2026-03-04 08:40:15] 2026-03-04 07:39:30,251 | INFO     | all data control threads have been joined
[2026-03-04 08:40:15] 2026-03-04 07:39:30,355 | INFO     | all payload control threads have been joined
[2026-03-04 08:40:15] 2026-03-04 07:39:30,506 | INFO     | [job] retrieve thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:30,622 | INFO     | all job control threads have been joined
[2026-03-04 08:40:15] 2026-03-04 07:39:30,663 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:30,689 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 08:40:15] 2026-03-04 07:39:30,703 | INFO     | [job] job monitor thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:30,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:40:15] 2026-03-04 07:39:30,905 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:30,931 | INFO     | [job] validate thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:30,967 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,257 | INFO     | [data] control thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,332 | INFO     | [payload] validate_post thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,361 | INFO     | [payload] control thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,451 | INFO     | [payload] failed_post thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,628 | INFO     | [job] control thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 08:40:15] 2026-03-04 07:39:31,807 | INFO     | [data] copytool_in thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,888 | INFO     | [job] queue monitor thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:31,979 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:32,696 | INFO     | [data] copytool_out thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:35,717 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 08:40:15] 2026-03-04 07:39:58,946 | INFO     | PID=10429 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 08:40:15] 2026-03-04 07:39:58,947 | INFO     | .. there are 2 such processes running
[2026-03-04 08:40:15] 2026-03-04 07:39:58,947 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 08:40:15] 2026-03-04 07:39:58,947 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 08:40:15] 2026-03-04 07:39:58,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 08:40:15] 2026-03-04 07:40:07,550 | INFO     | [monitor] cgroup control has ended
[2026-03-04 08:40:15] 2026-03-04 07:40:08,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140448120473408)>', '<ExcThread(monitor, started 140447167014656)>']
[2026-03-04 08:40:15] 2026-03-04 07:40:09,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 08:40:15] 2026-03-04 07:40:09,008 | INFO     | [monitor] control thread has ended
[2026-03-04 08:40:15] 2026-03-04 07:40:13,129 | INFO     | all workflow threads have been joined
[2026-03-04 08:40:15] 2026-03-04 07:40:13,130 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 08:40:15] 2026-03-04 07:40:13,130 | INFO     | traces error code: 0
[2026-03-04 08:40:15] 2026-03-04 07:40:13,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 08:40:15] 2026-03-04 07:40:13,510 [wrapper] ==== pilot stdout END ====
[2026-03-04 08:40:15] 2026-03-04 07:40:13,517 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 08:40:15] 2026-03-04 07:40:13,520 [wrapper] pilotpid: 10429
[2026-03-04 08:40:15] 2026-03-04 07:40:13,522 [wrapper] Pilot exit status: 0
[2026-03-04 08:40:15] 2026-03-04 07:40:14,121 [wrapper] pandaids: 7038493419
[2026-03-04 08:40:15] 2026-03-04 07:40:14,690 [wrapper] cleanup supervisor_pilot  4214 10430
[2026-03-04 08:40:15] 2026-03-04 07:40:14,751 [wrapper] Test setup, not cleaning
[2026-03-04 08:40:15] 2026-03-04 07:40:14,810 [wrapper] apfmon messages muted
[2026-03-04 08:40:15] 2026-03-04 07:40:14,837 [wrapper] ==== wrapper stdout END ====
[2026-03-04 08:40:15] 2026-03-04 07:40:14,849 [wrapper] ==== wrapper stderr END ====
[2026-03-04 08:40:15]  *** Error codes and diagnostics ***
[2026-03-04 08:40:15]     "exeErrorCode": 0,
[2026-03-04 08:40:15]     "exeErrorDiag": "",
[2026-03-04 08:40:15]     "pilotErrorCode": 0,
[2026-03-04 08:40:15]     "pilotErrorDiag": "",
[2026-03-04 08:40:15]  *** Listing of results directory ***
[2026-03-04 08:40:15] total 609816
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-04 08:40:15] -rwx------. 1 boinc boinc     36322 Mar  3 14:56 runpilot2-wrapper.sh
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc      5111 Mar  3 14:58 queuedata.json
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc       100 Mar  4 06:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 08:40:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 06:06 run_atlas
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc       105 Mar  4 06:06 job.xml
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc      6391 Mar  4 06:06 init_data.xml
[2026-03-04 08:40:15] -rw-r--r--. 2 boinc boinc 434138180 Mar  4 06:06 EVNT.46701403._001017.pool.root.1
[2026-03-04 08:40:15] -rw-r--r--. 2 boinc boinc     15845 Mar  4 06:06 start_atlas.sh
[2026-03-04 08:40:15] drwxrwx--x. 2 boinc boinc        68 Mar  4 06:06 shared
[2026-03-04 08:40:15] -rw-r--r--. 2 boinc boinc    597944 Mar  4 06:06 input.tar.gz
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc         0 Mar  4 06:06 boinc_lockfile
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc      2561 Mar  4 06:06 pandaJob.out
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc   1516092 Mar  4 06:10 agis_ddmendpoints.agis.ALL.json
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc       415 Mar  4 06:12 workernode_map.json
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc    997749 Mar  4 06:12 agis_schedconf.cvmfs.json
[2026-03-04 08:40:15] drwx------. 5 boinc boinc      4096 Mar  4 06:12 pilot3
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc 183036980 Mar  4 08:38 HITS.48955010._000844.pool.root.1
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc       530 Mar  4 08:38 boinc_task_state.xml
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc        95 Mar  4 08:39 pilot_heartbeat.json
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc      1021 Mar  4 08:39 memory_monitor_summary.json
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc    418250 Mar  4 08:39 log.48955010._000844.job.log.tgz.1
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc      6330 Mar  4 08:39 heartbeat.json
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc      8192 Mar  4 08:40 boinc_mmap_file
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc        27 Mar  4 08:40 wrapper_checkpoint.txt
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc      5066 Mar  4 08:40 pilotlog.txt
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc   1260556 Mar  4 08:40 log.48955010._000844.job.log.1
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc       357 Mar  4 08:40 output.list
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc       620 Mar  4 08:40 runtime_log
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc   1699840 Mar  4 08:40 result.tar.gz
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc      8815 Mar  4 08:40 runtime_log.err
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc       653 Mar  4 08:40 fooLDmYPfH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmemELDmf3Mk7m.diag
[2026-03-04 08:40:15] -rw-r--r--. 1 boinc boinc     20584 Mar  4 08:40 stderr.txt
[2026-03-04 08:40:15] HITS file was successfully produced:
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc 183036980 Mar  4 08:38 shared/HITS.pool.root.1
[2026-03-04 08:40:15]  *** Contents of shared directory: ***
[2026-03-04 08:40:15] total 604972
[2026-03-04 08:40:15] -rw-r--r--. 2 boinc boinc 434138180 Mar  4 06:06 ATLAS.root_0
[2026-03-04 08:40:15] -rw-r--r--. 2 boinc boinc     15845 Mar  4 06:06 start_atlas.sh
[2026-03-04 08:40:15] -rw-r--r--. 2 boinc boinc    597944 Mar  4 06:06 input.tar.gz
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc 183036980 Mar  4 08:38 HITS.pool.root.1
[2026-03-04 08:40:15] -rw-------. 1 boinc boinc   1699840 Mar  4 08:40 result.tar.gz
08:40:17 (6406): run_atlas exited; CPU time 50245.919385
08:40:17 (6406): called boinc_finish(0)

</stderr_txt>
]]>

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