Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:46:33 (1634526): wrapper (7.7.26015): starting
08:46:33 (1634526): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 08:46:33] Arguments: --nthreads 4
[2026-03-04 08:46:33] Threads: 4
[2026-03-04 08:46:33] Checking for CVMFS
[2026-03-04 08:46:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 08:46:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 08:46:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 08:46:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 08:46:34] 2.9.2.0 79673 9573 101752 156874 0 50 28532232 36864001 0 130560 0 4051892 99.982 372353 9658 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-04 08:46:34] CVMFS is ok
[2026-03-04 08:46:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 08:46:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 08:46:34] Further information can be found at the LHC@home message board.
[2026-03-04 08:46:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 08:46:34] Checking for apptainer binary...
[2026-03-04 08:46:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 08:46:34] Running /usr/bin/apptainer --version
[2026-03-04 08:46:34] apptainer version 1.4.1-1.1
[2026-03-04 08:46:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 08:46:34] thA309
[2026-03-04 08:46:34] apptainer works
[2026-03-04 08:46:34] Set ATHENA_PROC_NUMBER=4
[2026-03-04 08:46:34] Set ATHENA_CORE_NUMBER=4
[2026-03-04 08:46:34] Starting ATLAS job with PandaID=7036368021
[2026-03-04 08:46:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 09:46:58]  *** The last 200 lines of the pilot log: ***
[2026-03-04 09:46:58] 2026-03-04 08:46:12,778 | INFO     | all data control threads have been joined
[2026-03-04 09:46:58] 2026-03-04 08:46:12,956 | INFO     | [job] queue monitor thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:12,957 | INFO     | [job] retrieve thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:12,971 | INFO     | [payload] validate_post thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:12,994 | INFO     | [data] copytool_in thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:13,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 09:46:58] 2026-03-04 08:46:13,233 | INFO     | [payload] failed_post thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:13,365 | INFO     | [job] job monitor thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:13,454 | INFO     | all payload control threads have been joined
[2026-03-04 09:46:58] 2026-03-04 08:46:13,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 09:46:58] 2026-03-04 08:46:13,604 | INFO     | all job control threads have been joined
[2026-03-04 09:46:58] 2026-03-04 08:46:13,784 | INFO     | [data] control thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:14,139 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:14,172 | INFO     | [job] validate thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:14,314 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:14,378 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:14,460 | INFO     | [payload] control thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:14,610 | INFO     | [job] control thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:15,042 | INFO     | [data] copytool_out thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:17,574 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:22,044 | INFO     | job.realtimelogging is not enabled
[2026-03-04 09:46:58] 2026-03-04 08:46:23,049 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 09:46:58] 2026-03-04 08:46:41,510 | INFO     | PID=1638677 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 09:46:58] 2026-03-04 08:46:41,510 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 09:46:58] 2026-03-04 08:46:41,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 09:46:58] 2026-03-04 08:46:41,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 09:46:58] 2026-03-04 08:46:41,855 [wrapper] supervise_pilot (15 min periods counter: 5)
[2026-03-04 09:46:58] 2026-03-04 08:46:51,342 | INFO     | [monitor] cgroup control has ended
[2026-03-04 09:46:58] 2026-03-04 08:46:53,314 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139896643049280)>', '<ExcThread(monitor, started 139895842518784)>']
[2026-03-04 09:46:58] 2026-03-04 08:46:53,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 09:46:58] 2026-03-04 08:46:53,575 | INFO     | [monitor] control thread has ended
[2026-03-04 09:46:58] 2026-03-04 08:46:58,340 | INFO     | all workflow threads have been joined
[2026-03-04 09:46:58] 2026-03-04 08:46:58,340 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 09:46:58] 2026-03-04 08:46:58,340 | INFO     | traces error code: 0
[2026-03-04 09:46:58] 2026-03-04 08:46:58,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 09:46:58] 2026-03-04 08:46:58,423 [wrapper] ==== pilot stdout END ====
[2026-03-04 09:46:58] 2026-03-04 08:46:58,427 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 09:46:58] 2026-03-04 08:46:58,431 [wrapper] pilotpid: 1638677
[2026-03-04 09:46:58] 2026-03-04 08:46:58,436 [wrapper] Pilot exit status: 0
[2026-03-04 09:46:58] 2026-03-04 08:46:58,448 [wrapper] pandaids: 7036368021
[2026-03-04 09:46:58] 2026-03-04 08:46:58,472 [wrapper] cleanup supervisor_pilot 1649469 1638678
[2026-03-04 09:46:58] 2026-03-04 08:46:58,476 [wrapper] Test setup, not cleaning
[2026-03-04 09:46:58] 2026-03-04 08:46:58,480 [wrapper] apfmon messages muted
[2026-03-04 09:46:58] 2026-03-04 08:46:58,484 [wrapper] ==== wrapper stdout END ====
[2026-03-04 09:46:58] 2026-03-04 08:46:58,488 [wrapper] ==== wrapper stderr END ====
[2026-03-04 09:46:58]  *** Error codes and diagnostics ***
[2026-03-04 09:46:58]     "exeErrorCode": 0,
[2026-03-04 09:46:58]     "exeErrorDiag": "",
[2026-03-04 09:46:58]     "pilotErrorCode": 0,
[2026-03-04 09:46:58]     "pilotErrorDiag": "",
[2026-03-04 09:46:58]  *** Listing of results directory ***
[2026-03-04 09:46:58] total 341928
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc      5111 Mar  3 17:29 queuedata.json
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc    584627 Mar  3 17:29 pilot3.tar.gz
[2026-03-04 09:46:58] -rwx------ 1 boinc boinc     36322 Mar  3 17:30 runpilot2-wrapper.sh
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc       100 Mar  4 08:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 09:46:58] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 08:46 run_atlas
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc       105 Mar  4 08:46 job.xml
[2026-03-04 09:46:58] -rw-r--r-- 2 boinc boinc 190874646 Mar  4 08:46 EVNT.48700856._000103.pool.root.1
[2026-03-04 09:46:58] -rw-r--r-- 2 boinc boinc    597943 Mar  4 08:46 input.tar.gz
[2026-03-04 09:46:58] -rw-r--r-- 2 boinc boinc     15845 Mar  4 08:46 start_atlas.sh
[2026-03-04 09:46:58] drwxrwx--x 2 boinc boinc      4096 Mar  4 08:46 shared
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc         0 Mar  4 08:46 boinc_setup_complete
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc      6378 Mar  4 08:46 init_data.xml
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc         0 Mar  4 08:46 boinc_lockfile
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc      2521 Mar  4 08:46 pandaJob.out
[2026-03-04 09:46:58] -rw------- 1 boinc boinc    997360 Mar  4 08:46 agis_schedconf.cvmfs.json
[2026-03-04 09:46:58] -rw------- 1 boinc boinc   1516092 Mar  4 08:46 agis_ddmendpoints.agis.ALL.json
[2026-03-04 09:46:58] -rw------- 1 boinc boinc       426 Mar  4 08:46 workernode_map.json
[2026-03-04 09:46:58] drwx------ 5 boinc boinc      4096 Mar  4 08:46 pilot3
[2026-03-04 09:46:58] -rw------- 1 boinc boinc 153788761 Mar  4 09:45 HITS.48700858._002592.pool.root.1
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc       529 Mar  4 09:45 boinc_task_state.xml
[2026-03-04 09:46:58] -rw------- 1 boinc boinc        95 Mar  4 09:46 pilot_heartbeat.json
[2026-03-04 09:46:58] -rw------- 1 boinc boinc      1022 Mar  4 09:46 memory_monitor_summary.json
[2026-03-04 09:46:58] -rw------- 1 boinc boinc    242080 Mar  4 09:46 log.48700858._002592.job.log.tgz.1
[2026-03-04 09:46:58] -rw------- 1 boinc boinc      6307 Mar  4 09:46 heartbeat.json
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc      8192 Mar  4 09:46 boinc_mmap_file
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc        27 Mar  4 09:46 wrapper_checkpoint.txt
[2026-03-04 09:46:58] -rw------- 1 boinc boinc      5006 Mar  4 09:46 pilotlog.txt
[2026-03-04 09:46:58] -rw------- 1 boinc boinc    536131 Mar  4 09:46 log.48700858._002592.job.log.1
[2026-03-04 09:46:58] -rw------- 1 boinc boinc       357 Mar  4 09:46 output.list
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc       620 Mar  4 09:46 runtime_log
[2026-03-04 09:46:58] -rw------- 1 boinc boinc    798720 Mar  4 09:46 result.tar.gz
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc      8896 Mar  4 09:46 runtime_log.err
[2026-03-04 09:46:58] -rw------- 1 boinc boinc       657 Mar  4 09:46 G5dKDmqohH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfuELDmFu1Pvn.diag
[2026-03-04 09:46:58] -rw-r--r-- 1 boinc boinc      7059 Mar  4 09:46 stderr.txt
[2026-03-04 09:46:58] HITS file was successfully produced:
[2026-03-04 09:46:58] -rw------- 1 boinc boinc 153788761 Mar  4 09:45 shared/HITS.pool.root.1
[2026-03-04 09:46:58]  *** Contents of shared directory: ***
[2026-03-04 09:46:58] total 337972
[2026-03-04 09:46:58] -rw-r--r-- 2 boinc boinc 190874646 Mar  4 08:46 ATLAS.root_0
[2026-03-04 09:46:58] -rw-r--r-- 2 boinc boinc    597943 Mar  4 08:46 input.tar.gz
[2026-03-04 09:46:58] -rw-r--r-- 2 boinc boinc     15845 Mar  4 08:46 start_atlas.sh
[2026-03-04 09:46:58] -rw------- 1 boinc boinc 153788761 Mar  4 09:45 HITS.pool.root.1
[2026-03-04 09:46:58] -rw------- 1 boinc boinc    798720 Mar  4 09:46 result.tar.gz
09:47:00 (1634526): run_atlas exited; CPU time 13225.277601
09:47:00 (1634526): called boinc_finish(0)

</stderr_txt>
]]>

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