Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:15:29 (1976029): wrapper (7.7.26015): starting
06:15:29 (1976029): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 06:15:29] Arguments: --nthreads 4
[2026-03-04 06:15:29] Threads: 4
[2026-03-04 06:15:29] Checking for CVMFS
[2026-03-04 06:15:29] No cvmfs_config command found, will try listing directly
[2026-03-04 06:15:29] CVMFS is ok
[2026-03-04 06:15:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 06:15:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 06:15:29] Further information can be found at the LHC@home message board.
[2026-03-04 06:15:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 06:15:29] Checking for apptainer binary...
[2026-03-04 06:15:29] which: no apptainer in ((null))
[2026-03-04 06:15:29] apptainer is not installed, using version from CVMFS
[2026-03-04 06:15:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 06:15:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-04 06:15:29] apptainer works
[2026-03-04 06:15:29] Set ATHENA_PROC_NUMBER=4
[2026-03-04 06:15:29] Set ATHENA_CORE_NUMBER=4
[2026-03-04 06:15:29] Starting ATLAS job with PandaID=7036367996
[2026-03-04 06:15:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 08:24:00]  *** The last 200 lines of the pilot log: ***
[2026-03-04 08:24:00] 2026-03-04 07:22:59,264 | INFO     | job 7036367996 has state=finished
[2026-03-04 08:24:00] 2026-03-04 07:22:59,264 | INFO     | preparing for final server update for job 7036367996 in state='finished'
[2026-03-04 08:24:00] 2026-03-04 07:22:59,264 | INFO     | reading metadata from: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7036367996/jobReport.json
[2026-03-04 08:24:00] 2026-03-04 07:22:59,267 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot20/slots/0/workernode_map.json
[2026-03-04 08:24:00] 2026-03-04 07:22:59,267 | INFO     | this job has now completed (state=finished)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,267 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,268 | INFO     | log transfer has been attempted: DONE
[2026-03-04 08:24:00] 2026-03-04 07:22:59,268 | INFO     | job 7036367996 has finished - writing final server update
[2026-03-04 08:24:00] 2026-03-04 07:22:59,268 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_621586/.job.ad'
[2026-03-04 08:24:00] 2026-03-04 07:22:59,268 | INFO     | total number of processed events: 400 (read)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,280 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7036367996/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,281 | INFO     | extracted standard info from prmon json
[2026-03-04 08:24:00] 2026-03-04 07:22:59,281 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 08:24:00] 2026-03-04 07:22:59,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 08:24:00] 2026-03-04 07:22:59,281 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 08:24:00] 2026-03-04 07:22:59,281 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 08:24:00] 2026-03-04 07:22:59,284 | INFO     | fitting pss+swap vs Time
[2026-03-04 08:24:00] 2026-03-04 07:22:59,284 | INFO     | sum of square deviations: 605592750.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,285 | INFO     | sum of deviations: -1770750456.0000038
[2026-03-04 08:24:00] 2026-03-04 07:22:59,285 | INFO     | mean x: 1772605146.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,285 | INFO     | mean y: 2360862.392
[2026-03-04 08:24:00] 2026-03-04 07:22:59,285 | INFO     | intersect: 5185450274.521609
[2026-03-04 08:24:00] 2026-03-04 07:22:59,285 | INFO     | chi2: 1.3653451101588463
[2026-03-04 08:24:00] 2026-03-04 07:22:59,286 | INFO     | sum of square deviations: 535786790.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,286 | INFO     | sum of deviations: -1162251757.4999976
[2026-03-04 08:24:00] 2026-03-04 07:22:59,286 | INFO     | mean x: 1772604993.5
[2026-03-04 08:24:00] 2026-03-04 07:22:59,286 | INFO     | mean y: 2362192.4583333335
[2026-03-04 08:24:00] 2026-03-04 07:22:59,286 | INFO     | intersect: 3847573212.029471
[2026-03-04 08:24:00] 2026-03-04 07:22:59,287 | INFO     | chi2: 1.3668438076742668
[2026-03-04 08:24:00] 2026-03-04 07:22:59,287 | INFO     | current chi2=1.3668438076742668 (change=-0.1097669376240101 %)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,287 | INFO     | right removable region: 119
[2026-03-04 08:24:00] 2026-03-04 07:22:59,287 | INFO     | sum of square deviations: 535786790.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,288 | INFO     | sum of deviations: -17470179790.000004
[2026-03-04 08:24:00] 2026-03-04 07:22:59,288 | INFO     | mean x: 1772605298.5
[2026-03-04 08:24:00] 2026-03-04 07:22:59,288 | INFO     | mean y: 2394445.5833333335
[2026-03-04 08:24:00] 2026-03-04 07:22:59,288 | INFO     | intersect: 57801007325.721016
[2026-03-04 08:24:00] 2026-03-04 07:22:59,288 | INFO     | chi2: 0.031060707543972964
[2026-03-04 08:24:00] 2026-03-04 07:22:59,288 | INFO     | current chi2=0.031060707543972964 (change=97.72506545686758 %)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,288 | INFO     | sum of square deviations: 471562330.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,289 | INFO     | sum of deviations: -15855193749.000002
[2026-03-04 08:24:00] 2026-03-04 07:22:59,289 | INFO     | mean x: 1772605451.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,289 | INFO     | mean y: 2390597.0608695652
[2026-03-04 08:24:00] 2026-03-04 07:22:59,289 | INFO     | intersect: 59602153084.744156
[2026-03-04 08:24:00] 2026-03-04 07:22:59,290 | INFO     | chi2: 0.030330209981389713
[2026-03-04 08:24:00] 2026-03-04 07:22:59,290 | INFO     | current chi2=0.030330209981389713 (change=2.3518381271549527 %)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,290 | INFO     | left removable region: 20
[2026-03-04 08:24:00] 2026-03-04 07:22:59,290 | INFO     | sum of square deviations: 300842850.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,290 | INFO     | sum of deviations: -10838008287.000002
[2026-03-04 08:24:00] 2026-03-04 07:22:59,290 | INFO     | mean x: 1772605573.0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,291 | INFO     | mean y: 2382660.1919191917
[2026-03-04 08:24:00] 2026-03-04 07:22:59,291 | INFO     | intersect: 63861350522.50404
[2026-03-04 08:24:00] 2026-03-04 07:22:59,291 | INFO     | chi2: 0.02678391144757078
[2026-03-04 08:24:00] 2026-03-04 07:22:59,291 | INFO     | current memory leak: -36.03 B/s (using 99 data points, chi2=0.03)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,291 | INFO     | could have reported an average CPU frequency of 2703 MHz (8 samples)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | ..............................
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . Timing measurements:
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . get job = 0 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . initial setup = 5 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . payload setup = 5 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . stage-in = 0 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . payload execution = 7613 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . stage-out = 0 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | . log creation = 0 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,292 | INFO     | ..............................
[2026-03-04 08:24:00] 2026-03-04 07:22:59,383 | INFO     | 
[2026-03-04 08:24:00] 2026-03-04 07:22:59,383 | INFO     | job summary report
[2026-03-04 08:24:00] 2026-03-04 07:22:59,383 | INFO     | --------------------------------------------------
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | PanDA job id: 7036367996
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | task id: 48700858
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | errors: (none)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | pilot state: finished 
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | transexitcode: 0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | exeerrorcode: 0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | exeerrordiag: 
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | exitcode: 0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | exitmsg: OK
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | cpuconsumptiontime: 29168 s
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | nevents: 400
[2026-03-04 08:24:00] 2026-03-04 07:22:59,384 | INFO     | neventsw: 0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | pid: 1984725
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | pgrp: 1984725
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | corecount: 4
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | event service: False
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | sizes: {0: 2286544, 1: 2287005, 11: 2287005, 7622: 2314541, 7623: 2314540, 7624: 2323800, 7625: 2324094}
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | --------------------------------------------------
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | 
[2026-03-04 08:24:00] 2026-03-04 07:22:59,385 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-03-04 08:24:00] 2026-03-04 07:22:59,404 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 08:24:00] 2026-03-04 07:22:59,406 | INFO     | job 7036367996 has completed (purged errors)
[2026-03-04 08:24:00] 2026-03-04 07:22:59,407 | INFO     | overall cleanup function is called
[2026-03-04 08:24:00] 2026-03-04 07:23:00,411 | INFO     | --- collectZombieJob: --- 10, [1984725]
[2026-03-04 08:24:00] 2026-03-04 07:23:00,411 | INFO     | zombie collector waiting for pid 1984725
[2026-03-04 08:24:00] 2026-03-04 07:23:00,412 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 08:24:00] 2026-03-04 07:23:00,412 | INFO     | collected zombie processes
[2026-03-04 08:24:00] 2026-03-04 07:23:00,412 | INFO     | will attempt to kill all subprocesses of pid=1984725
[2026-03-04 08:24:00] 2026-03-04 07:23:00,706 | INFO     | process IDs to be killed: [1984725] (in reverse order)
[2026-03-04 08:24:00] 2026-03-04 07:23:00,805 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 08:24:00] 2026-03-04 07:23:00,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 08:24:00] 2026-03-04 07:23:00,814 | INFO     | did not find any defunct processes belonging to 1984725
[2026-03-04 08:24:00] 2026-03-04 07:23:00,822 | INFO     | did not find any defunct processes belonging to 1984725
[2026-03-04 08:24:00] 2026-03-04 07:23:00,823 | INFO     | ready for new job
[2026-03-04 08:24:00] 2026-03-04 07:23:00,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 08:24:00] 2026-03-04 07:23:00,825 | INFO     | **************************************
[2026-03-04 08:24:00] 2026-03-04 07:23:00,825 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 08:24:00] 2026-03-04 07:23:00,825 | INFO     | **************************************
[2026-03-04 08:24:00] 2026-03-04 07:23:00,825 | INFO     | 
[2026-03-04 08:24:00] 2026-03-04 07:23:00,829 | INFO     | architecture information:
[2026-03-04 08:24:00] 2026-03-04 07:23:00,829 | INFO     | executing command: cat /etc/os-release
[2026-03-04 08:24:00] 2026-03-04 07:23:00,845 | INFO     | cat /etc/os-release:
[2026-03-04 08:24:00] NAME="CentOS Linux"
[2026-03-04 08:24:00] VERSION="7 (Core)"
[2026-03-04 08:24:00] ID="centos"
[2026-03-04 08:24:00] ID_LIKE="rhel fedora"
[2026-03-04 08:24:00] VERSION_ID="7"
[2026-03-04 08:24:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 08:24:00] ANSI_COLOR="0;31"
[2026-03-04 08:24:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 08:24:00] HOME_URL="https://www.centos.org/"
[2026-03-04 08:24:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 08:24:00] 
[2026-03-04 08:24:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 08:24:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 08:24:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 08:24:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 08:24:00] 
[2026-03-04 08:24:00] 2026-03-04 07:23:00,846 | INFO     | **************************************
[2026-03-04 08:24:00] 2026-03-04 07:23:01,349 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-03-04 08:24:00] 2026-03-04 07:23:01,366 | INFO     | sufficient remaining disk space (668309913600 B)
[2026-03-04 08:24:00] 2026-03-04 07:23:01,366 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 08:24:00] 2026-03-04 07:23:01,367 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 08:24:00] 2026-03-04 07:23:01,367 | INFO     | update_server=False
[2026-03-04 08:24:00] 2026-03-04 07:23:01,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 08:24:00] 2026-03-04 07:23:01,367 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:24:00] 2026-03-04 07:23:01,367 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 08:24:00] 2026-03-04 07:23:01,518 | INFO     | all payload control threads have been joined
[2026-03-04 08:24:00] 2026-03-04 07:23:01,705 | INFO     | all data control threads have been joined
[2026-03-04 08:24:00] 2026-03-04 07:23:02,224 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:24:00] 2026-03-04 07:23:02,224 | INFO     | aborting loop
[2026-03-04 08:24:00] 2026-03-04 07:23:02,372 | INFO     | [job] retrieve thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:02,373 | INFO     | [job] queue monitor thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:02,403 | INFO     | [data] copytool_in thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:02,523 | INFO     | [payload] control thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:02,710 | INFO     | [data] control thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:02,756 | INFO     | job.realtimelogging is not enabled
[2026-03-04 08:24:00] 2026-03-04 07:23:02,760 | INFO     | [payload] validate_post thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:02,934 | INFO     | all job control threads have been joined
[2026-03-04 08:24:00] 2026-03-04 07:23:03,115 | INFO     | [job] validate thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,230 | INFO     | [job] job monitor thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,288 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,319 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,373 | INFO     | [data] copytool_out thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,505 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,761 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,805 | INFO     | [payload] failed_post thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:03,940 | INFO     | [job] control thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:04,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 08:24:00] 2026-03-04 07:23:08,128 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 08:24:00] 2026-03-04 07:23:31,876 | INFO     | PID=1979850 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 08:24:00] 2026-03-04 07:23:31,877 | INFO     | .. there are 12 such processes running
[2026-03-04 08:24:00] 2026-03-04 07:23:31,878 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 08:24:00] 2026-03-04 07:23:31,878 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 08:24:00] 2026-03-04 07:23:31,878 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 08:24:00] 2026-03-04 07:23:54,304 | INFO     | [monitor] cgroup control has ended
[2026-03-04 08:24:00] 2026-03-04 07:23:54,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23168519362368)>', '<ExcThread(monitor, started 23168271247104)>']
[2026-03-04 08:24:00] 2026-03-04 07:23:54,992 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 08:24:00] 2026-03-04 07:23:54,992 | INFO     | [monitor] control thread has ended
[2026-03-04 08:24:00] 2026-03-04 07:23:59,779 | INFO     | all workflow threads have been joined
[2026-03-04 08:24:00] 2026-03-04 07:23:59,779 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 08:24:00] 2026-03-04 07:23:59,779 | INFO     | traces error code: 0
[2026-03-04 08:24:00] 2026-03-04 07:23:59,779 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 08:24:00] 2026-03-04 07:23:59,920 [wrapper] ==== pilot stdout END ====
[2026-03-04 08:24:00] 2026-03-04 07:23:59,923 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 08:24:00] 2026-03-04 07:23:59,925 [wrapper] pilotpid: 1979850
[2026-03-04 08:24:00] 2026-03-04 07:23:59,927 [wrapper] Pilot exit status: 0
[2026-03-04 08:24:00] 2026-03-04 07:23:59,936 [wrapper] pandaids: 7036367996
[2026-03-04 08:24:00] 2026-03-04 07:23:59,994 [wrapper] cleanup supervisor_pilot 2088376 1979851
[2026-03-04 08:24:00] 2026-03-04 07:23:59,997 [wrapper] Test setup, not cleaning
[2026-03-04 08:24:00] 2026-03-04 07:23:59,999 [wrapper] apfmon messages muted
[2026-03-04 08:24:00] 2026-03-04 07:24:00,001 [wrapper] ==== wrapper stdout END ====
[2026-03-04 08:24:00] 2026-03-04 07:24:00,004 [wrapper] ==== wrapper stderr END ====
[2026-03-04 08:24:00]  *** Error codes and diagnostics ***
[2026-03-04 08:24:00]     "exeErrorCode": 0,
[2026-03-04 08:24:00]     "exeErrorDiag": "",
[2026-03-04 08:24:00]     "pilotErrorCode": 0,
[2026-03-04 08:24:00]     "pilotErrorDiag": "",
[2026-03-04 08:24:00]  *** Listing of results directory ***
[2026-03-04 08:24:00] total 334924
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc      5111 Mar  3 17:29 queuedata.json
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc    584627 Mar  3 17:29 pilot3.tar.gz
[2026-03-04 08:24:00] -rwx------ 1 boinc boinc     36322 Mar  3 17:30 runpilot2-wrapper.sh
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc       100 Mar  4 06:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 08:24:00] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 06:15 run_atlas
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc       105 Mar  4 06:15 job.xml
[2026-03-04 08:24:00] -rw-r--r-- 2 boinc boinc 189529654 Mar  4 06:15 EVNT.48700856._000102.pool.root.1
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc      6638 Mar  4 06:15 init_data.xml
[2026-03-04 08:24:00] -rw-r--r-- 2 boinc boinc     15845 Mar  4 06:15 start_atlas.sh
[2026-03-04 08:24:00] drwxrwx--x 2 boinc boinc      4096 Mar  4 06:15 shared
[2026-03-04 08:24:00] -rw-r--r-- 2 boinc boinc    597944 Mar  4 06:15 input.tar.gz
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc         0 Mar  4 06:15 boinc_lockfile
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc      2521 Mar  4 06:15 pandaJob.out
[2026-03-04 08:24:00] -rw------- 1 boinc boinc    997749 Mar  4 06:15 agis_schedconf.cvmfs.json
[2026-03-04 08:24:00] -rw------- 1 boinc boinc   1516092 Mar  4 06:15 agis_ddmendpoints.agis.ALL.json
[2026-03-04 08:24:00] -rw------- 1 boinc boinc       452 Mar  4 06:15 workernode_map.json
[2026-03-04 08:24:00] drwx------ 5 boinc boinc      4096 Mar  4 06:15 pilot3
[2026-03-04 08:24:00] -rw------- 1 boinc boinc 146669916 Mar  4 08:22 HITS.48700858._002567.pool.root.1
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc       529 Mar  4 08:22 boinc_task_state.xml
[2026-03-04 08:24:00] -rw------- 1 boinc boinc      1032 Mar  4 08:22 memory_monitor_summary.json
[2026-03-04 08:24:00] -rw------- 1 boinc boinc    304889 Mar  4 08:22 log.48700858._002567.job.log.tgz.1
[2026-03-04 08:24:00] -rw------- 1 boinc boinc      6401 Mar  4 08:22 heartbeat.json
[2026-03-04 08:24:00] -rw------- 1 boinc boinc        95 Mar  4 08:23 pilot_heartbeat.json
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc      8192 Mar  4 08:23 boinc_mmap_file
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc        27 Mar  4 08:23 wrapper_checkpoint.txt
[2026-03-04 08:24:00] -rw------- 1 boinc boinc      4902 Mar  4 08:23 pilotlog.txt
[2026-03-04 08:24:00] -rw------- 1 boinc boinc   1108195 Mar  4 08:24 log.48700858._002567.job.log.1
[2026-03-04 08:24:00] -rw------- 1 boinc boinc       357 Mar  4 08:24 output.list
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc       620 Mar  4 08:24 runtime_log
[2026-03-04 08:24:00] -rw------- 1 boinc boinc   1433600 Mar  4 08:24 result.tar.gz
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc      9204 Mar  4 08:24 runtime_log.err
[2026-03-04 08:24:00] -rw------- 1 boinc boinc       662 Mar  4 08:24 nNKMDmpohH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQuELDmQILRcm.diag
[2026-03-04 08:24:00] -rw-r--r-- 1 boinc boinc     21111 Mar  4 08:24 stderr.txt
[2026-03-04 08:24:00] HITS file was successfully produced:
[2026-03-04 08:24:00] -rw------- 1 boinc boinc 146669916 Mar  4 08:22 shared/HITS.pool.root.1
[2026-03-04 08:24:00]  *** Contents of shared directory: ***
[2026-03-04 08:24:00] total 330332
[2026-03-04 08:24:00] -rw-r--r-- 2 boinc boinc 189529654 Mar  4 06:15 ATLAS.root_0
[2026-03-04 08:24:00] -rw-r--r-- 2 boinc boinc     15845 Mar  4 06:15 start_atlas.sh
[2026-03-04 08:24:00] -rw-r--r-- 2 boinc boinc    597944 Mar  4 06:15 input.tar.gz
[2026-03-04 08:24:00] -rw------- 1 boinc boinc 146669916 Mar  4 08:22 HITS.pool.root.1
[2026-03-04 08:24:00] -rw------- 1 boinc boinc   1433600 Mar  4 08:24 result.tar.gz
08:24:01 (1976029): run_atlas exited; CPU time 29428.072494
08:24:01 (1976029): called boinc_finish(0)

</stderr_txt>
]]>

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