Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-05 00:25:37 (3204347): vboxwrapper version 26210
2026-03-05 00:25:37 (3204347): BOINC client version: 8.2.8
2026-03-05 00:25:37 (3204347): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-03-05 00:25:37 (3204347): Successfully copied 'init_data.xml' to the shared directory.
2026-03-05 00:25:37 (3204347): Create VM. (boinc_7d3cf7f753e02317, slot#3)
2026-03-05 00:25:37 (3204347): Setting Memory Size for VM. (4096MB)
2026-03-05 00:25:37 (3204347): Setting CPU Count for VM. (1)
2026-03-05 00:25:37 (3204347): Setting Chipset Options for VM.
2026-03-05 00:25:37 (3204347): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-05 00:25:37 (3204347): Setting Boot Options for VM.
2026-03-05 00:25:38 (3204347): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-05 00:25:38 (3204347): Enabling VM Network Access.
2026-03-05 00:25:38 (3204347): Disabling USB Support for VM.
2026-03-05 00:25:38 (3204347): Disabling COM Port Support for VM.
2026-03-05 00:25:38 (3204347): Disabling LPT Port Support for VM.
2026-03-05 00:25:38 (3204347): Disabling Audio Support for VM.
2026-03-05 00:25:38 (3204347): Disabling Clipboard Support for VM.
2026-03-05 00:25:38 (3204347): Disabling Drag and Drop Support for VM.
2026-03-05 00:25:38 (3204347): Adding storage controller(s) to VM.
2026-03-05 00:25:38 (3204347): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-05 00:25:39 (3204347): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-05 00:25:39 (3204347): forwarding host port 58283 to guest port 80
2026-03-05 00:25:39 (3204347): Enabling remote desktop for VM.
2026-03-05 00:25:39 (3204347): Enabling shared directory for VM.
2026-03-05 00:25:39 (3204347): Starting VM using VBoxManage interface. (boinc_7d3cf7f753e02317, slot#3)
2026-03-05 00:25:40 (3204347): Successfully started VM. (PID = '3204892')
2026-03-05 00:25:40 (3204347): Reporting VM Process ID to BOINC.
2026-03-05 00:25:40 (3204347): Guest Log: BIOS: VirtualBox 7.2.2
2026-03-05 00:25:40 (3204347): Guest Log: CPUID EDX: 0x178bfbff
2026-03-05 00:25:40 (3204347): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-05 00:25:40 (3204347): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-05 00:25:40 (3204347): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-05 00:25:40 (3204347): Detected: Web Application Enabled (http://localhost:58283)
2026-03-05 00:25:40 (3204347): Detected: Remote Desktop Enabled (localhost:45045)
2026-03-05 00:25:40 (3204347): Preference change detected
2026-03-05 00:25:40 (3204347): Setting CPU throttle for VM. (100%)
2026-03-05 00:25:41 (3204347): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-05 00:25:42 (3204347): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-05 00:25:42 (3204347): Guest Log: BIOS: Booting from Hard Disk...
2026-03-05 00:25:45 (3204347): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-05 00:25:45 (3204347): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-05 00:25:45 (3204347): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-05 00:25:50 (3204347): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-05 00:25:50 (3204347): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-05 00:26:01 (3204347): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.000282 main     Log opened 2026-03-04T23:25:59.258250000Z
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.000504 main     OS Product: Linux
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.000587 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.000636 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.000704 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.000705 main     Process ID: 1240
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.000706 main     Package type: LINUX_64BITS_GENERIC
2026-03-05 00:26:01 (3204347): Guest Log: 00:00:00.002937 main     5.2.32 r132073 started. Verbose level = 0
2026-03-05 00:26:01 (3204347): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-05 00:26:01 (3204347): Guest Log: [INFO] Mounting shared directory
2026-03-05 00:26:01 (3204347): Guest Log: [INFO] Checking for init_data.xml
2026-03-05 00:26:04 (3204347): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-05 00:26:04 (3204347): Guest Log: [INFO] Detected branch: prod
2026-03-05 00:26:04 (3204347): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-05 00:26:04 (3204347): Guest Log: Copying input files
2026-03-05 00:26:08 (3204347): Guest Log: Copied input files into RunAtlas.
2026-03-05 00:26:08 (3204347): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-03-05 00:26:16 (3204347): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-05 00:26:16 (3204347): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-05 00:26:16 (3204347): Guest Log: 2.6.3.0 1519 0 31572 156896 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-03-05 00:26:17 (3204347): Guest Log: copied the webapp to /var/www
2026-03-05 00:26:17 (3204347): Guest Log: core_number=1
2026-03-05 00:26:17 (3204347): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-05 00:26:17 (3204347): Guest Log:  *** Starting ATLAS job. (PandaID=7038490079 taskID=48955010) ***
2026-03-05 02:04:41 (3204347): Status Report: Elapsed Time: '6000.000000'
2026-03-05 02:04:41 (3204347): Status Report: CPU Time: '5916.770000'
2026-03-05 03:43:42 (3204347): Status Report: Elapsed Time: '12000.000000'
2026-03-05 03:43:42 (3204347): Status Report: CPU Time: '11864.420000'
2026-03-05 05:22:42 (3204347): Status Report: Elapsed Time: '18000.000000'
2026-03-05 05:22:42 (3204347): Status Report: CPU Time: '17812.460000'
2026-03-05 07:01:43 (3204347): Status Report: Elapsed Time: '24000.000000'
2026-03-05 07:01:43 (3204347): Status Report: CPU Time: '23760.120000'
2026-03-05 08:40:43 (3204347): Status Report: Elapsed Time: '30000.000000'
2026-03-05 08:40:43 (3204347): Status Report: CPU Time: '29707.840000'
2026-03-05 09:21:19 (3204347): Guest Log:  *** Job finished ***
2026-03-05 09:21:19 (3204347): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:12,468 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:12,469 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:13,245 | INFO     | [monitor] cgroup control has ended
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:13,349 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586363684672)>', '<ExcThread(monitor, started 140585914574592)>']
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:13,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:13,471 | INFO     | [monitor] control thread has ended
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,355 | INFO     | all workflow threads have been joined
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,355 | INFO     | end of generic workflow (traces error code: 0)
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,355 | INFO     | traces error code: 0
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,355 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,473 [wrapper] ==== pilot stdout END ====
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,480 [wrapper] ==== wrapper stdout RESUME ====
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,486 [wrapper] pilotpid: 5854
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,491 [wrapper] Pilot exit status: 0
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,520 [wrapper] pandaids: 7038490079
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,554 [wrapper] cleanup supervisor_pilot   640 5855
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,560 [wrapper] Test setup, not cleaning
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,566 [wrapper] apfmon messages muted
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,572 [wrapper] ==== wrapper stdout END ====
2026-03-05 09:21:19 (3204347): Guest Log: 2026-03-05 08:21:18,578 [wrapper] ==== wrapper stderr END ====
2026-03-05 09:21:19 (3204347): Guest Log:  *** Error codes and diagnostics ***
2026-03-05 09:21:19 (3204347): Guest Log:     "exeErrorCode": 0,
2026-03-05 09:21:19 (3204347): Guest Log:     "exeErrorDiag": "",
2026-03-05 09:21:19 (3204347): Guest Log:     "pilotErrorCode": 0,
2026-03-05 09:21:19 (3204347): Guest Log:     "pilotErrorDiag": "",
2026-03-05 09:21:19 (3204347): Guest Log:  *** Listing of results directory ***
2026-03-05 09:21:19 (3204347): Guest Log: total 185596
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  3 13:54 pilot3.tar.gz
2026-03-05 09:21:19 (3204347): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  3 13:58 runpilot2-wrapper.sh
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  3 14:00 queuedata.json
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas      9951 Mar  4 23:26 init_data.xml
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas    597938 Mar  4 23:26 input.tar.gz
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar  4 23:26 start_atlas.sh
2026-03-05 09:21:19 (3204347): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  4 23:26 EVNT.46701403._001010.pool.root.1 -> /data/./ATLAS.root_0
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Mar  4 23:26 pandaJob.out
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas        50 Mar  4 23:26 setup.sh.local
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas    997765 Mar  4 23:26 agis_schedconf.cvmfs.json
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas       422 Mar  4 23:26 workernode_map.json
2026-03-05 09:21:19 (3204347): Guest Log: drwx------. 5 atlas atlas      4096 Mar  4 23:26 pilot3
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas 176078883 Mar  5 08:19 HITS.48955010._000457.pool.root.1
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas      1022 Mar  5 08:20 memory_monitor_summary.json
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  5 08:20 agis_ddmendpoints.agis.ALL.json
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas    604953 Mar  5 08:20 log.48955010._000457.job.log.tgz.1
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas      6346 Mar  5 08:20 heartbeat.json
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas        95 Mar  5 08:21 pilot_heartbeat.json
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas      4987 Mar  5 08:21 pilotlog.txt
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas   4442200 Mar  5 08:21 log.48955010._000457.job.log.1
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas       357 Mar  5 08:21 output.list
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  5 08:21 runtime_log
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas   5068800 Mar  5 08:21 result.tar.gz
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas       655 Mar  5 08:21 UJ6MDmcRfH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmzyGLDmMDDDxm.diag
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 atlas atlas      9111 Mar  5 08:21 runtime_log.err
2026-03-05 09:21:19 (3204347): Guest Log: Looking for outputfile HITS.48955010._000457.pool.root.1
2026-03-05 09:21:19 (3204347): Guest Log: HITS file was successfully produced
2026-03-05 09:21:19 (3204347): Guest Log: -rw-------. 1 atlas atlas 176078883 Mar  5 08:19 /home/atlas/RunAtlas/HITS.48955010._000457.pool.root.1
2026-03-05 09:21:19 (3204347): Guest Log: Successfully finished the ATLAS job!
2026-03-05 09:21:19 (3204347): Guest Log: Copying the results back to the shared directory!
2026-03-05 09:21:19 (3204347): Guest Log:  *** Contents of shared directory: ***
2026-03-05 09:21:19 (3204347): Guest Log: total 432908
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 root root 437592321 Mar  4 23:25 ATLAS.root_0
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 root root      9951 Mar  4 23:25 init_data.xml
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 root root    597938 Mar  4 23:25 input.tar.gz
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 root root   5068800 Mar  5 08:21 result.tar.gz
2026-03-05 09:21:19 (3204347): Guest Log: -rw-r--r--. 1 root root     15845 Mar  4 23:25 start_atlas.sh
2026-03-05 09:21:19 (3204347): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-05 09:21:19 (3204347): VM Completion File Detected.
2026-03-05 09:21:19 (3204347): Powering off VM.
2026-03-05 09:21:20 (3204347): Successfully stopped VM.
2026-03-05 09:21:20 (3204347): Deregistering VM. (boinc_7d3cf7f753e02317, slot#3)
2026-03-05 09:21:20 (3204347): Removing network bandwidth throttle group from VM.
2026-03-05 09:21:20 (3204347): Removing VM from VirtualBox.
2026-03-05 09:21:25 (3204347): called boinc_finish(0)

</stderr_txt>
]]>

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