Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:12 (2337806): wrapper (7.7.26015): starting
04:00:12 (2337806): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 04:00:12] Arguments: --nthreads 4
[2026-03-04 04:00:12] Threads: 4
[2026-03-04 04:00:12] Checking for CVMFS
[2026-03-04 04:00:12] No cvmfs_config command found, will try listing directly
[2026-03-04 04:00:12] CVMFS is ok
[2026-03-04 04:00:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 04:00:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 04:00:12] Further information can be found at the LHC@home message board.
[2026-03-04 04:00:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 04:00:12] Checking for apptainer binary...
[2026-03-04 04:00:12] which: no apptainer in ((null))
[2026-03-04 04:00:12] apptainer is not installed, using version from CVMFS
[2026-03-04 04:00:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 04:00:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-04 04:00:12] apptainer works
[2026-03-04 04:00:12] Set ATHENA_PROC_NUMBER=4
[2026-03-04 04:00:12] Set ATHENA_CORE_NUMBER=4
[2026-03-04 04:00:12] Starting ATLAS job with PandaID=7038489919
[2026-03-04 04:00:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 05:20:40]  *** The last 200 lines of the pilot log: ***
[2026-03-04 05:20:40]  guid=3975dc3e-0c96-40bc-92fd-f4cfa54ff6cc
[2026-03-04 05:20:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-04 05:20:40]  is_altstaged=None
[2026-03-04 05:20:40]  is_tar=False
[2026-03-04 05:20:40]  lfn=log.48955010._000297.job.log.tgz.1
[2026-03-04 05:20:40]  mtime=0
[2026-03-04 05:20:40]  protocol_id=None
[2026-03-04 05:20:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 05:20:40]  replicas=None
[2026-03-04 05:20:40]  scope=mc23_13p6TeV
[2026-03-04 05:20:40]  status=None
[2026-03-04 05:20:40]  status_code=0
[2026-03-04 05:20:40]  storage_token=
[2026-03-04 05:20:40]  surl=/var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7038489919/log.48955010._000297.job.log.tgz.1
[2026-03-04 05:20:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/91/log.48955010._000297.job.log.tgz.1
[2026-03-04 05:20:40]  workdir=None
[2026-03-04 05:20:40] ]
[2026-03-04 05:20:40] 2026-03-04 04:20:05,690 | INFO     | transferring file log.48955010._000297.job.log.tgz.1 from /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7038489919/log.48955010._000297.job.log.tgz.1 to /var/lib/
[2026-03-04 05:20:40] 2026-03-04 04:20:05,691 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7038489919/log.48955010._000297.job.log.tgz.1 /var/lib/boinc/var/slot236/slots/0/
[2026-03-04 05:20:40] 2026-03-04 04:20:05,705 | INFO     | adding to output.list: log.48955010._000297.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/91/log.48955010._000297.job.log.tg
[2026-03-04 05:20:40] 2026-03-04 04:20:05,707 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 05:20:40] 2026-03-04 04:20:05,707 | INFO     | summary of transferred files:
[2026-03-04 05:20:40] 2026-03-04 04:20:05,707 | INFO     |  -- lfn=log.48955010._000297.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 05:20:40] 2026-03-04 04:20:05,707 | INFO     | stage-out finished correctly
[2026-03-04 05:20:40] 2026-03-04 04:20:05,758 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 05:20:40] 2026-03-04 04:20:05,886 | WARNING  | process 2400223 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 05:20:40] 2026-03-04 04:20:05,886 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7038489919/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 05:20:40] 2026-03-04 04:20:06,387 | INFO     | number of running child processes to parent process 2400223: 1
[2026-03-04 05:20:40] 2026-03-04 04:20:06,387 | INFO     | maximum number of monitored processes: 6
[2026-03-04 05:20:40] 2026-03-04 04:20:07,379 | INFO     | job 7038489919 has state=finished
[2026-03-04 05:20:40] 2026-03-04 04:20:07,379 | INFO     | preparing for final server update for job 7038489919 in state='finished'
[2026-03-04 05:20:40] 2026-03-04 04:20:07,379 | INFO     | reading metadata from: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7038489919/jobReport.json
[2026-03-04 05:20:40] 2026-03-04 04:20:07,381 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot236/slots/0/workernode_map.json
[2026-03-04 05:20:40] 2026-03-04 04:20:07,381 | INFO     | this job has now completed (state=finished)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,381 | INFO     | log transfer has been attempted: DONE
[2026-03-04 05:20:40] 2026-03-04 04:20:07,381 | INFO     | job 7038489919 has finished - writing final server update
[2026-03-04 05:20:40] 2026-03-04 04:20:07,382 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19507/.job.ad'
[2026-03-04 05:20:40] 2026-03-04 04:20:07,382 | INFO     | total number of processed events: 400 (read)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,401 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7038489919/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,401 | INFO     | extracted standard info from prmon json
[2026-03-04 05:20:40] 2026-03-04 04:20:07,401 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 05:20:40] 2026-03-04 04:20:07,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 05:20:40] 2026-03-04 04:20:07,402 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 05:20:40] 2026-03-04 04:20:07,402 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | fitting pss+swap vs Time
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | sum of square deviations: 110960220.0
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | sum of deviations: 247242942.99999997
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | mean x: 1772595690.0
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | mean y: 2327961.971830986
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | intersect: -3947391812.779117
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | chi2: 0.00023585411948838725
[2026-03-04 05:20:40] 2026-03-04 04:20:07,403 | INFO     | current memory leak: 2.23 B/s (using 71 data points, chi2=0.00)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | could have reported an average CPU frequency of 3607 MHz (6 samples)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | ..............................
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . Timing measurements:
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . get job = 0 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . initial setup = 5 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . payload setup = 6 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . stage-in = 0 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . payload execution = 4756 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . stage-out = 0 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | . log creation = 0 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,404 | INFO     | ..............................
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | 
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | job summary report
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | --------------------------------------------------
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | PanDA job id: 7038489919
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | task id: 48955010
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | errors: (none)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | pilot state: finished 
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | transexitcode: 0
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | exeerrorcode: 0
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | exeerrordiag: 
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | exitcode: 0
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | exitmsg: OK
[2026-03-04 05:20:40] 2026-03-04 04:20:07,454 | INFO     | cpuconsumptiontime: 18073 s
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | nevents: 400
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | neventsw: 0
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | pid: 2400223
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | pgrp: 2400223
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | corecount: 4
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | event service: False
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | sizes: {0: 2287074, 11: 2287074, 4767: 2322379, 4768: 2322379, 4769: 2322573}
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | --------------------------------------------------
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | 
[2026-03-04 05:20:40] 2026-03-04 04:20:07,455 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,478 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,478 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,478 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,478 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,478 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 05:20:40] 2026-03-04 04:20:07,478 | INFO     | job 7038489919 has completed (purged errors)
[2026-03-04 05:20:40] 2026-03-04 04:20:07,478 | INFO     | overall cleanup function is called
[2026-03-04 05:20:40] 2026-03-04 04:20:08,485 | INFO     | --- collectZombieJob: --- 10, [2400223]
[2026-03-04 05:20:40] 2026-03-04 04:20:08,485 | INFO     | zombie collector waiting for pid 2400223
[2026-03-04 05:20:40] 2026-03-04 04:20:08,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 05:20:40] 2026-03-04 04:20:08,485 | INFO     | collected zombie processes
[2026-03-04 05:20:40] 2026-03-04 04:20:08,485 | INFO     | will attempt to kill all subprocesses of pid=2400223
[2026-03-04 05:20:40] 2026-03-04 04:20:08,977 | INFO     | process IDs to be killed: [2400223] (in reverse order)
[2026-03-04 05:20:40] 2026-03-04 04:20:09,199 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 05:20:40] 2026-03-04 04:20:09,199 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 05:20:40] 2026-03-04 04:20:09,233 | INFO     | did not find any defunct processes belonging to 2400223
[2026-03-04 05:20:40] 2026-03-04 04:20:09,267 | INFO     | did not find any defunct processes belonging to 2400223
[2026-03-04 05:20:40] 2026-03-04 04:20:09,267 | INFO     | ready for new job
[2026-03-04 05:20:40] 2026-03-04 04:20:09,267 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 05:20:40] 2026-03-04 04:20:09,268 | INFO     | **************************************
[2026-03-04 05:20:40] 2026-03-04 04:20:09,269 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 05:20:40] 2026-03-04 04:20:09,269 | INFO     | **************************************
[2026-03-04 05:20:40] 2026-03-04 04:20:09,269 | INFO     | 
[2026-03-04 05:20:40] 2026-03-04 04:20:09,275 | INFO     | architecture information:
[2026-03-04 05:20:40] 2026-03-04 04:20:09,275 | INFO     | executing command: cat /etc/os-release
[2026-03-04 05:20:40] 2026-03-04 04:20:09,289 | INFO     | cat /etc/os-release:
[2026-03-04 05:20:40] NAME="CentOS Linux"
[2026-03-04 05:20:40] VERSION="7 (Core)"
[2026-03-04 05:20:40] ID="centos"
[2026-03-04 05:20:40] ID_LIKE="rhel fedora"
[2026-03-04 05:20:40] VERSION_ID="7"
[2026-03-04 05:20:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 05:20:40] ANSI_COLOR="0;31"
[2026-03-04 05:20:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 05:20:40] HOME_URL="https://www.centos.org/"
[2026-03-04 05:20:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 05:20:40] 
[2026-03-04 05:20:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 05:20:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 05:20:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 05:20:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 05:20:40] 
[2026-03-04 05:20:40] 2026-03-04 04:20:09,289 | INFO     | **************************************
[2026-03-04 05:20:40] 2026-03-04 04:20:09,792 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-04 05:20:40] 2026-03-04 04:20:09,809 | INFO     | sufficient remaining disk space (20526923776 B)
[2026-03-04 05:20:40] 2026-03-04 04:20:09,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 05:20:40] 2026-03-04 04:20:09,809 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 05:20:40] 2026-03-04 04:20:09,809 | INFO     | update_server=False
[2026-03-04 05:20:40] 2026-03-04 04:20:09,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 05:20:40] 2026-03-04 04:20:09,897 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 05:20:40] 2026-03-04 04:20:09,898 | INFO     | aborting loop
[2026-03-04 05:20:40] 2026-03-04 04:20:10,197 | INFO     | all data control threads have been joined
[2026-03-04 05:20:40] 2026-03-04 04:20:10,243 | INFO     | all job control threads have been joined
[2026-03-04 05:20:40] 2026-03-04 04:20:10,720 | INFO     | all payload control threads have been joined
[2026-03-04 05:20:40] 2026-03-04 04:20:10,814 | INFO     | [job] retrieve thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:10,902 | INFO     | [job] job monitor thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,062 | INFO     | [payload] failed_post thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,202 | INFO     | [data] control thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,248 | INFO     | [job] control thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 05:20:40] 2026-03-04 04:20:11,463 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,470 | INFO     | [job] validate thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,618 | INFO     | [data] copytool_in thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,646 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,726 | INFO     | [payload] control thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:11,812 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 05:20:40] 2026-03-04 04:20:11,922 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:12,377 | INFO     | [payload] validate_post thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:12,464 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 05:20:40] 2026-03-04 04:20:13,272 | INFO     | [data] copytool_out thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:13,469 | INFO     | [job] queue monitor thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:15,818 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:20,027 | INFO     | job.realtimelogging is not enabled
[2026-03-04 05:20:40] 2026-03-04 04:20:21,032 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 05:20:40] 2026-03-04 04:20:34,488 | INFO     | [monitor] cgroup control has ended
[2026-03-04 05:20:40] 2026-03-04 04:20:34,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23400621373248)>', '<ExcThread(monitor, started 23400294586112)>']
[2026-03-04 05:20:40] 2026-03-04 04:20:39,329 | INFO     | PID=2364668 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 05:20:40] 2026-03-04 04:20:39,329 | INFO     | .. there are 35 such processes running
[2026-03-04 05:20:40] 2026-03-04 04:20:39,330 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 05:20:40] 2026-03-04 04:20:39,330 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 05:20:40] 2026-03-04 04:20:39,330 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 05:20:40] 2026-03-04 04:20:39,330 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 05:20:40] 2026-03-04 04:20:39,330 | INFO     | [monitor] control thread has ended
[2026-03-04 05:20:40] 2026-03-04 04:20:39,682 | INFO     | all workflow threads have been joined
[2026-03-04 05:20:40] 2026-03-04 04:20:39,682 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 05:20:40] 2026-03-04 04:20:39,682 | INFO     | traces error code: 0
[2026-03-04 05:20:40] 2026-03-04 04:20:39,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 05:20:40] 2026-03-04 04:20:39,885 [wrapper] ==== pilot stdout END ====
[2026-03-04 05:20:40] 2026-03-04 04:20:39,888 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 05:20:40] 2026-03-04 04:20:39,891 [wrapper] pilotpid: 2364668
[2026-03-04 05:20:40] 2026-03-04 04:20:39,893 [wrapper] Pilot exit status: 0
[2026-03-04 05:20:40] 2026-03-04 04:20:39,904 [wrapper] pandaids: 7038489919
[2026-03-04 05:20:40] 2026-03-04 04:20:40,046 [wrapper] cleanup supervisor_pilot 2974098 2364669
[2026-03-04 05:20:40] 2026-03-04 04:20:40,049 [wrapper] Test setup, not cleaning
[2026-03-04 05:20:40] 2026-03-04 04:20:40,052 [wrapper] apfmon messages muted
[2026-03-04 05:20:40] 2026-03-04 04:20:40,055 [wrapper] ==== wrapper stdout END ====
[2026-03-04 05:20:40] 2026-03-04 04:20:40,057 [wrapper] ==== wrapper stderr END ====
[2026-03-04 05:20:40]  *** Error codes and diagnostics ***
[2026-03-04 05:20:40]     "exeErrorCode": 0,
[2026-03-04 05:20:40]     "exeErrorDiag": "",
[2026-03-04 05:20:40]     "pilotErrorCode": 0,
[2026-03-04 05:20:40]     "pilotErrorDiag": "",
[2026-03-04 05:20:40]  *** Listing of results directory ***
[2026-03-04 05:20:40] total 613052
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-04 05:20:40] -rwx------. 1 boinc boinc     36322 Mar  3 14:56 runpilot2-wrapper.sh
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc      5111 Mar  3 14:58 queuedata.json
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc       100 Mar  4 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 05:20:40] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 04:00 run_atlas
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc       105 Mar  4 04:00 job.xml
[2026-03-04 05:20:40] -rw-r--r--. 2 boinc boinc 437168467 Mar  4 04:00 EVNT.46701403._001006.pool.root.1
[2026-03-04 05:20:40] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:00 start_atlas.sh
[2026-03-04 05:20:40] drwxrwx--x. 2 boinc boinc      4096 Mar  4 04:00 shared
[2026-03-04 05:20:40] -rw-r--r--. 2 boinc boinc    597944 Mar  4 04:00 input.tar.gz
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc      6703 Mar  4 04:00 init_data.xml
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc         0 Mar  4 04:00 boinc_lockfile
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc      2561 Mar  4 04:00 pandaJob.out
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc    998484 Mar  4 04:00 agis_schedconf.cvmfs.json
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc   1516092 Mar  4 04:00 agis_ddmendpoints.agis.ALL.json
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc       445 Mar  4 04:00 workernode_map.json
[2026-03-04 05:20:40] drwx------. 5 boinc boinc      4096 Mar  4 04:00 pilot3
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc 184654455 Mar  4 05:19 HITS.48955010._000297.pool.root.1
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc       529 Mar  4 05:19 boinc_task_state.xml
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc      1044 Mar  4 05:20 memory_monitor_summary.json
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc    303442 Mar  4 05:20 log.48955010._000297.job.log.tgz.1
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc      6352 Mar  4 05:20 heartbeat.json
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc      8192 Mar  4 05:20 boinc_mmap_file
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc        26 Mar  4 05:20 wrapper_checkpoint.txt
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc        95 Mar  4 05:20 pilot_heartbeat.json
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc      4902 Mar  4 05:20 pilotlog.txt
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc    698744 Mar  4 05:20 log.48955010._000297.job.log.1
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc       357 Mar  4 05:20 output.list
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc       620 Mar  4 05:20 runtime_log
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc   1024000 Mar  4 05:20 result.tar.gz
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc       663 Mar  4 05:20 wTIKDmPPfH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmxsGLDmcrtSzm.diag
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc      9221 Mar  4 05:20 runtime_log.err
[2026-03-04 05:20:40] -rw-r--r--. 1 boinc boinc     21258 Mar  4 05:20 stderr.txt
[2026-03-04 05:20:40] HITS file was successfully produced:
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc 184654455 Mar  4 05:19 shared/HITS.pool.root.1
[2026-03-04 05:20:40]  *** Contents of shared directory: ***
[2026-03-04 05:20:40] total 608860
[2026-03-04 05:20:40] -rw-r--r--. 2 boinc boinc 437168467 Mar  4 04:00 ATLAS.root_0
[2026-03-04 05:20:40] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:00 start_atlas.sh
[2026-03-04 05:20:40] -rw-r--r--. 2 boinc boinc    597944 Mar  4 04:00 input.tar.gz
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc 184654455 Mar  4 05:19 HITS.pool.root.1
[2026-03-04 05:20:40] -rw-------. 1 boinc boinc   1024000 Mar  4 05:20 result.tar.gz
05:23:13 (2337806): run_atlas exited; CPU time 18320.347469
05:23:13 (2337806): called boinc_finish(0)

</stderr_txt>
]]>

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