Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:05:24 (1389654): wrapper (7.7.26015): starting
07:05:24 (1389654): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 07:05:24] Arguments: --nthreads 4
[2026-03-04 07:05:24] Threads: 4
[2026-03-04 07:05:24] Checking for CVMFS
[2026-03-04 07:05:24] No cvmfs_config command found, will try listing directly
[2026-03-04 07:05:24] CVMFS is ok
[2026-03-04 07:05:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 07:05:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 07:05:24] Further information can be found at the LHC@home message board.
[2026-03-04 07:05:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 07:05:24] Checking for apptainer binary...
[2026-03-04 07:05:24] which: no apptainer in ((null))
[2026-03-04 07:05:24] apptainer is not installed, using version from CVMFS
[2026-03-04 07:05:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 07:05:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-04 07:05:24] apptainer works
[2026-03-04 07:05:24] Set ATHENA_PROC_NUMBER=4
[2026-03-04 07:05:24] Set ATHENA_CORE_NUMBER=4
[2026-03-04 07:05:25] Starting ATLAS job with PandaID=7036392059
[2026-03-04 07:05:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 09:58:07]  *** The last 200 lines of the pilot log: ***
[2026-03-04 09:58:07] 2026-03-04 08:57:02,185 | INFO     | intersect: -3356615751.2552667
[2026-03-04 09:58:07] 2026-03-04 08:57:02,185 | INFO     | chi2: 0.000753847034645964
[2026-03-04 09:58:07] 2026-03-04 08:57:02,185 | INFO     | current chi2=0.000753847034645964 (change=45.79662678985948 %)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,186 | INFO     | sum of square deviations: 1110539892.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,186 | INFO     | sum of deviations: 1604773848.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,186 | INFO     | mean x: 1772609922.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,187 | INFO     | mean y: 2331238.163398693
[2026-03-04 09:58:07] 2026-03-04 08:57:02,187 | INFO     | intersect: -2559159858.214902
[2026-03-04 09:58:07] 2026-03-04 08:57:02,187 | INFO     | chi2: 0.00025673487197401556
[2026-03-04 09:58:07] 2026-03-04 08:57:02,187 | INFO     | current chi2=0.00025673487197401556 (change=65.94337310160167 %)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,187 | INFO     | sum of square deviations: 1005179777.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,188 | INFO     | sum of deviations: 1242360587.0000002
[2026-03-04 09:58:07] 2026-03-04 08:57:02,188 | INFO     | mean x: 1772610074.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,188 | INFO     | mean y: 2331762.378378378
[2026-03-04 09:58:07] 2026-03-04 08:57:02,188 | INFO     | intersect: -2188540898.480908
[2026-03-04 09:58:07] 2026-03-04 08:57:02,189 | INFO     | chi2: 0.00017019948337003606
[2026-03-04 09:58:07] 2026-03-04 08:57:02,189 | INFO     | current chi2=0.00017019948337003606 (change=33.70612957196475 %)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,189 | INFO     | sum of square deviations: 906703512.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,190 | INFO     | sum of deviations: 967618356.0000011
[2026-03-04 09:58:07] 2026-03-04 08:57:02,190 | INFO     | mean x: 1772610227.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,190 | INFO     | mean y: 2332187.3426573426
[2026-03-04 09:58:07] 2026-03-04 08:57:02,190 | INFO     | intersect: -1889366886.2554262
[2026-03-04 09:58:07] 2026-03-04 08:57:02,190 | INFO     | chi2: 0.00012050608534666551
[2026-03-04 09:58:07] 2026-03-04 08:57:02,190 | INFO     | current chi2=0.00012050608534666551 (change=29.197149744180223 %)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,191 | INFO     | sum of square deviations: 814878534.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,191 | INFO     | sum of deviations: 708645997.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,191 | INFO     | mean x: 1772610379.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,191 | INFO     | mean y: 2332617.5289855073
[2026-03-04 09:58:07] 2026-03-04 08:57:02,192 | INFO     | intersect: -1539189458.9242764
[2026-03-04 09:58:07] 2026-03-04 08:57:02,192 | INFO     | chi2: 6.252152163247301e-05
[2026-03-04 09:58:07] 2026-03-04 08:57:02,192 | INFO     | current chi2=6.252152163247301e-05 (change=48.11753991293102 %)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,192 | INFO     | sum of square deviations: 729472282.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,193 | INFO     | sum of deviations: 557006799.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,193 | INFO     | mean x: 1772610532.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,193 | INFO     | mean y: 2332885.7819548873
[2026-03-04 09:58:07] 2026-03-04 08:57:02,193 | INFO     | intersect: -1351188204.280528
[2026-03-04 09:58:07] 2026-03-04 08:57:02,193 | INFO     | chi2: 3.6889912313563486e-05
[2026-03-04 09:58:07] 2026-03-04 08:57:02,193 | INFO     | current chi2=3.6889912313563486e-05 (change=40.996457939047886 %)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,194 | INFO     | sum of square deviations: 650252192.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,194 | INFO     | sum of deviations: 484641462.0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,194 | INFO     | mean x: 1772610684.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,195 | INFO     | mean y: 2333025.046875
[2026-03-04 09:58:07] 2026-03-04 08:57:02,195 | INFO     | intersect: -1318816898.4168212
[2026-03-04 09:58:07] 2026-03-04 08:57:02,195 | INFO     | chi2: 3.650367824525874e-05
[2026-03-04 09:58:07] 2026-03-04 08:57:02,195 | INFO     | current chi2=3.650367824525874e-05 (change=1.0469910175490837 %)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,195 | INFO     | left removable region: 80
[2026-03-04 09:58:07] 2026-03-04 08:57:02,195 | INFO     | sum of square deviations: 170944600.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,196 | INFO     | sum of deviations: 123026721.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,196 | INFO     | mean x: 1772611721.5
[2026-03-04 09:58:07] 2026-03-04 08:57:02,196 | INFO     | mean y: 2333497.7195121953
[2026-03-04 09:58:07] 2026-03-04 08:57:02,196 | INFO     | intersect: -1273393304.71094
[2026-03-04 09:58:07] 2026-03-04 08:57:02,196 | INFO     | chi2: 1.2735952698719203e-05
[2026-03-04 09:58:07] 2026-03-04 08:57:02,196 | INFO     | current memory leak: 0.72 B/s (using 82 data points, chi2=0.00)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | could have reported an average CPU frequency of 2756 MHz (9 samples)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | ..............................
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . Timing measurements:
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . get job = 0 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . initial setup = 7 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . payload setup = 7 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . stage-in = 0 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . payload execution = 10247 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . stage-out = 0 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,197 | INFO     | . log creation = 0 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,198 | INFO     | ..............................
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | 
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | job summary report
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | --------------------------------------------------
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | PanDA job id: 7036392059
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | task id: 48851470
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | errors: (none)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | pilot state: finished 
[2026-03-04 09:58:07] 2026-03-04 08:57:02,289 | INFO     | transexitcode: 0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | exeerrorcode: 0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | exeerrordiag: 
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | exitcode: 0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | exitmsg: OK
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | cpuconsumptiontime: 39543 s
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | nevents: 400
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | neventsw: 0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | pid: 1399094
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | pgrp: 1399094
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | corecount: 4
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | event service: False
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | sizes: {0: 2286790, 1: 2287194, 11: 2287194, 10259: 2316040, 10260: 2325060, 10264: 2325116, 10266: 2325502}
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | --------------------------------------------------
[2026-03-04 09:58:07] 2026-03-04 08:57:02,290 | INFO     | 
[2026-03-04 09:58:07] 2026-03-04 08:57:02,291 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2026-03-04 09:58:07] 2026-03-04 08:57:02,318 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,318 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,318 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,318 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,318 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,319 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,320 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,320 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 09:58:07] 2026-03-04 08:57:02,320 | INFO     | job 7036392059 has completed (purged errors)
[2026-03-04 09:58:07] 2026-03-04 08:57:02,320 | INFO     | overall cleanup function is called
[2026-03-04 09:58:07] 2026-03-04 08:57:03,329 | INFO     | --- collectZombieJob: --- 10, [1399094]
[2026-03-04 09:58:07] 2026-03-04 08:57:03,330 | INFO     | zombie collector waiting for pid 1399094
[2026-03-04 09:58:07] 2026-03-04 08:57:03,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 09:58:07] 2026-03-04 08:57:03,330 | INFO     | collected zombie processes
[2026-03-04 09:58:07] 2026-03-04 08:57:03,330 | INFO     | will attempt to kill all subprocesses of pid=1399094
[2026-03-04 09:58:07] 2026-03-04 08:57:03,925 | INFO     | process IDs to be killed: [1399094] (in reverse order)
[2026-03-04 09:58:07] 2026-03-04 08:57:04,150 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 09:58:07] 2026-03-04 08:57:04,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 09:58:07] 2026-03-04 08:57:04,172 | INFO     | did not find any defunct processes belonging to 1399094
[2026-03-04 09:58:07] 2026-03-04 08:57:04,190 | INFO     | did not find any defunct processes belonging to 1399094
[2026-03-04 09:58:07] 2026-03-04 08:57:04,191 | INFO     | ready for new job
[2026-03-04 09:58:07] 2026-03-04 08:57:04,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 09:58:07] 2026-03-04 08:57:04,193 | INFO     | **************************************
[2026-03-04 09:58:07] 2026-03-04 08:57:04,193 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 09:58:07] 2026-03-04 08:57:04,193 | INFO     | **************************************
[2026-03-04 09:58:07] 2026-03-04 08:57:04,193 | INFO     | 
[2026-03-04 09:58:07] 2026-03-04 08:57:04,201 | INFO     | architecture information:
[2026-03-04 09:58:07] 2026-03-04 08:57:04,201 | INFO     | executing command: cat /etc/os-release
[2026-03-04 09:58:07] 2026-03-04 08:57:04,225 | INFO     | cat /etc/os-release:
[2026-03-04 09:58:07] NAME="CentOS Linux"
[2026-03-04 09:58:07] VERSION="7 (Core)"
[2026-03-04 09:58:07] ID="centos"
[2026-03-04 09:58:07] ID_LIKE="rhel fedora"
[2026-03-04 09:58:07] VERSION_ID="7"
[2026-03-04 09:58:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 09:58:07] ANSI_COLOR="0;31"
[2026-03-04 09:58:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 09:58:07] HOME_URL="https://www.centos.org/"
[2026-03-04 09:58:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 09:58:07] 
[2026-03-04 09:58:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 09:58:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 09:58:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 09:58:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 09:58:07] 
[2026-03-04 09:58:07] 2026-03-04 08:57:04,225 | INFO     | **************************************
[2026-03-04 09:58:07] 2026-03-04 08:57:04,729 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2026-03-04 09:58:07] 2026-03-04 08:57:04,750 | INFO     | sufficient remaining disk space (3314953486336 B)
[2026-03-04 09:58:07] 2026-03-04 08:57:04,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 09:58:07] 2026-03-04 08:57:04,751 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 09:58:07] 2026-03-04 08:57:04,751 | INFO     | update_server=False
[2026-03-04 09:58:07] 2026-03-04 08:57:04,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 09:58:07] 2026-03-04 08:57:04,751 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:58:07] 2026-03-04 08:57:04,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 09:58:07] 2026-03-04 08:57:04,754 | INFO     | aborting loop
[2026-03-04 09:58:07] 2026-03-04 08:57:05,056 | INFO     | all payload control threads have been joined
[2026-03-04 09:58:07] 2026-03-04 08:57:05,225 | INFO     | all data control threads have been joined
[2026-03-04 09:58:07] 2026-03-04 08:57:05,622 | INFO     | all job control threads have been joined
[2026-03-04 09:58:07] 2026-03-04 08:57:05,756 | INFO     | [job] retrieve thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:05,759 | INFO     | [job] job monitor thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:05,830 | INFO     | [payload] failed_post thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:05,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 09:58:07] 2026-03-04 08:57:05,949 | INFO     | [job] validate thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:06,061 | INFO     | [payload] control thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:06,230 | INFO     | [data] control thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:06,265 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:06,386 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:06,627 | INFO     | [job] control thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:06,691 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:06,760 | INFO     | [data] copytool_out thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:07,009 | INFO     | [data] copytool_in thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:07,189 | INFO     | [payload] validate_post thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:07,299 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:58:07] 2026-03-04 08:57:08,304 | INFO     | [job] queue monitor thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:09,849 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:15,130 | INFO     | job.realtimelogging is not enabled
[2026-03-04 09:58:07] 2026-03-04 08:57:16,135 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 09:58:07] 2026-03-04 08:57:34,715 | INFO     | PID=1393971 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 09:58:07] 2026-03-04 08:57:34,715 | INFO     | .. there are 19 such processes running
[2026-03-04 09:58:07] 2026-03-04 08:57:34,715 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 09:58:07] 2026-03-04 08:57:34,716 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 09:58:07] 2026-03-04 08:57:34,716 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 09:58:07] 2026-03-04 08:58:00,508 | INFO     | [monitor] cgroup control has ended
[2026-03-04 09:58:07] 2026-03-04 08:58:02,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23414584031040)>', '<ExcThread(monitor, started 23414278444800)>']
[2026-03-04 09:58:07] 2026-03-04 08:58:02,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 09:58:07] 2026-03-04 08:58:02,844 | INFO     | [monitor] control thread has ended
[2026-03-04 09:58:07] 2026-03-04 08:58:07,543 | INFO     | all workflow threads have been joined
[2026-03-04 09:58:07] 2026-03-04 08:58:07,544 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 09:58:07] 2026-03-04 08:58:07,544 | INFO     | traces error code: 0
[2026-03-04 09:58:07] 2026-03-04 08:58:07,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 09:58:07] 2026-03-04 08:58:07,669 [wrapper] ==== pilot stdout END ====
[2026-03-04 09:58:07] 2026-03-04 08:58:07,673 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 09:58:07] 2026-03-04 08:58:07,678 [wrapper] pilotpid: 1393971
[2026-03-04 09:58:07] 2026-03-04 08:58:07,681 [wrapper] Pilot exit status: 0
[2026-03-04 09:58:07] 2026-03-04 08:58:07,696 [wrapper] pandaids: 7036392059
[2026-03-04 09:58:07] 2026-03-04 08:58:07,851 [wrapper] cleanup supervisor_pilot 1638786 1393972
[2026-03-04 09:58:07] 2026-03-04 08:58:07,855 [wrapper] Test setup, not cleaning
[2026-03-04 09:58:07] 2026-03-04 08:58:07,860 [wrapper] apfmon messages muted
[2026-03-04 09:58:07] 2026-03-04 08:58:07,864 [wrapper] ==== wrapper stdout END ====
[2026-03-04 09:58:07] 2026-03-04 08:58:07,868 [wrapper] ==== wrapper stderr END ====
[2026-03-04 09:58:07]  *** Error codes and diagnostics ***
[2026-03-04 09:58:07]     "exeErrorCode": 0,
[2026-03-04 09:58:07]     "exeErrorDiag": "",
[2026-03-04 09:58:07]     "pilotErrorCode": 0,
[2026-03-04 09:58:07]     "pilotErrorDiag": "",
[2026-03-04 09:58:07]  *** Listing of results directory ***
[2026-03-04 09:58:07] total 387348
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc    584627 Mar  3 19:24 pilot3.tar.gz
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc      5111 Mar  3 19:32 queuedata.json
[2026-03-04 09:58:07] -rwx------ 1 boinc boinc     36322 Mar  3 19:32 runpilot2-wrapper.sh
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc       100 Mar  4 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 09:58:07] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 07:05 run_atlas
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc       105 Mar  4 07:05 job.xml
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc      6697 Mar  4 07:05 init_data.xml
[2026-03-04 09:58:07] -rw-r--r-- 2 boinc boinc 220203455 Mar  4 07:05 EVNT.48460172._000001.pool.root.1
[2026-03-04 09:58:07] -rw-r--r-- 2 boinc boinc     15845 Mar  4 07:05 start_atlas.sh
[2026-03-04 09:58:07] drwxrwx--x 2 boinc boinc      4096 Mar  4 07:05 shared
[2026-03-04 09:58:07] -rw-r--r-- 2 boinc boinc    597965 Mar  4 07:05 input.tar.gz
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc         0 Mar  4 07:05 boinc_lockfile
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc      2625 Mar  4 07:05 pandaJob.out
[2026-03-04 09:58:07] -rw------- 1 boinc boinc    997749 Mar  4 07:05 agis_schedconf.cvmfs.json
[2026-03-04 09:58:07] -rw------- 1 boinc boinc   1516092 Mar  4 07:05 agis_ddmendpoints.agis.ALL.json
[2026-03-04 09:58:07] -rw------- 1 boinc boinc       442 Mar  4 07:05 workernode_map.json
[2026-03-04 09:58:07] drwx------ 5 boinc boinc      4096 Mar  4 07:05 pilot3
[2026-03-04 09:58:07] -rw------- 1 boinc boinc 168934094 Mar  4 09:56 HITS.48851470._000013.pool.root.1
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc       531 Mar  4 09:56 boinc_task_state.xml
[2026-03-04 09:58:07] -rw------- 1 boinc boinc      1023 Mar  4 09:56 memory_monitor_summary.json
[2026-03-04 09:58:07] -rw------- 1 boinc boinc        95 Mar  4 09:56 pilot_heartbeat.json
[2026-03-04 09:58:07] -rw------- 1 boinc boinc    345222 Mar  4 09:56 log.48851470._000013.job.log.tgz.1
[2026-03-04 09:58:07] -rw------- 1 boinc boinc      6338 Mar  4 09:57 heartbeat.json
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc      8192 Mar  4 09:58 boinc_mmap_file
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc        28 Mar  4 09:58 wrapper_checkpoint.txt
[2026-03-04 09:58:07] -rw------- 1 boinc boinc      4903 Mar  4 09:58 pilotlog.txt
[2026-03-04 09:58:07] -rw------- 1 boinc boinc   1444249 Mar  4 09:58 log.48851470._000013.job.log.1
[2026-03-04 09:58:07] -rw------- 1 boinc boinc       357 Mar  4 09:58 output.list
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc       620 Mar  4 09:58 runtime_log
[2026-03-04 09:58:07] -rw------- 1 boinc boinc   1802240 Mar  4 09:58 result.tar.gz
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc      9205 Mar  4 09:58 runtime_log.err
[2026-03-04 09:58:07] -rw------- 1 boinc boinc       664 Mar  4 09:58 H4GODm5ijH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcOHLDmz5ZAHo.diag
[2026-03-04 09:58:07] -rw-r--r-- 1 boinc boinc     20732 Mar  4 09:58 stderr.txt
[2026-03-04 09:58:07] HITS file was successfully produced:
[2026-03-04 09:58:07] -rw------- 1 boinc boinc 168934094 Mar  4 09:56 shared/HITS.pool.root.1
[2026-03-04 09:58:07]  *** Contents of shared directory: ***
[2026-03-04 09:58:07] total 382388
[2026-03-04 09:58:07] -rw-r--r-- 2 boinc boinc 220203455 Mar  4 07:05 ATLAS.root_0
[2026-03-04 09:58:07] -rw-r--r-- 2 boinc boinc     15845 Mar  4 07:05 start_atlas.sh
[2026-03-04 09:58:07] -rw-r--r-- 2 boinc boinc    597965 Mar  4 07:05 input.tar.gz
[2026-03-04 09:58:07] -rw------- 1 boinc boinc 168934094 Mar  4 09:56 HITS.pool.root.1
[2026-03-04 09:58:07] -rw------- 1 boinc boinc   1802240 Mar  4 09:58 result.tar.gz
09:58:09 (1389654): run_atlas exited; CPU time 40056.510142
09:58:09 (1389654): called boinc_finish(0)

</stderr_txt>
]]>

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