Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:09:50 (1573903): wrapper (7.7.26015): starting
08:09:50 (1573903): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 08:09:50] Arguments: --nthreads 4
[2026-03-04 08:09:50] Threads: 4
[2026-03-04 08:09:50] Checking for CVMFS
[2026-03-04 08:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 08:09:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 08:09:51] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 08:09:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 08:09:51] 2.9.2.0 56696 9593 101684 156873 3 49 25731881 36864000 0 130560 0 4204248 99.983 364333 15133 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-04 08:09:51] CVMFS is ok
[2026-03-04 08:09:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 08:09:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 08:09:51] Further information can be found at the LHC@home message board.
[2026-03-04 08:09:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 08:09:51] Checking for apptainer binary...
[2026-03-04 08:09:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 08:09:51] Running /usr/bin/apptainer --version
[2026-03-04 08:09:51] apptainer version 1.4.1-1.1
[2026-03-04 08:09:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 08:09:51] thA381
[2026-03-04 08:09:51] apptainer works
[2026-03-04 08:09:51] Set ATHENA_PROC_NUMBER=4
[2026-03-04 08:09:51] Set ATHENA_CORE_NUMBER=4
[2026-03-04 08:09:51] Starting ATLAS job with PandaID=7038490108
[2026-03-04 08:09:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 08:17:10]  *** The last 200 lines of the pilot log: ***
[2026-03-04 08:17:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 08:17:10] ANSI_COLOR="0;31"
[2026-03-04 08:17:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 08:17:10] HOME_URL="https://www.centos.org/"
[2026-03-04 08:17:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 08:17:10] 
[2026-03-04 08:17:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 08:17:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 08:17:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 08:17:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 08:17:10] 
[2026-03-04 08:17:10] 2026-03-04 07:16:11,944 | INFO     | **************************************
[2026-03-04 08:17:10] 2026-03-04 07:16:12,447 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-03-04 08:17:10] 2026-03-04 07:16:12,466 | INFO     | sufficient remaining disk space (232840495104 B)
[2026-03-04 08:17:10] 2026-03-04 07:16:12,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 08:17:10] 2026-03-04 07:16:12,466 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 08:17:10] 2026-03-04 07:16:12,466 | INFO     | update_server=False
[2026-03-04 08:17:10] 2026-03-04 07:16:12,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 08:17:10] 2026-03-04 07:16:12,466 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 08:17:10] 2026-03-04 07:16:12,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:17:10] 2026-03-04 07:16:12,718 | INFO     | all job control threads have been joined
[2026-03-04 08:17:10] 2026-03-04 07:16:12,802 | INFO     | all data control threads have been joined
[2026-03-04 08:17:10] 2026-03-04 07:16:12,920 | INFO     | all payload control threads have been joined
[2026-03-04 08:17:10] 2026-03-04 07:16:13,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:17:10] 2026-03-04 07:16:13,197 | INFO     | aborting loop
[2026-03-04 08:17:10] 2026-03-04 07:16:13,472 | INFO     | [job] retrieve thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:13,472 | INFO     | [job] queue monitor thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:13,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 08:17:10] 2026-03-04 07:16:13,594 | INFO     | [data] copytool_in thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:13,724 | INFO     | [job] control thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:13,796 | INFO     | [payload] failed_post thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:13,808 | INFO     | [data] control thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:13,926 | INFO     | [payload] control thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:14,008 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:14,203 | INFO     | [job] job monitor thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:14,769 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:14,793 | INFO     | [job] validate thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:14,861 | INFO     | [payload] validate_post thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:14,898 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:14,952 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:15,578 | INFO     | [data] copytool_out thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:16,473 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 08:17:10] 2026-03-04 07:16:43,493 | INFO     | PID=1578030 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 08:17:10] 2026-03-04 07:16:43,493 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 08:17:10] 2026-03-04 07:16:43,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 08:17:10] 2026-03-04 07:16:43,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 08:17:10] 2026-03-04 07:17:03,745 | INFO     | [monitor] cgroup control has ended
[2026-03-04 08:17:10] 2026-03-04 07:17:04,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140433338197824)>', '<ExcThread(monitor, started 140432293992192)>']
[2026-03-04 08:17:10] 2026-03-04 07:17:05,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 08:17:10] 2026-03-04 07:17:05,605 | INFO     | [monitor] control thread has ended
[2026-03-04 08:17:10] 2026-03-04 07:17:09,972 | INFO     | all workflow threads have been joined
[2026-03-04 08:17:10] 2026-03-04 07:17:09,972 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 08:17:10] 2026-03-04 07:17:09,972 | INFO     | traces error code: 0
[2026-03-04 08:17:10] 2026-03-04 07:17:09,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 08:17:10] 2026-03-04 07:17:10,053 [wrapper] ==== pilot stdout END ====
[2026-03-04 08:17:10] 2026-03-04 07:17:10,057 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 08:17:10] 2026-03-04 07:17:10,061 [wrapper] pilotpid: 1578030
[2026-03-04 08:17:10] 2026-03-04 07:17:10,066 [wrapper] Pilot exit status: 0
[2026-03-04 08:17:10] 2026-03-04 07:17:10,077 [wrapper] pandaids: 7038490108
[2026-03-04 08:17:10] 2026-03-04 07:17:10,100 [wrapper] cleanup supervisor_pilot 1578036 1578031
[2026-03-04 08:17:10] 2026-03-04 07:17:10,104 [wrapper] Test setup, not cleaning
[2026-03-04 08:17:10] 2026-03-04 07:17:10,108 [wrapper] apfmon messages muted
[2026-03-04 08:17:10] 2026-03-04 07:17:10,112 [wrapper] ==== wrapper stdout END ====
[2026-03-04 08:17:10] 2026-03-04 07:17:10,116 [wrapper] ==== wrapper stderr END ====
[2026-03-04 08:17:10]  *** Error codes and diagnostics ***
[2026-03-04 08:17:10]     "exeErrorCode": 65,
[2026-03-04 08:17:10]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2026-03-04 08:17:10]     "pilotErrorCode": 1305,
[2026-03-04 08:17:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
[2026-03-04 08:17:10]  *** Listing of results directory ***
[2026-03-04 08:17:10] total 431524
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-04 08:17:10] -rwx------ 1 boinc boinc     36322 Mar  3 14:56 runpilot2-wrapper.sh
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc      5111 Mar  3 14:58 queuedata.json
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc       100 Mar  4 08:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 08:17:10] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 08:09 run_atlas
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc       105 Mar  4 08:09 job.xml
[2026-03-04 08:17:10] -rw-r--r-- 2 boinc boinc 437592321 Mar  4 08:09 EVNT.46701403._001010.pool.root.1
[2026-03-04 08:17:10] -rw-r--r-- 2 boinc boinc    597945 Mar  4 08:09 input.tar.gz
[2026-03-04 08:17:10] -rw-r--r-- 2 boinc boinc     15845 Mar  4 08:09 start_atlas.sh
[2026-03-04 08:17:10] drwxrwx--x 2 boinc boinc      4096 Mar  4 08:09 shared
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc         0 Mar  4 08:09 boinc_setup_complete
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc      6377 Mar  4 08:09 init_data.xml
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc         0 Mar  4 08:09 boinc_lockfile
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc      2561 Mar  4 08:09 pandaJob.out
[2026-03-04 08:17:10] -rw------- 1 boinc boinc    997749 Mar  4 08:09 agis_schedconf.cvmfs.json
[2026-03-04 08:17:10] -rw------- 1 boinc boinc   1516092 Mar  4 08:09 agis_ddmendpoints.agis.ALL.json
[2026-03-04 08:17:10] -rw------- 1 boinc boinc       427 Mar  4 08:10 workernode_map.json
[2026-03-04 08:17:10] drwx------ 5 boinc boinc      4096 Mar  4 08:10 pilot3
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc       525 Mar  4 08:13 boinc_task_state.xml
[2026-03-04 08:17:10] -rw------- 1 boinc boinc      1007 Mar  4 08:14 memory_monitor_summary.json
[2026-03-04 08:17:10] -rw------- 1 boinc boinc     73903 Mar  4 08:14 log.48955010._000486.job.log.tgz.1
[2026-03-04 08:17:10] -rw------- 1 boinc boinc        95 Mar  4 08:16 pilot_heartbeat.json
[2026-03-04 08:17:10] -rw------- 1 boinc boinc      7992 Mar  4 08:16 heartbeat.json
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc      8192 Mar  4 08:17 boinc_mmap_file
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc        23 Mar  4 08:17 wrapper_checkpoint.txt
[2026-03-04 08:17:10] -rw------- 1 boinc boinc      4748 Mar  4 08:17 pilotlog.txt
[2026-03-04 08:17:10] -rw------- 1 boinc boinc    108659 Mar  4 08:17 log.48955010._000486.job.log.1
[2026-03-04 08:17:10] -rw------- 1 boinc boinc       188 Mar  4 08:17 output.list
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc       620 Mar  4 08:17 runtime_log
[2026-03-04 08:17:10] -rw------- 1 boinc boinc    204800 Mar  4 08:17 result.tar.gz
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc      8743 Mar  4 08:17 runtime_log.err
[2026-03-04 08:17:10] -rw------- 1 boinc boinc       649 Mar  4 08:17 CHXMDmPPfH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPlELDmB5EoGm.diag
[2026-03-04 08:17:10] -rw-r--r-- 1 boinc boinc      8944 Mar  4 08:17 stderr.txt
[2026-03-04 08:17:10] No HITS result produced
[2026-03-04 08:17:10]  *** Contents of shared directory: ***
[2026-03-04 08:17:10] total 428144
[2026-03-04 08:17:10] -rw-r--r-- 2 boinc boinc 437592321 Mar  4 08:09 ATLAS.root_0
[2026-03-04 08:17:10] -rw-r--r-- 2 boinc boinc    597945 Mar  4 08:09 input.tar.gz
[2026-03-04 08:17:10] -rw-r--r-- 2 boinc boinc     15845 Mar  4 08:09 start_atlas.sh
[2026-03-04 08:17:10] -rw------- 1 boinc boinc    204800 Mar  4 08:17 result.tar.gz
08:17:11 (1573903): run_atlas exited; CPU time 88.569477
08:17:11 (1573903): called boinc_finish(0)

</stderr_txt>
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