Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:52:56 (2502476): wrapper (7.7.26015): starting
06:52:56 (2502476): wrapper: running run_atlas (--nthreads 12)
[2026-03-04 06:52:56] Arguments: --nthreads 12
[2026-03-04 06:52:56] Threads: 12
[2026-03-04 06:52:56] Checking for CVMFS
[2026-03-04 06:52:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 06:52:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 06:52:57] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 06:52:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 06:52:58] 2.13.3.0 3760440 11412 254716 156871 3 503 36177105 46080000 25648 130560 0 35264770 99.864 11959340 27541 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-04 06:52:58] CVMFS is ok
[2026-03-04 06:52:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 06:52:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 06:52:58] Further information can be found at the LHC@home message board.
[2026-03-04 06:52:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 06:52:58] Checking for apptainer binary...
[2026-03-04 06:52:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 06:52:58] Running /usr/bin/apptainer --version
[2026-03-04 06:52:58] apptainer version 1.4.5-2.el9
[2026-03-04 06:52:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 06:52:59] mff2104.farm.particle.cz
[2026-03-04 06:52:59] apptainer works
[2026-03-04 06:52:59] Set ATHENA_PROC_NUMBER=12
[2026-03-04 06:52:59] Set ATHENA_CORE_NUMBER=12
[2026-03-04 06:52:59] Starting ATLAS job with PandaID=7038486939
[2026-03-04 06:52:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 10:02:40]  *** The last 200 lines of the pilot log: ***
[2026-03-04 10:02:40]  is_altstaged=None
[2026-03-04 10:02:40]  is_tar=False
[2026-03-04 10:02:40]  lfn=log.48955006._000179.job.log.tgz.1
[2026-03-04 10:02:40]  mtime=0
[2026-03-04 10:02:40]  protocol_id=None
[2026-03-04 10:02:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 10:02:40]  replicas=None
[2026-03-04 10:02:40]  scope=mc23_13p6TeV
[2026-03-04 10:02:40]  status=None
[2026-03-04 10:02:40]  status_code=0
[2026-03-04 10:02:40]  storage_token=
[2026-03-04 10:02:40]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-7038486939/log.48955006._000179.job.log.tgz.1
[2026-03-04 10:02:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/67/log.48955006._000179.job.log.tgz.1
[2026-03-04 10:02:40]  workdir=None
[2026-03-04 10:02:40] ]
[2026-03-04 10:02:40] 2026-03-04 07:34:12,830 | INFO     | transferring file log.48955006._000179.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-7038486939/log.48955006._000179.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-04 10:02:40] 2026-03-04 07:34:12,830 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-7038486939/log.48955006._000179.job.log.tgz.1 /scratch/.boinc/slots/5/log.48955006._000179.j
[2026-03-04 10:02:40] 2026-03-04 07:34:12,863 | INFO     | adding to output.list: log.48955006._000179.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5a/67/log.48955006._000179.job.log.tg
[2026-03-04 10:02:40] 2026-03-04 07:34:12,864 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 10:02:40] 2026-03-04 07:34:12,864 | INFO     | summary of transferred files:
[2026-03-04 10:02:40] 2026-03-04 07:34:12,865 | INFO     |  -- lfn=log.48955006._000179.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 10:02:40] 2026-03-04 07:34:12,865 | INFO     | stage-out finished correctly
[2026-03-04 10:02:40] 2026-03-04 07:34:13,244 | INFO     | time since job start (5937s) is within the limit (349056.0s)
[2026-03-04 10:02:40] 2026-03-04 07:34:14,245 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 10:02:40] 2026-03-04 07:34:15,255 | INFO     | time since job start (5939s) is within the limit (349056.0s)
[2026-03-04 10:02:40] 2026-03-04 07:34:16,927 | INFO     | job 7038486939 has state=finished
[2026-03-04 10:02:40] 2026-03-04 07:34:16,927 | INFO     | preparing for final server update for job 7038486939 in state='finished'
[2026-03-04 10:02:40] 2026-03-04 07:34:16,927 | INFO     | reading metadata from: /scratch/.boinc/slots/5/PanDA_Pilot-7038486939/jobReport.json
[2026-03-04 10:02:40] 2026-03-04 07:34:16,931 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/5/workernode_map.json
[2026-03-04 10:02:40] 2026-03-04 07:34:16,931 | INFO     | this job has now completed (state=finished)
[2026-03-04 10:02:40] 2026-03-04 07:34:16,931 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 10:02:40] 2026-03-04 07:34:16,931 | INFO     | log transfer has been attempted: DONE
[2026-03-04 10:02:40] 2026-03-04 07:34:16,931 | INFO     | job 7038486939 has finished - writing final server update
[2026-03-04 10:02:40] 2026-03-04 07:34:16,932 | INFO     | total number of processed events: 400 (read)
[2026-03-04 10:02:40] 2026-03-04 07:34:16,951 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-7038486939/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 10:02:40] 2026-03-04 07:34:16,951 | INFO     | extracted standard info from prmon json
[2026-03-04 10:02:40] 2026-03-04 07:34:16,951 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 10:02:40] 2026-03-04 07:34:16,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 10:02:40] 2026-03-04 07:34:16,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 10:02:40] 2026-03-04 07:34:16,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 10:02:40] 2026-03-04 07:34:16,954 | INFO     | fitting pss+swap vs Time
[2026-03-04 10:02:40] 2026-03-04 07:34:16,955 | INFO     | sum of square deviations: 218553253.75280887
[2026-03-04 10:02:40] 2026-03-04 07:34:16,955 | INFO     | sum of deviations: 4459290898.662918
[2026-03-04 10:02:40] 2026-03-04 07:34:16,955 | INFO     | mean x: 1772606811.1910112
[2026-03-04 10:02:40] 2026-03-04 07:34:16,955 | INFO     | mean y: 2665332.0786516853
[2026-03-04 10:02:40] 2026-03-04 07:34:16,955 | INFO     | intersect: -36165038805.569695
[2026-03-04 10:02:40] 2026-03-04 07:34:16,956 | INFO     | chi2: 0.0926310922632422
[2026-03-04 10:02:40] 2026-03-04 07:34:16,956 | INFO     | current memory leak: 20.40 B/s (using 89 data points, chi2=0.09)
[2026-03-04 10:02:40] 2026-03-04 07:34:16,956 | INFO     | could have reported an average CPU frequency of 2676 MHz (7 samples)
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | ..............................
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . Timing measurements:
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . get job = 0 s
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . initial setup = 46 s
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . payload setup = 56 s
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . stage-in = 0 s
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . payload execution = 5873 s
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . stage-out = 0 s
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | . log creation = 0 s
[2026-03-04 10:02:40] 2026-03-04 07:34:16,957 | INFO     | ..............................
[2026-03-04 10:02:40] 2026-03-04 07:34:17,056 | INFO     | 
[2026-03-04 10:02:40] 2026-03-04 07:34:17,056 | INFO     | job summary report
[2026-03-04 10:02:40] 2026-03-04 07:34:17,056 | INFO     | --------------------------------------------------
[2026-03-04 10:02:40] 2026-03-04 07:34:17,056 | INFO     | PanDA job id: 7038486939
[2026-03-04 10:02:40] 2026-03-04 07:34:17,056 | INFO     | task id: 48955006
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | errors: (none)
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | pilot state: finished 
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | transexitcode: 0
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | exeerrorcode: 0
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | exeerrordiag: 
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | exitcode: 0
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | exitmsg: OK
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | cpuconsumptiontime: 38619 s
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | nevents: 400
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | neventsw: 0
[2026-03-04 10:02:40] 2026-03-04 07:34:17,057 | INFO     | pid: 2539559
[2026-03-04 10:02:40] 2026-03-04 07:34:17,058 | INFO     | pgrp: 2539559
[2026-03-04 10:02:40] 2026-03-04 07:34:17,058 | INFO     | corecount: 12
[2026-03-04 10:02:40] 2026-03-04 07:34:17,058 | INFO     | event service: False
[2026-03-04 10:02:40] 2026-03-04 07:34:17,058 | INFO     | sizes: {0: 2286624, 1: 2287085, 2: 2287085, 5933: 2314072, 5934: 2323072, 5936: 2323128, 5938: 2323450}
[2026-03-04 10:02:40] 2026-03-04 07:34:17,058 | INFO     | --------------------------------------------------
[2026-03-04 10:02:40] 2026-03-04 07:34:17,058 | INFO     | 
[2026-03-04 10:02:40] 2026-03-04 07:34:17,058 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-03-04 10:02:40] 2026-03-04 07:34:17,087 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,088 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,088 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,088 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,088 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,088 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,088 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,088 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 10:02:40] 2026-03-04 07:34:17,089 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,090 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 10:02:40] 2026-03-04 07:34:17,090 | INFO     | job 7038486939 has completed (purged errors)
[2026-03-04 10:02:40] 2026-03-04 07:34:17,090 | INFO     | overall cleanup function is called
[2026-03-04 10:02:40] 2026-03-04 07:34:18,101 | INFO     | --- collectZombieJob: --- 10, [2539559]
[2026-03-04 10:02:40] 2026-03-04 07:34:18,102 | INFO     | zombie collector waiting for pid 2539559
[2026-03-04 10:02:40] 2026-03-04 07:34:18,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 10:02:40] 2026-03-04 07:34:18,102 | INFO     | collected zombie processes
[2026-03-04 10:02:40] 2026-03-04 07:34:18,102 | INFO     | will attempt to kill all subprocesses of pid=2539559
[2026-03-04 10:02:40] 2026-03-04 07:34:18,522 | WARNING  | process 2539559 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 10:02:40] 2026-03-04 07:34:19,391 | INFO     | process IDs to be killed: [2539559] (in reverse order)
[2026-03-04 10:02:40] 2026-03-04 07:34:19,435 | INFO     | using path: /scratch/.boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 10:02:40] 2026-03-04 07:34:19,575 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 10:02:40] 2026-03-04 07:34:19,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 10:02:40] 2026-03-04 07:34:19,617 | INFO     | did not find any defunct processes belonging to 2539559
[2026-03-04 10:02:40] 2026-03-04 07:34:19,661 | INFO     | did not find any defunct processes belonging to 2539559
[2026-03-04 10:02:40] 2026-03-04 07:34:19,662 | INFO     | ready for new job
[2026-03-04 10:02:40] 2026-03-04 07:34:19,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 10:02:40] 2026-03-04 07:34:19,665 | INFO     | **************************************
[2026-03-04 10:02:40] 2026-03-04 07:34:19,665 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 10:02:40] 2026-03-04 07:34:19,665 | INFO     | **************************************
[2026-03-04 10:02:40] 2026-03-04 07:34:19,665 | INFO     | 
[2026-03-04 10:02:40] 2026-03-04 07:34:19,673 | INFO     | architecture information:
[2026-03-04 10:02:40] 2026-03-04 07:34:19,674 | INFO     | executing command: cat /etc/os-release
[2026-03-04 10:02:40] 2026-03-04 07:34:19,704 | INFO     | cat /etc/os-release:
[2026-03-04 10:02:40] NAME="CentOS Linux"
[2026-03-04 10:02:40] VERSION="7 (Core)"
[2026-03-04 10:02:40] ID="centos"
[2026-03-04 10:02:40] ID_LIKE="rhel fedora"
[2026-03-04 10:02:40] VERSION_ID="7"
[2026-03-04 10:02:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 10:02:40] ANSI_COLOR="0;31"
[2026-03-04 10:02:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 10:02:40] HOME_URL="https://www.centos.org/"
[2026-03-04 10:02:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 10:02:40] 
[2026-03-04 10:02:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 10:02:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 10:02:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 10:02:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 10:02:40] 
[2026-03-04 10:02:40] 2026-03-04 07:34:19,704 | INFO     | **************************************
[2026-03-04 10:02:40] 2026-03-04 07:34:20,005 | INFO     | number of running child processes to parent process 2539559: 1
[2026-03-04 10:02:40] 2026-03-04 07:34:20,005 | INFO     | maximum number of monitored processes: 6
[2026-03-04 10:02:40] 2026-03-04 07:34:20,005 | INFO     | aborting job monitoring since job object (job id=7038486939) has expired
[2026-03-04 10:02:40] 2026-03-04 07:34:20,207 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-03-04 10:02:40] 2026-03-04 07:34:20,234 | INFO     | sufficient remaining disk space (1464711774208 B)
[2026-03-04 10:02:40] 2026-03-04 07:34:20,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 10:02:40] 2026-03-04 07:34:20,235 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 10:02:40] 2026-03-04 07:34:20,235 | INFO     | update_server=False
[2026-03-04 10:02:40] 2026-03-04 07:34:20,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 10:02:40] 2026-03-04 07:34:20,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:02:40] 2026-03-04 07:34:20,236 | INFO     | will abort loop
[2026-03-04 10:02:40] 2026-03-04 07:34:20,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 10:02:40] 2026-03-04 07:34:20,355 | INFO     | all data control threads have been joined
[2026-03-04 10:02:40] 2026-03-04 07:34:20,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 10:02:40] 2026-03-04 07:34:21,241 | INFO     | [job] retrieve thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:21,241 | INFO     | [job] job monitor thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:21,251 | INFO     | [data] copytool_in thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:21,360 | INFO     | [data] control thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:21,464 | INFO     | all payload control threads have been joined
[2026-03-04 10:02:40] 2026-03-04 07:34:21,588 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:21,606 | INFO     | [job] validate thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:21,849 | INFO     | all job control threads have been joined
[2026-03-04 10:02:40] 2026-03-04 07:34:22,006 | INFO     | [payload] failed_post thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:22,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:02:40] 2026-03-04 07:34:22,123 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:22,340 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:22,367 | INFO     | [payload] validate_post thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:22,470 | INFO     | [payload] control thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:22,855 | INFO     | [job] control thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:22,990 | INFO     | [data] copytool_out thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:23,075 | INFO     | [job] queue monitor thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:24,352 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:26,064 | INFO     | [monitor] cgroup control has ended
[2026-03-04 10:02:40] 2026-03-04 07:34:30,445 | INFO     | job.realtimelogging is not enabled
[2026-03-04 10:02:40] 2026-03-04 07:34:31,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 10:02:40] 2026-03-04 07:34:31,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139694459873088)>', '<ExcThread(monitor, started 139694012626688)>']
[2026-03-04 10:02:40] 2026-03-04 07:34:36,775 | INFO     | all workflow threads have been joined
[2026-03-04 10:02:40] 2026-03-04 07:34:36,776 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 10:02:40] 2026-03-04 07:34:36,776 | INFO     | traces error code: 0
[2026-03-04 10:02:40] 2026-03-04 07:34:36,776 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 10:02:40] 2026-03-04 07:34:48,949 | INFO     | PID=2519076 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-04 10:02:40] 2026-03-04 07:34:48,950 | INFO     | .. there are 25 such processes running
[2026-03-04 10:02:40] 2026-03-04 07:34:48,950 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 10:02:40] 2026-03-04 07:34:48,950 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 10:02:40] 2026-03-04 07:34:48,950 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 10:02:40] 2026-03-04 07:34:48,950 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 10:02:40] 2026-03-04 07:34:48,950 | INFO     | [monitor] control thread has ended
[2026-03-04 10:02:40] 2026-03-04 07:34:49,105 [wrapper] ==== pilot stdout END ====
[2026-03-04 10:02:40] 2026-03-04 07:34:49,110 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 10:02:40] 2026-03-04 07:34:49,114 [wrapper] pilotpid: 2519076
[2026-03-04 10:02:40] 2026-03-04 07:34:49,119 [wrapper] Pilot exit status: 0
[2026-03-04 10:02:40] 2026-03-04 07:34:49,134 [wrapper] pandaids: 7038486939
[2026-03-04 10:02:40] 2026-03-04 07:34:49,263 [wrapper] cleanup supervisor_pilot 2638878 2519077
[2026-03-04 10:02:40] 2026-03-04 07:34:49,269 [wrapper] Test setup, not cleaning
[2026-03-04 10:02:40] 2026-03-04 07:34:49,274 [wrapper] apfmon messages muted
[2026-03-04 10:02:40] 2026-03-04 07:34:49,278 [wrapper] ==== wrapper stdout END ====
[2026-03-04 10:02:40] 2026-03-04 07:34:49,284 [wrapper] ==== wrapper stderr END ====
[2026-03-04 10:02:40]  *** Error codes and diagnostics ***
[2026-03-04 10:02:40]     "exeErrorCode": 0,
[2026-03-04 10:02:40]     "exeErrorDiag": "",
[2026-03-04 10:02:40]     "pilotErrorCode": 0,
[2026-03-04 10:02:40]     "pilotErrorDiag": "",
[2026-03-04 10:02:40]  *** Listing of results directory ***
[2026-03-04 10:02:40] total 619108
[2026-03-04 10:02:40] -rwx------ 1 boinc boinc     36322 Mar  3 14:54 runpilot2-wrapper.sh
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc      5111 Mar  3 14:54 queuedata.json
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc       100 Mar  4 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 10:02:40] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 06:52 run_atlas
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc       105 Mar  4 06:52 job.xml
[2026-03-04 10:02:40] -rw-r--r-- 2 boinc boinc 441061023 Mar  4 06:52 EVNT.46701403._000004.pool.root.1
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc      6677 Mar  4 06:52 init_data.xml
[2026-03-04 10:02:40] -rw-r--r-- 2 boinc boinc     15845 Mar  4 06:52 start_atlas.sh
[2026-03-04 10:02:40] drwxrwx--x 2 boinc boinc      4096 Mar  4 06:52 shared
[2026-03-04 10:02:40] -rw-r--r-- 2 boinc boinc    597928 Mar  4 06:52 input.tar.gz
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc         0 Mar  4 06:52 boinc_lockfile
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc      2558 Mar  4 06:52 pandaJob.out
[2026-03-04 10:02:40] -rw------- 1 boinc boinc    997749 Mar  4 06:54 agis_schedconf.cvmfs.json
[2026-03-04 10:02:40] -rw------- 1 boinc boinc   1516092 Mar  4 06:54 agis_ddmendpoints.agis.ALL.json
[2026-03-04 10:02:40] -rw------- 1 boinc boinc       436 Mar  4 06:55 workernode_map.json
[2026-03-04 10:02:40] drwx------ 5 boinc boinc      4096 Mar  4 06:55 pilot3
[2026-03-04 10:02:40] -rw------- 1 boinc boinc 186454960 Mar  4 08:33 HITS.48955006._000179.pool.root.1
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc       529 Mar  4 08:33 boinc_task_state.xml
[2026-03-04 10:02:40] -rw------- 1 boinc boinc        95 Mar  4 08:34 pilot_heartbeat.json
[2026-03-04 10:02:40] -rw------- 1 boinc boinc      1021 Mar  4 08:34 memory_monitor_summary.json
[2026-03-04 10:02:40] -rw------- 1 boinc boinc    423761 Mar  4 08:34 log.48955006._000179.job.log.tgz.1
[2026-03-04 10:02:40] -rw------- 1 boinc boinc      6335 Mar  4 08:34 heartbeat.json
[2026-03-04 10:02:40] -rw------- 1 boinc boinc       824 Mar  4 08:34 pilotlog.txt
[2026-03-04 10:02:40] -rw------- 1 boinc boinc    834603 Mar  4 08:34 log.48955006._000179.job.log.1
[2026-03-04 10:02:40] -rw------- 1 boinc boinc       357 Mar  4 08:34 output.list
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc       620 Mar  4 08:34 runtime_log
[2026-03-04 10:02:40] -rw------- 1 boinc boinc   1280000 Mar  4 08:34 result.tar.gz
[2026-03-04 10:02:40] -rw------- 1 boinc boinc       663 Mar  4 08:34 zRrLDmHOfH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmpnGLDmDll0Uo.diag
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc      8879 Mar  4 08:34 runtime_log.err
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc        26 Mar  4 10:02 wrapper_checkpoint.txt
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc      8192 Mar  4 10:02 boinc_mmap_file
[2026-03-04 10:02:40] -rw-r--r-- 1 boinc boinc     21523 Mar  4 10:02 stderr.txt
[2026-03-04 10:02:40] HITS file was successfully produced:
[2026-03-04 10:02:40] -rw------- 1 boinc boinc 186454960 Mar  4 08:33 shared/HITS.pool.root.1
[2026-03-04 10:02:40]  *** Contents of shared directory: ***
[2026-03-04 10:02:40] total 614672
[2026-03-04 10:02:40] -rw-r--r-- 2 boinc boinc 441061023 Mar  4 06:52 ATLAS.root_0
[2026-03-04 10:02:40] -rw-r--r-- 2 boinc boinc     15845 Mar  4 06:52 start_atlas.sh
[2026-03-04 10:02:40] -rw-r--r-- 2 boinc boinc    597928 Mar  4 06:52 input.tar.gz
[2026-03-04 10:02:40] -rw------- 1 boinc boinc 186454960 Mar  4 08:33 HITS.pool.root.1
[2026-03-04 10:02:40] -rw------- 1 boinc boinc   1280000 Mar  4 08:34 result.tar.gz
10:02:42 (2502476): run_atlas exited; CPU time 38818.248725
10:02:42 (2502476): called boinc_finish(0)

</stderr_txt>
]]>

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