Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:26:00 (12978): wrapper (7.7.26015): starting
12:26:00 (12978): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 12:26:00] Arguments: --nthreads 12
[2026-03-03 12:26:00] Threads: 12
[2026-03-03 12:26:00] Checking for CVMFS
[2026-03-03 12:26:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 12:26:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 12:26:00] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 12:26:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 12:26:00] 2.11.2.0 28623 420283 97808 156852 0 49 13483739 20275200 1 130560 4 181408322 99.951 23710253 17219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 12:26:00] CVMFS is ok
[2026-03-03 12:26:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 12:26:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 12:26:00] Further information can be found at the LHC@home message board.
[2026-03-03 12:26:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 12:26:00] Checking for apptainer binary...
[2026-03-03 12:26:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 12:26:00] Running /usr/bin/apptainer --version
[2026-03-03 12:26:00] apptainer version 1.3.2-1.el7
[2026-03-03 12:26:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 12:26:02] c-205-20.aglt2.org
[2026-03-03 12:26:02] apptainer works
[2026-03-03 12:26:02] Set ATHENA_PROC_NUMBER=12
[2026-03-03 12:26:02] Set ATHENA_CORE_NUMBER=12
[2026-03-03 12:26:02] Starting ATLAS job with PandaID=7036278309
[2026-03-03 12:26:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 13:53:35]  *** The last 200 lines of the pilot log: ***
[2026-03-03 13:53:35]  direct_access_wan=False
[2026-03-03 13:53:35]  domain=
[2026-03-03 13:53:35]  filesize=397580
[2026-03-03 13:53:35]  filetype=log
[2026-03-03 13:53:35]  guid=3a87f8c7-d97e-4cb8-887a-fdc1416be68b
[2026-03-03 13:53:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-03 13:53:35]  is_altstaged=None
[2026-03-03 13:53:35]  is_tar=False
[2026-03-03 13:53:35]  lfn=log.48838581._005935.job.log.tgz.1
[2026-03-03 13:53:35]  mtime=0
[2026-03-03 13:53:35]  protocol_id=None
[2026-03-03 13:53:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 13:53:35]  replicas=None
[2026-03-03 13:53:35]  scope=mc23_13p6TeV
[2026-03-03 13:53:35]  status=None
[2026-03-03 13:53:35]  status_code=0
[2026-03-03 13:53:35]  storage_token=
[2026-03-03 13:53:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7036278309/log.48838581._005935.job.log.tgz.1
[2026-03-03 13:53:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/ee/log.48838581._005935.job.log.tgz.1
[2026-03-03 13:53:35]  workdir=None
[2026-03-03 13:53:35] ]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,026 | INFO     | transferring file log.48838581._005935.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7036278309/log.48838581._005935.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-03 13:53:35] 2026-03-03 18:52:55,026 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7036278309/log.48838581._005935.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838581._005935.job
[2026-03-03 13:53:35] 2026-03-03 18:52:55,049 | INFO     | adding to output.list: log.48838581._005935.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/ee/log.48838581._005935.job.log.tg
[2026-03-03 13:53:35] 2026-03-03 18:52:55,050 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 13:53:35] 2026-03-03 18:52:55,050 | INFO     | summary of transferred files:
[2026-03-03 13:53:35] 2026-03-03 18:52:55,050 | INFO     |  -- lfn=log.48838581._005935.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 13:53:35] 2026-03-03 18:52:55,051 | INFO     | stage-out finished correctly
[2026-03-03 13:53:35] 2026-03-03 18:52:55,134 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 13:53:35] 2026-03-03 18:52:55,214 | INFO     | job 7036278309 has state=finished
[2026-03-03 13:53:35] 2026-03-03 18:52:55,214 | INFO     | preparing for final server update for job 7036278309 in state='finished'
[2026-03-03 13:53:35] 2026-03-03 18:52:55,215 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036278309/jobReport.json
[2026-03-03 13:53:35] 2026-03-03 18:52:55,217 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 13:53:35] 2026-03-03 18:52:55,218 | INFO     | this job has now completed (state=finished)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,218 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,218 | INFO     | log transfer has been attempted: DONE
[2026-03-03 13:53:35] 2026-03-03 18:52:55,218 | INFO     | job 7036278309 has finished - writing final server update
[2026-03-03 13:53:35] 2026-03-03 18:52:55,218 | INFO     | total number of processed events: 400 (read)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,220 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036278309/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,221 | INFO     | extracted standard info from prmon json
[2026-03-03 13:53:35] 2026-03-03 18:52:55,221 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 13:53:35] 2026-03-03 18:52:55,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 13:53:35] 2026-03-03 18:52:55,221 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 13:53:35] 2026-03-03 18:52:55,221 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 13:53:35] 2026-03-03 18:52:55,223 | INFO     | fitting pss+swap vs Time
[2026-03-03 13:53:35] 2026-03-03 18:52:55,223 | INFO     | sum of square deviations: 147126479.5
[2026-03-03 13:53:35] 2026-03-03 18:52:55,223 | INFO     | sum of deviations: -10167277724.0
[2026-03-03 13:53:35] 2026-03-03 18:52:55,223 | INFO     | mean x: 1772561458.5
[2026-03-03 13:53:35] 2026-03-03 18:52:55,224 | INFO     | mean y: 2886001.2564102565
[2026-03-03 13:53:35] 2026-03-03 18:52:55,224 | INFO     | intersect: 122496978789.14236
[2026-03-03 13:53:35] 2026-03-03 18:52:55,224 | INFO     | chi2: 0.11498256235572522
[2026-03-03 13:53:35] 2026-03-03 18:52:55,224 | INFO     | current memory leak: -69.11 B/s (using 78 data points, chi2=0.11)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,224 | INFO     | could have reported an average CPU frequency of 1695 MHz (6 samples)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | ..............................
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . Timing measurements:
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . get job = 0 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . initial setup = 7 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . payload setup = 7 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . stage-in = 0 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . payload execution = 5169 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . stage-out = 0 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | . log creation = 0 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,225 | INFO     | ..............................
[2026-03-03 13:53:35] 2026-03-03 18:52:55,303 | INFO     | 
[2026-03-03 13:53:35] 2026-03-03 18:52:55,303 | INFO     | job summary report
[2026-03-03 13:53:35] 2026-03-03 18:52:55,303 | INFO     | --------------------------------------------------
[2026-03-03 13:53:35] 2026-03-03 18:52:55,303 | INFO     | PanDA job id: 7036278309
[2026-03-03 13:53:35] 2026-03-03 18:52:55,304 | INFO     | task id: 48838581
[2026-03-03 13:53:35] 2026-03-03 18:52:55,304 | INFO     | errors: (none)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,304 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 13:53:35] 2026-03-03 18:52:55,304 | INFO     | pilot state: finished 
[2026-03-03 13:53:35] 2026-03-03 18:52:55,304 | INFO     | transexitcode: 0
[2026-03-03 13:53:35] 2026-03-03 18:52:55,304 | INFO     | exeerrorcode: 0
[2026-03-03 13:53:35] 2026-03-03 18:52:55,305 | INFO     | exeerrordiag: 
[2026-03-03 13:53:35] 2026-03-03 18:52:55,305 | INFO     | exitcode: 0
[2026-03-03 13:53:35] 2026-03-03 18:52:55,305 | INFO     | exitmsg: OK
[2026-03-03 13:53:35] 2026-03-03 18:52:55,305 | INFO     | cpuconsumptiontime: 55725 s
[2026-03-03 13:53:35] 2026-03-03 18:52:55,305 | INFO     | nevents: 400
[2026-03-03 13:53:35] 2026-03-03 18:52:55,305 | INFO     | neventsw: 0
[2026-03-03 13:53:35] 2026-03-03 18:52:55,305 | INFO     | pid: 21079
[2026-03-03 13:53:35] 2026-03-03 18:52:55,306 | INFO     | pgrp: 21079
[2026-03-03 13:53:35] 2026-03-03 18:52:55,306 | INFO     | corecount: 12
[2026-03-03 13:53:35] 2026-03-03 18:52:55,306 | INFO     | event service: False
[2026-03-03 13:53:35] 2026-03-03 18:52:55,306 | INFO     | sizes: {0: 2286666, 1: 2287127, 11: 2287127, 5180: 2313408, 5181: 2313407, 5182: 2322783}
[2026-03-03 13:53:35] 2026-03-03 18:52:55,306 | INFO     | --------------------------------------------------
[2026-03-03 13:53:35] 2026-03-03 18:52:55,306 | INFO     | 
[2026-03-03 13:53:35] 2026-03-03 18:52:55,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 13:53:35] 2026-03-03 18:52:55,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,330 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,330 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,330 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,331 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,331 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,331 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,331 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,332 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,332 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,332 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,332 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,333 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 13:53:35] 2026-03-03 18:52:55,333 | INFO     | job 7036278309 has completed (purged errors)
[2026-03-03 13:53:35] 2026-03-03 18:52:55,333 | INFO     | overall cleanup function is called
[2026-03-03 13:53:35] 2026-03-03 18:52:56,341 | INFO     | --- collectZombieJob: --- 10, [21079]
[2026-03-03 13:53:35] 2026-03-03 18:52:56,342 | INFO     | zombie collector waiting for pid 21079
[2026-03-03 13:53:35] 2026-03-03 18:52:56,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 13:53:35] 2026-03-03 18:52:56,342 | INFO     | collected zombie processes
[2026-03-03 13:53:35] 2026-03-03 18:52:56,342 | INFO     | will attempt to kill all subprocesses of pid=21079
[2026-03-03 13:53:35] 2026-03-03 18:52:56,436 | INFO     | process IDs to be killed: [21079] (in reverse order)
[2026-03-03 13:53:35] 2026-03-03 18:52:56,493 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 13:53:35] 2026-03-03 18:52:56,494 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 13:53:35] 2026-03-03 18:52:56,497 | INFO     | did not find any defunct processes belonging to 21079
[2026-03-03 13:53:35] 2026-03-03 18:52:56,500 | INFO     | did not find any defunct processes belonging to 21079
[2026-03-03 13:53:35] 2026-03-03 18:52:56,500 | INFO     | ready for new job
[2026-03-03 13:53:35] 2026-03-03 18:52:56,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 13:53:35] 2026-03-03 18:52:56,501 | INFO     | **************************************
[2026-03-03 13:53:35] 2026-03-03 18:52:56,502 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 13:53:35] 2026-03-03 18:52:56,502 | INFO     | **************************************
[2026-03-03 13:53:35] 2026-03-03 18:52:56,502 | INFO     | 
[2026-03-03 13:53:35] 2026-03-03 18:52:56,502 | INFO     | architecture information:
[2026-03-03 13:53:35] 2026-03-03 18:52:56,503 | INFO     | executing command: cat /etc/os-release
[2026-03-03 13:53:35] 2026-03-03 18:52:56,518 | INFO     | cat /etc/os-release:
[2026-03-03 13:53:35] NAME="CentOS Linux"
[2026-03-03 13:53:35] VERSION="7 (Core)"
[2026-03-03 13:53:35] ID="centos"
[2026-03-03 13:53:35] ID_LIKE="rhel fedora"
[2026-03-03 13:53:35] VERSION_ID="7"
[2026-03-03 13:53:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 13:53:35] ANSI_COLOR="0;31"
[2026-03-03 13:53:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 13:53:35] HOME_URL="https://www.centos.org/"
[2026-03-03 13:53:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 13:53:35] 
[2026-03-03 13:53:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 13:53:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 13:53:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 13:53:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 13:53:35] 
[2026-03-03 13:53:35] 2026-03-03 18:52:56,519 | INFO     | **************************************
[2026-03-03 13:53:35] 2026-03-03 18:52:57,022 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 13:53:35] 2026-03-03 18:52:57,039 | INFO     | sufficient remaining disk space (29160898560 B)
[2026-03-03 13:53:35] 2026-03-03 18:52:57,039 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 13:53:35] 2026-03-03 18:52:57,040 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 13:53:35] 2026-03-03 18:52:57,040 | INFO     | update_server=False
[2026-03-03 13:53:35] 2026-03-03 18:52:57,040 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 13:53:35] 2026-03-03 18:52:57,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 13:53:35] 2026-03-03 18:52:57,041 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:53:35] 2026-03-03 18:52:57,171 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-03 13:53:35] 2026-03-03 18:52:57,171 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-03 13:53:35] 2026-03-03 18:52:57,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 13:53:35] 2026-03-03 18:52:57,171 | INFO     | will abort loop
[2026-03-03 13:53:35] 2026-03-03 18:52:57,397 | INFO     | all job control threads have been joined
[2026-03-03 13:53:35] 2026-03-03 18:52:58,045 | INFO     | [job] retrieve thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:58,046 | INFO     | [job] queue monitor thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:58,089 | INFO     | all data control threads have been joined
[2026-03-03 13:53:35] 2026-03-03 18:52:58,127 | INFO     | all payload control threads have been joined
[2026-03-03 13:53:35] 2026-03-03 18:52:58,139 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 13:53:35] 2026-03-03 18:52:58,176 | INFO     | [job] job monitor thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:58,210 | INFO     | [data] copytool_in thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:58,402 | INFO     | [job] control thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:58,669 | INFO     | [payload] failed_post thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:58,684 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:59,092 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:59,095 | INFO     | [data] control thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:59,097 | INFO     | [job] validate thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:59,132 | INFO     | [payload] control thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:59,238 | INFO     | [payload] validate_post thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:52:59,266 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:53:00,145 | INFO     | [data] copytool_out thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:53:01,047 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:53:07,358 | INFO     | job.realtimelogging is not enabled
[2026-03-03 13:53:35] 2026-03-03 18:53:08,361 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 13:53:35] 2026-03-03 18:53:27,156 | INFO     | PID=16704 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-03 13:53:35] 2026-03-03 18:53:27,165 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 13:53:35] 2026-03-03 18:53:27,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 13:53:35] 2026-03-03 18:53:27,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 13:53:35] 2026-03-03 18:53:29,332 | INFO     | [monitor] cgroup control has ended
[2026-03-03 13:53:35] 2026-03-03 18:53:30,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139701695199040)>', '<ExcThread(monitor, started 139700522186496)>']
[2026-03-03 13:53:35] 2026-03-03 18:53:31,177 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 13:53:35] 2026-03-03 18:53:31,177 | INFO     | [monitor] control thread has ended
[2026-03-03 13:53:35] 2026-03-03 18:53:35,585 | INFO     | all workflow threads have been joined
[2026-03-03 13:53:35] 2026-03-03 18:53:35,585 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 13:53:35] 2026-03-03 18:53:35,585 | INFO     | traces error code: 0
[2026-03-03 13:53:35] 2026-03-03 18:53:35,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 13:53:35] 2026-03-03 18:53:35,680 [wrapper] ==== pilot stdout END ====
[2026-03-03 13:53:35] 2026-03-03 18:53:35,684 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 13:53:35] 2026-03-03 18:53:35,688 [wrapper] pilotpid: 16704
[2026-03-03 13:53:35] 2026-03-03 18:53:35,692 [wrapper] Pilot exit status: 0
[2026-03-03 13:53:35] 2026-03-03 18:53:35,707 [wrapper] pandaids: 7036278309
[2026-03-03 13:53:35] 2026-03-03 18:53:35,745 [wrapper] cleanup supervisor_pilot 11027 16705
[2026-03-03 13:53:35] 2026-03-03 18:53:35,749 [wrapper] Test setup, not cleaning
[2026-03-03 13:53:35] 2026-03-03 18:53:35,753 [wrapper] apfmon messages muted
[2026-03-03 13:53:35] 2026-03-03 18:53:35,756 [wrapper] ==== wrapper stdout END ====
[2026-03-03 13:53:35] 2026-03-03 18:53:35,760 [wrapper] ==== wrapper stderr END ====
[2026-03-03 13:53:35]  *** Error codes and diagnostics ***
[2026-03-03 13:53:35]     "exeErrorCode": 0,
[2026-03-03 13:53:35]     "exeErrorDiag": "",
[2026-03-03 13:53:35]     "pilotErrorCode": 0,
[2026-03-03 13:53:35]     "pilotErrorDiag": "",
[2026-03-03 13:53:35]  *** Listing of results directory ***
[2026-03-03 13:53:35] total 513368
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 06:44 pilot3.tar.gz
[2026-03-03 13:53:35] -rwx------ 1 boincer umatlas     36322 Mar  3 06:45 runpilot2-wrapper.sh
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 06:47 queuedata.json
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas       100 Mar  3 12:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 13:53:35] -rwxr-xr-x 1 boincer umatlas      7986 Mar  3 12:25 run_atlas
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas       105 Mar  3 12:25 job.xml
[2026-03-03 13:53:35] -rw-r--r-- 2 boincer umatlas 289630836 Mar  3 12:26 EVNT.48220205._000246.pool.root.1
[2026-03-03 13:53:35] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 12:26 start_atlas.sh
[2026-03-03 13:53:35] drwxrwx--x 2 boincer umatlas      4096 Mar  3 12:26 shared
[2026-03-03 13:53:35] -rw-r--r-- 2 boincer umatlas    597964 Mar  3 12:26 input.tar.gz
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas         0 Mar  3 12:26 boinc_lockfile
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas      2588 Mar  3 12:26 pandaJob.out
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas        57 Mar  3 12:26 setup.sh.local
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas    998508 Mar  3 12:26 agis_schedconf.cvmfs.json
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas   1516092 Mar  3 12:26 agis_ddmendpoints.agis.ALL.json
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas       445 Mar  3 12:26 workernode_map.json
[2026-03-03 13:53:35] drwx------ 5 boincer umatlas      4096 Mar  3 12:26 pilot3
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas      5953 Mar  3 13:46 init_data.xml
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas 229831266 Mar  3 13:52 HITS.48838581._005935.pool.root.1
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas       529 Mar  3 13:52 boinc_task_state.xml
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas      1046 Mar  3 13:52 memory_monitor_summary.json
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas    397580 Mar  3 13:52 log.48838581._005935.job.log.tgz.1
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas      6419 Mar  3 13:52 heartbeat.json
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas        95 Mar  3 13:53 pilot_heartbeat.json
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 13:53 boinc_mmap_file
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas        27 Mar  3 13:53 wrapper_checkpoint.txt
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas      5000 Mar  3 13:53 pilotlog.txt
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas    748030 Mar  3 13:53 log.48838581._005935.job.log.1
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas       357 Mar  3 13:53 output.list
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas       620 Mar  3 13:53 runtime_log
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas   1167360 Mar  3 13:53 result.tar.gz
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas      9343 Mar  3 13:53 runtime_log.err
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas       659 Mar  3 13:53 IHbKDm4MdH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmONELDmDWp8Kn.diag
[2026-03-03 13:53:35] -rw-r--r-- 1 boincer umatlas     20993 Mar  3 13:53 stderr.txt
[2026-03-03 13:53:35] HITS file was successfully produced:
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas 229831266 Mar  3 13:52 shared/HITS.pool.root.1
[2026-03-03 13:53:35]  *** Contents of shared directory: ***
[2026-03-03 13:53:35] total 509032
[2026-03-03 13:53:35] -rw-r--r-- 2 boincer umatlas 289630836 Mar  3 12:26 ATLAS.root_0
[2026-03-03 13:53:35] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 12:26 start_atlas.sh
[2026-03-03 13:53:35] -rw-r--r-- 2 boincer umatlas    597964 Mar  3 12:26 input.tar.gz
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas 229831266 Mar  3 13:52 HITS.pool.root.1
[2026-03-03 13:53:35] -rw------- 1 boincer umatlas   1167360 Mar  3 13:53 result.tar.gz
13:53:37 (12978): run_atlas exited; CPU time 55699.222968
13:53:37 (12978): called boinc_finish(0)

</stderr_txt>
]]>

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