Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:53:30 (1076844): wrapper (7.7.26015): starting
09:53:30 (1076844): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 09:53:30] Arguments: --nthreads 4
[2026-03-04 09:53:30] Threads: 4
[2026-03-04 09:53:30] Checking for CVMFS
[2026-03-04 09:53:30] No cvmfs_config command found, will try listing directly
[2026-03-04 09:53:30] CVMFS is ok
[2026-03-04 09:53:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 09:53:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 09:53:30] Further information can be found at the LHC@home message board.
[2026-03-04 09:53:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 09:53:30] Checking for apptainer binary...
[2026-03-04 09:53:30] which: no apptainer in ((null))
[2026-03-04 09:53:30] apptainer is not installed, using version from CVMFS
[2026-03-04 09:53:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 09:53:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-04 09:53:30] apptainer works
[2026-03-04 09:53:30] Set ATHENA_PROC_NUMBER=4
[2026-03-04 09:53:30] Set ATHENA_CORE_NUMBER=4
[2026-03-04 09:53:30] Starting ATLAS job with PandaID=7036296367
[2026-03-04 09:53:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 13:26:16]  *** The last 200 lines of the pilot log: ***
[2026-03-04 13:26:16] 2026-03-04 12:25:16,246 | INFO     | this job has now completed (state=finished)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,246 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,246 | INFO     | log transfer has been attempted: DONE
[2026-03-04 13:26:16] 2026-03-04 12:25:16,246 | INFO     | job 7036296367 has finished - writing final server update
[2026-03-04 13:26:16] 2026-03-04 12:25:16,246 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2220123/.job.ad'
[2026-03-04 13:26:16] 2026-03-04 12:25:16,247 | INFO     | total number of processed events: 400 (read)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,272 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7036296367/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,272 | INFO     | extracted standard info from prmon json
[2026-03-04 13:26:16] 2026-03-04 12:25:16,272 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 13:26:16] 2026-03-04 12:25:16,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 13:26:16] 2026-03-04 12:25:16,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 13:26:16] 2026-03-04 12:25:16,273 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 13:26:16] 2026-03-04 12:25:16,276 | INFO     | fitting pss+swap vs Time
[2026-03-04 13:26:16] 2026-03-04 12:25:16,277 | INFO     | sum of square deviations: 2790348132.0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,278 | INFO     | sum of deviations: 25403753475.0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,278 | INFO     | mean x: 1772620770.5
[2026-03-04 13:26:16] 2026-03-04 12:25:16,278 | INFO     | mean y: 2333722.2884615385
[2026-03-04 13:26:16] 2026-03-04 12:25:16,278 | INFO     | intersect: -16135875177.892797
[2026-03-04 13:26:16] 2026-03-04 12:25:16,278 | INFO     | chi2: 1.1772643273705234
[2026-03-04 13:26:16] 2026-03-04 12:25:16,279 | INFO     | sum of square deviations: 2593916542.0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,280 | INFO     | sum of deviations: 24510785332.999996
[2026-03-04 13:26:16] 2026-03-04 12:25:16,280 | INFO     | mean x: 1772620618.0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,280 | INFO     | mean y: 2333028.8374384237
[2026-03-04 13:26:16] 2026-03-04 12:25:16,280 | INFO     | intersect: -16747752311.667627
[2026-03-04 13:26:16] 2026-03-04 12:25:16,280 | INFO     | chi2: 1.1778525145214267
[2026-03-04 13:26:16] 2026-03-04 12:25:16,280 | INFO     | current chi2=1.1778525145214267 (change=-0.0499621994167611 %)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,281 | INFO     | right removable region: 202
[2026-03-04 13:26:16] 2026-03-04 12:25:16,281 | INFO     | sum of square deviations: 2593916542.0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,282 | INFO     | sum of deviations: 1360016899.0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,282 | INFO     | mean x: 1772620923.0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,282 | INFO     | mean y: 2352151.7783251232
[2026-03-04 13:26:16] 2026-03-04 12:25:16,282 | INFO     | intersect: -927051077.5723661
[2026-03-04 13:26:16] 2026-03-04 12:25:16,282 | INFO     | chi2: 0.005185533235973346
[2026-03-04 13:26:16] 2026-03-04 12:25:16,283 | INFO     | current chi2=0.005185533235973346 (change=99.55952685260111 %)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,283 | INFO     | sum of square deviations: 2406926989.5
[2026-03-04 13:26:16] 2026-03-04 12:25:16,284 | INFO     | sum of deviations: 1370479557.9999998
[2026-03-04 13:26:16] 2026-03-04 12:25:16,284 | INFO     | mean x: 1772621075.5
[2026-03-04 13:26:16] 2026-03-04 12:25:16,284 | INFO     | mean y: 2352138.121212121
[2026-03-04 13:26:16] 2026-03-04 12:25:16,284 | INFO     | intersect: -1006960133.7717465
[2026-03-04 13:26:16] 2026-03-04 12:25:16,284 | INFO     | chi2: 0.004973565724271061
[2026-03-04 13:26:16] 2026-03-04 12:25:16,284 | INFO     | current chi2=0.004973565724271061 (change=4.087670487420913 %)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,284 | INFO     | left removable region: 20
[2026-03-04 13:26:16] 2026-03-04 12:25:16,285 | INFO     | sum of square deviations: 1869302025.5
[2026-03-04 13:26:16] 2026-03-04 12:25:16,286 | INFO     | sum of deviations: 3116130862.4999995
[2026-03-04 13:26:16] 2026-03-04 12:25:16,286 | INFO     | mean x: 1772621197.5
[2026-03-04 13:26:16] 2026-03-04 12:25:16,286 | INFO     | mean y: 2349854.9175824174
[2026-03-04 13:26:16] 2026-03-04 12:25:16,286 | INFO     | intersect: -2952613840.4617
[2026-03-04 13:26:16] 2026-03-04 12:25:16,286 | INFO     | chi2: 0.0015617046816490555
[2026-03-04 13:26:16] 2026-03-04 12:25:16,286 | INFO     | current memory leak: 1.67 B/s (using 182 data points, chi2=0.00)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,286 | INFO     | could have reported an average CPU frequency of 2782 MHz (11 samples)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | ..............................
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . Timing measurements:
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . get job = 0 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . initial setup = 7 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . payload setup = 8 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . stage-in = 0 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . payload execution = 12660 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . stage-out = 1 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | . log creation = 0 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,287 | INFO     | ..............................
[2026-03-04 13:26:16] 2026-03-04 12:25:16,403 | WARNING  | process 1086570 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 13:26:16] 2026-03-04 12:25:16,404 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7036296367/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,469 | INFO     | 
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | job summary report
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | --------------------------------------------------
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | PanDA job id: 7036296367
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | task id: 48848507
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | errors: (none)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | pilot state: finished 
[2026-03-04 13:26:16] 2026-03-04 12:25:16,470 | INFO     | transexitcode: 0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | exeerrorcode: 0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | exeerrordiag: 
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | exitcode: 0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | exitmsg: OK
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | cpuconsumptiontime: 49080 s
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | nevents: 400
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | neventsw: 0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | pid: 1086570
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | pgrp: 1086570
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | corecount: 4
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | event service: False
[2026-03-04 13:26:16] 2026-03-04 12:25:16,471 | INFO     | sizes: {0: 2286769, 1: 2287173, 11: 2287173, 12672: 2317377, 12673: 2326453, 12674: 2326591}
[2026-03-04 13:26:16] 2026-03-04 12:25:16,472 | INFO     | --------------------------------------------------
[2026-03-04 13:26:16] 2026-03-04 12:25:16,472 | INFO     | 
[2026-03-04 13:26:16] 2026-03-04 12:25:16,472 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2026-03-04 13:26:16] 2026-03-04 12:25:16,503 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,503 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,503 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | job 7036296367 has completed (purged errors)
[2026-03-04 13:26:16] 2026-03-04 12:25:16,505 | INFO     | overall cleanup function is called
[2026-03-04 13:26:16] 2026-03-04 12:25:16,966 | INFO     | number of running child processes to parent process 1086570: 1
[2026-03-04 13:26:16] 2026-03-04 12:25:16,966 | INFO     | maximum number of monitored processes: 6
[2026-03-04 13:26:16] 2026-03-04 12:25:16,966 | INFO     | aborting job monitoring since job object (job id=7036296367) has expired
[2026-03-04 13:26:16] 2026-03-04 12:25:17,516 | INFO     | --- collectZombieJob: --- 10, [1086570]
[2026-03-04 13:26:16] 2026-03-04 12:25:17,519 | INFO     | zombie collector waiting for pid 1086570
[2026-03-04 13:26:16] 2026-03-04 12:25:17,519 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 13:26:16] 2026-03-04 12:25:17,519 | INFO     | collected zombie processes
[2026-03-04 13:26:16] 2026-03-04 12:25:17,519 | INFO     | will attempt to kill all subprocesses of pid=1086570
[2026-03-04 13:26:16] 2026-03-04 12:25:18,093 | INFO     | process IDs to be killed: [1086570] (in reverse order)
[2026-03-04 13:26:16] 2026-03-04 12:25:18,306 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 13:26:16] 2026-03-04 12:25:18,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 13:26:16] 2026-03-04 12:25:18,326 | INFO     | did not find any defunct processes belonging to 1086570
[2026-03-04 13:26:16] 2026-03-04 12:25:18,340 | INFO     | did not find any defunct processes belonging to 1086570
[2026-03-04 13:26:16] 2026-03-04 12:25:18,341 | INFO     | ready for new job
[2026-03-04 13:26:16] 2026-03-04 12:25:18,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 13:26:16] 2026-03-04 12:25:18,343 | INFO     | **************************************
[2026-03-04 13:26:16] 2026-03-04 12:25:18,343 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 13:26:16] 2026-03-04 12:25:18,344 | INFO     | **************************************
[2026-03-04 13:26:16] 2026-03-04 12:25:18,344 | INFO     | 
[2026-03-04 13:26:16] 2026-03-04 12:25:18,352 | INFO     | architecture information:
[2026-03-04 13:26:16] 2026-03-04 12:25:18,352 | INFO     | executing command: cat /etc/os-release
[2026-03-04 13:26:16] 2026-03-04 12:25:18,377 | INFO     | cat /etc/os-release:
[2026-03-04 13:26:16] NAME="CentOS Linux"
[2026-03-04 13:26:16] VERSION="7 (Core)"
[2026-03-04 13:26:16] ID="centos"
[2026-03-04 13:26:16] ID_LIKE="rhel fedora"
[2026-03-04 13:26:16] VERSION_ID="7"
[2026-03-04 13:26:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 13:26:16] ANSI_COLOR="0;31"
[2026-03-04 13:26:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 13:26:16] HOME_URL="https://www.centos.org/"
[2026-03-04 13:26:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 13:26:16] 
[2026-03-04 13:26:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 13:26:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 13:26:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 13:26:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 13:26:16] 
[2026-03-04 13:26:16] 2026-03-04 12:25:18,377 | INFO     | **************************************
[2026-03-04 13:26:16] 2026-03-04 12:25:18,881 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2026-03-04 13:26:16] 2026-03-04 12:25:18,897 | INFO     | sufficient remaining disk space (3314751111168 B)
[2026-03-04 13:26:16] 2026-03-04 12:25:18,897 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 13:26:16] 2026-03-04 12:25:18,898 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 13:26:16] 2026-03-04 12:25:18,898 | INFO     | update_server=False
[2026-03-04 13:26:16] 2026-03-04 12:25:18,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 13:26:16] 2026-03-04 12:25:18,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:26:16] 2026-03-04 12:25:18,899 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 13:26:16] 2026-03-04 12:25:18,899 | INFO     | aborting loop
[2026-03-04 13:26:16] 2026-03-04 12:25:19,077 | INFO     | all data control threads have been joined
[2026-03-04 13:26:16] 2026-03-04 12:25:19,203 | INFO     | all payload control threads have been joined
[2026-03-04 13:26:16] 2026-03-04 12:25:19,902 | INFO     | [job] job monitor thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:19,903 | INFO     | [job] retrieve thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:19,962 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:19,987 | INFO     | [data] copytool_in thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:19,995 | INFO     | all job control threads have been joined
[2026-03-04 13:26:16] 2026-03-04 12:25:20,083 | INFO     | [data] control thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:20,209 | INFO     | [payload] control thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:20,265 | INFO     | [payload] validate_post thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:20,488 | INFO     | [job] validate thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:20,871 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:20,904 | INFO     | [data] copytool_out thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:21,000 | INFO     | [job] control thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:21,021 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:21,068 | INFO     | [payload] failed_post thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:21,330 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:21,382 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 13:26:16] 2026-03-04 12:25:21,592 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 13:26:16] 2026-03-04 12:25:22,387 | INFO     | [job] queue monitor thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:25,598 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 13:26:16] 2026-03-04 12:25:48,737 | INFO     | PID=1081155 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 13:26:16] 2026-03-04 12:25:48,737 | INFO     | .. there are 18 such processes running
[2026-03-04 13:26:16] 2026-03-04 12:25:48,738 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 13:26:16] 2026-03-04 12:25:48,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 13:26:16] 2026-03-04 12:25:48,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 13:26:16] 2026-03-04 12:26:09,623 | INFO     | [monitor] cgroup control has ended
[2026-03-04 13:26:16] 2026-03-04 12:26:11,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23033580816192)>', '<ExcThread(monitor, started 23033340503808)>']
[2026-03-04 13:26:16] 2026-03-04 12:26:11,855 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 13:26:16] 2026-03-04 12:26:11,855 | INFO     | [monitor] control thread has ended
[2026-03-04 13:26:16] 2026-03-04 12:26:16,328 | INFO     | all workflow threads have been joined
[2026-03-04 13:26:16] 2026-03-04 12:26:16,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 13:26:16] 2026-03-04 12:26:16,328 | INFO     | traces error code: 0
[2026-03-04 13:26:16] 2026-03-04 12:26:16,328 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 13:26:16] 2026-03-04 12:26:16,460 [wrapper] ==== pilot stdout END ====
[2026-03-04 13:26:16] 2026-03-04 12:26:16,464 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 13:26:16] 2026-03-04 12:26:16,468 [wrapper] pilotpid: 1081155
[2026-03-04 13:26:16] 2026-03-04 12:26:16,472 [wrapper] Pilot exit status: 0
[2026-03-04 13:26:16] 2026-03-04 12:26:16,485 [wrapper] pandaids: 7036296367
[2026-03-04 13:26:16] 2026-03-04 12:26:16,623 [wrapper] cleanup supervisor_pilot 1538946 1081156
[2026-03-04 13:26:16] 2026-03-04 12:26:16,627 [wrapper] Test setup, not cleaning
[2026-03-04 13:26:16] 2026-03-04 12:26:16,630 [wrapper] apfmon messages muted
[2026-03-04 13:26:16] 2026-03-04 12:26:16,634 [wrapper] ==== wrapper stdout END ====
[2026-03-04 13:26:16] 2026-03-04 12:26:16,637 [wrapper] ==== wrapper stderr END ====
[2026-03-04 13:26:16]  *** Error codes and diagnostics ***
[2026-03-04 13:26:16]     "exeErrorCode": 0,
[2026-03-04 13:26:16]     "exeErrorDiag": "",
[2026-03-04 13:26:16]     "pilotErrorCode": 0,
[2026-03-04 13:26:16]     "pilotErrorDiag": "",
[2026-03-04 13:26:16]  *** Listing of results directory ***
[2026-03-04 13:26:16] total 465528
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc    584627 Mar  3 14:35 pilot3.tar.gz
[2026-03-04 13:26:16] -rwx------ 1 boinc boinc     36322 Mar  3 14:36 runpilot2-wrapper.sh
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc      5111 Mar  3 14:38 queuedata.json
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc       100 Mar  4 09:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 13:26:16] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 09:53 run_atlas
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc       105 Mar  4 09:53 job.xml
[2026-03-04 13:26:16] -rw-r--r-- 2 boinc boinc 256066982 Mar  4 09:53 EVNT.48455707._000003.pool.root.1
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc      6697 Mar  4 09:53 init_data.xml
[2026-03-04 13:26:16] -rw-r--r-- 2 boinc boinc     15845 Mar  4 09:53 start_atlas.sh
[2026-03-04 13:26:16] drwxrwx--x 2 boinc boinc      4096 Mar  4 09:53 shared
[2026-03-04 13:26:16] -rw-r--r-- 2 boinc boinc    597964 Mar  4 09:53 input.tar.gz
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc         0 Mar  4 09:53 boinc_lockfile
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc      2609 Mar  4 09:53 pandaJob.out
[2026-03-04 13:26:16] -rw------- 1 boinc boinc    997384 Mar  4 09:53 agis_schedconf.cvmfs.json
[2026-03-04 13:26:16] -rw------- 1 boinc boinc       442 Mar  4 09:53 workernode_map.json
[2026-03-04 13:26:16] drwx------ 5 boinc boinc      4096 Mar  4 09:53 pilot3
[2026-03-04 13:26:16] -rw------- 1 boinc boinc 212410328 Mar  4 13:24 HITS.48848507._000058.pool.root.1
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc       530 Mar  4 13:25 boinc_task_state.xml
[2026-03-04 13:26:16] -rw------- 1 boinc boinc      1029 Mar  4 13:25 memory_monitor_summary.json
[2026-03-04 13:26:16] -rw------- 1 boinc boinc   1516092 Mar  4 13:25 agis_ddmendpoints.agis.ALL.json
[2026-03-04 13:26:16] -rw------- 1 boinc boinc    377941 Mar  4 13:25 log.48848507._000058.job.log.tgz.1
[2026-03-04 13:26:16] -rw------- 1 boinc boinc      6343 Mar  4 13:25 heartbeat.json
[2026-03-04 13:26:16] -rw------- 1 boinc boinc        95 Mar  4 13:25 pilot_heartbeat.json
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc      8192 Mar  4 13:26 boinc_mmap_file
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc        28 Mar  4 13:26 wrapper_checkpoint.txt
[2026-03-04 13:26:16] -rw------- 1 boinc boinc      4831 Mar  4 13:26 pilotlog.txt
[2026-03-04 13:26:16] -rw------- 1 boinc boinc   1767234 Mar  4 13:26 log.48848507._000058.job.log.1
[2026-03-04 13:26:16] -rw------- 1 boinc boinc       357 Mar  4 13:26 output.list
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc       620 Mar  4 13:26 runtime_log
[2026-03-04 13:26:16] -rw------- 1 boinc boinc   2160640 Mar  4 13:26 result.tar.gz
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc      9205 Mar  4 13:26 runtime_log.err
[2026-03-04 13:26:16] -rw------- 1 boinc boinc       664 Mar  4 13:26 94WKDmI6eH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSeGLDm7G08Ro.diag
[2026-03-04 13:26:16] -rw-r--r-- 1 boinc boinc     21144 Mar  4 13:26 stderr.txt
[2026-03-04 13:26:16] HITS file was successfully produced:
[2026-03-04 13:26:16] -rw------- 1 boinc boinc 212410328 Mar  4 13:24 shared/HITS.pool.root.1
[2026-03-04 13:26:16]  *** Contents of shared directory: ***
[2026-03-04 13:26:16] total 460220
[2026-03-04 13:26:16] -rw-r--r-- 2 boinc boinc 256066982 Mar  4 09:53 ATLAS.root_0
[2026-03-04 13:26:16] -rw-r--r-- 2 boinc boinc     15845 Mar  4 09:53 start_atlas.sh
[2026-03-04 13:26:16] -rw-r--r-- 2 boinc boinc    597964 Mar  4 09:53 input.tar.gz
[2026-03-04 13:26:16] -rw------- 1 boinc boinc 212410328 Mar  4 13:24 HITS.pool.root.1
[2026-03-04 13:26:16] -rw------- 1 boinc boinc   2160640 Mar  4 13:26 result.tar.gz
13:26:17 (1076844): run_atlas exited; CPU time 49722.521884
13:26:17 (1076844): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN