Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:38:51 (1932030): wrapper (7.7.26015): starting
12:38:51 (1932030): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 12:38:51] Arguments: --nthreads 4
[2026-03-04 12:38:51] Threads: 4
[2026-03-04 12:38:51] Checking for CVMFS
[2026-03-04 12:38:51] No cvmfs_config command found, will try listing directly
[2026-03-04 12:38:51] CVMFS is ok
[2026-03-04 12:38:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 12:38:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 12:38:51] Further information can be found at the LHC@home message board.
[2026-03-04 12:38:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 12:38:51] Checking for apptainer binary...
[2026-03-04 12:38:51] which: no apptainer in ((null))
[2026-03-04 12:38:51] apptainer is not installed, using version from CVMFS
[2026-03-04 12:38:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 12:38:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-04 12:38:51] apptainer works
[2026-03-04 12:38:51] Set ATHENA_PROC_NUMBER=4
[2026-03-04 12:38:51] Set ATHENA_CORE_NUMBER=4
[2026-03-04 12:38:51] Starting ATLAS job with PandaID=7036368784
[2026-03-04 12:38:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 14:10:23]  *** The last 200 lines of the pilot log: ***
[2026-03-04 14:10:23]  direct_access_lan=False
[2026-03-04 14:10:23]  direct_access_wan=False
[2026-03-04 14:10:23]  domain=
[2026-03-04 14:10:23]  filesize=272628
[2026-03-04 14:10:23]  filetype=log
[2026-03-04 14:10:23]  guid=ae64abdb-533e-4ac2-b9e6-7371b96ae6a0
[2026-03-04 14:10:23]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-04 14:10:23]  is_altstaged=None
[2026-03-04 14:10:23]  is_tar=False
[2026-03-04 14:10:23]  lfn=log.48700938._002771.job.log.tgz.1
[2026-03-04 14:10:23]  mtime=0
[2026-03-04 14:10:23]  protocol_id=None
[2026-03-04 14:10:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 14:10:23]  replicas=None
[2026-03-04 14:10:23]  scope=mc23_13p6TeV
[2026-03-04 14:10:23]  status=None
[2026-03-04 14:10:23]  status_code=0
[2026-03-04 14:10:23]  storage_token=
[2026-03-04 14:10:23]  surl=/scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7036368784/log.48700938._002771.job.log.tgz.1
[2026-03-04 14:10:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/0b/log.48700938._002771.job.log.tgz.1
[2026-03-04 14:10:23]  workdir=None
[2026-03-04 14:10:23] ]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,012 | INFO     | transferring file log.48700938._002771.job.log.tgz.1 from /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7036368784/log.48700938._002771.job.log.tgz.1 to /scratch/b
[2026-03-04 14:10:23] 2026-03-04 13:09:41,012 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7036368784/log.48700938._002771.job.log.tgz.1 /scratch/boinc/var/slot80/slots/0/lo
[2026-03-04 14:10:23] 2026-03-04 13:09:41,038 | INFO     | adding to output.list: log.48700938._002771.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/66/0b/log.48700938._002771.job.log.tg
[2026-03-04 14:10:23] 2026-03-04 13:09:41,039 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 14:10:23] 2026-03-04 13:09:41,039 | INFO     | summary of transferred files:
[2026-03-04 14:10:23] 2026-03-04 13:09:41,039 | INFO     |  -- lfn=log.48700938._002771.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 14:10:23] 2026-03-04 13:09:41,040 | INFO     | stage-out finished correctly
[2026-03-04 14:10:23] 2026-03-04 13:09:41,322 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 14:10:23] 2026-03-04 13:09:41,825 | INFO     | job 7036368784 has state=finished
[2026-03-04 14:10:23] 2026-03-04 13:09:41,826 | INFO     | preparing for final server update for job 7036368784 in state='finished'
[2026-03-04 14:10:23] 2026-03-04 13:09:41,826 | INFO     | reading metadata from: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7036368784/jobReport.json
[2026-03-04 14:10:23] 2026-03-04 13:09:41,828 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot80/slots/0/workernode_map.json
[2026-03-04 14:10:23] 2026-03-04 13:09:41,829 | INFO     | this job has now completed (state=finished)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,829 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,829 | INFO     | log transfer has been attempted: DONE
[2026-03-04 14:10:23] 2026-03-04 13:09:41,829 | INFO     | job 7036368784 has finished - writing final server update
[2026-03-04 14:10:23] 2026-03-04 13:09:41,829 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2343428/.job.ad'
[2026-03-04 14:10:23] 2026-03-04 13:09:41,829 | INFO     | total number of processed events: 400 (read)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,852 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7036368784/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,853 | INFO     | extracted standard info from prmon json
[2026-03-04 14:10:23] 2026-03-04 13:09:41,853 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 14:10:23] 2026-03-04 13:09:41,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 14:10:23] 2026-03-04 13:09:41,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 14:10:23] 2026-03-04 13:09:41,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 14:10:23] 2026-03-04 13:09:41,855 | INFO     | fitting pss+swap vs Time
[2026-03-04 14:10:23] 2026-03-04 13:09:41,856 | INFO     | sum of square deviations: 170944600.5
[2026-03-04 14:10:23] 2026-03-04 13:09:41,856 | INFO     | sum of deviations: -571629718.9999999
[2026-03-04 14:10:23] 2026-03-04 13:09:41,856 | INFO     | mean x: 1772627148.5
[2026-03-04 14:10:23] 2026-03-04 13:09:41,856 | INFO     | mean y: 2362178.5853658537
[2026-03-04 14:10:23] 2026-03-04 13:09:41,856 | INFO     | intersect: 5929933776.781742
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | chi2: 0.0001476819748084384
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | current memory leak: -3.34 B/s (using 82 data points, chi2=0.00)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | could have reported an average CPU frequency of 2738 MHz (7 samples)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | ..............................
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | . Timing measurements:
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | . get job = 0 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | . initial setup = 6 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,857 | INFO     | . payload setup = 7 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,858 | INFO     | . stage-in = 0 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,858 | INFO     | . payload execution = 5408 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,858 | INFO     | . stage-out = 0 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,858 | INFO     | . log creation = 0 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,858 | INFO     | ..............................
[2026-03-04 14:10:23] 2026-03-04 13:09:41,944 | INFO     | 
[2026-03-04 14:10:23] 2026-03-04 13:09:41,944 | INFO     | job summary report
[2026-03-04 14:10:23] 2026-03-04 13:09:41,944 | INFO     | --------------------------------------------------
[2026-03-04 14:10:23] 2026-03-04 13:09:41,944 | INFO     | PanDA job id: 7036368784
[2026-03-04 14:10:23] 2026-03-04 13:09:41,944 | INFO     | task id: 48700938
[2026-03-04 14:10:23] 2026-03-04 13:09:41,944 | INFO     | errors: (none)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | pilot state: finished 
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | transexitcode: 0
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | exeerrorcode: 0
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | exeerrordiag: 
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | exitcode: 0
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | exitmsg: OK
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | cpuconsumptiontime: 20505 s
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | nevents: 400
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | neventsw: 0
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | pid: 1941496
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | pgrp: 1941496
[2026-03-04 14:10:23] 2026-03-04 13:09:41,945 | INFO     | corecount: 4
[2026-03-04 14:10:23] 2026-03-04 13:09:41,946 | INFO     | event service: False
[2026-03-04 14:10:23] 2026-03-04 13:09:41,946 | INFO     | sizes: {0: 2286571, 1: 2287032, 11: 2287032, 5420: 2313691, 5422: 2322767, 5423: 2322905}
[2026-03-04 14:10:23] 2026-03-04 13:09:41,946 | INFO     | --------------------------------------------------
[2026-03-04 14:10:23] 2026-03-04 13:09:41,946 | INFO     | 
[2026-03-04 14:10:23] 2026-03-04 13:09:41,946 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2026-03-04 14:10:23] 2026-03-04 13:09:41,976 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,976 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,976 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,976 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,977 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,978 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,978 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 14:10:23] 2026-03-04 13:09:41,978 | INFO     | job 7036368784 has completed (purged errors)
[2026-03-04 14:10:23] 2026-03-04 13:09:41,978 | INFO     | overall cleanup function is called
[2026-03-04 14:10:23] 2026-03-04 13:09:42,987 | INFO     | --- collectZombieJob: --- 10, [1941496]
[2026-03-04 14:10:23] 2026-03-04 13:09:42,987 | INFO     | zombie collector waiting for pid 1941496
[2026-03-04 14:10:23] 2026-03-04 13:09:42,987 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 14:10:23] 2026-03-04 13:09:42,987 | INFO     | collected zombie processes
[2026-03-04 14:10:23] 2026-03-04 13:09:42,988 | INFO     | will attempt to kill all subprocesses of pid=1941496
[2026-03-04 14:10:23] 2026-03-04 13:09:43,521 | INFO     | process IDs to be killed: [1941496] (in reverse order)
[2026-03-04 14:10:23] 2026-03-04 13:09:43,729 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 14:10:23] 2026-03-04 13:09:43,730 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 14:10:23] 2026-03-04 13:09:43,748 | INFO     | did not find any defunct processes belonging to 1941496
[2026-03-04 14:10:23] 2026-03-04 13:09:43,764 | INFO     | did not find any defunct processes belonging to 1941496
[2026-03-04 14:10:23] 2026-03-04 13:09:43,764 | INFO     | ready for new job
[2026-03-04 14:10:23] 2026-03-04 13:09:43,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 14:10:23] 2026-03-04 13:09:43,766 | INFO     | **************************************
[2026-03-04 14:10:23] 2026-03-04 13:09:43,767 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 14:10:23] 2026-03-04 13:09:43,767 | INFO     | **************************************
[2026-03-04 14:10:23] 2026-03-04 13:09:43,767 | INFO     | 
[2026-03-04 14:10:23] 2026-03-04 13:09:43,775 | INFO     | architecture information:
[2026-03-04 14:10:23] 2026-03-04 13:09:43,775 | INFO     | executing command: cat /etc/os-release
[2026-03-04 14:10:23] 2026-03-04 13:09:43,796 | INFO     | cat /etc/os-release:
[2026-03-04 14:10:23] NAME="CentOS Linux"
[2026-03-04 14:10:23] VERSION="7 (Core)"
[2026-03-04 14:10:23] ID="centos"
[2026-03-04 14:10:23] ID_LIKE="rhel fedora"
[2026-03-04 14:10:23] VERSION_ID="7"
[2026-03-04 14:10:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 14:10:23] ANSI_COLOR="0;31"
[2026-03-04 14:10:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 14:10:23] HOME_URL="https://www.centos.org/"
[2026-03-04 14:10:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 14:10:23] 
[2026-03-04 14:10:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 14:10:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 14:10:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 14:10:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 14:10:23] 
[2026-03-04 14:10:23] 2026-03-04 13:09:43,797 | INFO     | **************************************
[2026-03-04 14:10:23] 2026-03-04 13:09:44,300 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2026-03-04 14:10:23] 2026-03-04 13:09:44,321 | INFO     | sufficient remaining disk space (3313787469824 B)
[2026-03-04 14:10:23] 2026-03-04 13:09:44,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 14:10:23] 2026-03-04 13:09:44,322 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 14:10:23] 2026-03-04 13:09:44,322 | INFO     | update_server=False
[2026-03-04 14:10:23] 2026-03-04 13:09:44,322 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 14:10:23] 2026-03-04 13:09:44,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 14:10:23] 2026-03-04 13:09:44,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 14:10:23] 2026-03-04 13:09:44,323 | INFO     | aborting loop
[2026-03-04 14:10:23] 2026-03-04 13:09:44,765 | INFO     | all data control threads have been joined
[2026-03-04 14:10:23] 2026-03-04 13:09:44,951 | INFO     | all payload control threads have been joined
[2026-03-04 14:10:23] 2026-03-04 13:09:45,327 | INFO     | [job] retrieve thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:45,328 | INFO     | [job] job monitor thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:45,750 | INFO     | all job control threads have been joined
[2026-03-04 14:10:23] 2026-03-04 13:09:45,771 | INFO     | [data] control thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:45,957 | INFO     | [payload] control thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,049 | INFO     | [job] validate thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,066 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,135 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,224 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,327 | INFO     | [data] copytool_out thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,416 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,552 | INFO     | [payload] validate_post thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,756 | INFO     | [job] control thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,780 | INFO     | [data] copytool_in thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,827 | INFO     | [payload] failed_post thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:46,955 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 14:10:23] 2026-03-04 13:09:47,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 14:10:23] 2026-03-04 13:09:47,960 | INFO     | [job] queue monitor thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:09:51,422 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 14:10:23] 2026-03-04 13:10:14,393 | INFO     | PID=1936435 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 14:10:23] 2026-03-04 13:10:14,394 | INFO     | .. there are 19 such processes running
[2026-03-04 14:10:23] 2026-03-04 13:10:14,395 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 14:10:23] 2026-03-04 13:10:14,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 14:10:23] 2026-03-04 13:10:14,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 14:10:23] 2026-03-04 13:10:16,005 | INFO     | [monitor] cgroup control has ended
[2026-03-04 14:10:23] 2026-03-04 13:10:17,802 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22375917590336)>', '<ExcThread(monitor, started 22375675729664)>']
[2026-03-04 14:10:23] 2026-03-04 13:10:18,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 14:10:23] 2026-03-04 13:10:18,411 | INFO     | [monitor] control thread has ended
[2026-03-04 14:10:23] 2026-03-04 13:10:22,807 | INFO     | all workflow threads have been joined
[2026-03-04 14:10:23] 2026-03-04 13:10:22,808 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 14:10:23] 2026-03-04 13:10:22,808 | INFO     | traces error code: 0
[2026-03-04 14:10:23] 2026-03-04 13:10:22,808 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 14:10:23] 2026-03-04 13:10:22,913 [wrapper] ==== pilot stdout END ====
[2026-03-04 14:10:23] 2026-03-04 13:10:22,916 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 14:10:23] 2026-03-04 13:10:22,920 [wrapper] pilotpid: 1936435
[2026-03-04 14:10:23] 2026-03-04 13:10:22,923 [wrapper] Pilot exit status: 0
[2026-03-04 14:10:23] 2026-03-04 13:10:22,938 [wrapper] pandaids: 7036368784
[2026-03-04 14:10:23] 2026-03-04 13:10:23,070 [wrapper] cleanup supervisor_pilot 2129931 1936436
[2026-03-04 14:10:23] 2026-03-04 13:10:23,074 [wrapper] Test setup, not cleaning
[2026-03-04 14:10:23] 2026-03-04 13:10:23,078 [wrapper] apfmon messages muted
[2026-03-04 14:10:23] 2026-03-04 13:10:23,081 [wrapper] ==== wrapper stdout END ====
[2026-03-04 14:10:23] 2026-03-04 13:10:23,084 [wrapper] ==== wrapper stderr END ====
[2026-03-04 14:10:23]  *** Error codes and diagnostics ***
[2026-03-04 14:10:23]     "exeErrorCode": 0,
[2026-03-04 14:10:23]     "exeErrorDiag": "",
[2026-03-04 14:10:23]     "pilotErrorCode": 0,
[2026-03-04 14:10:23]     "pilotErrorDiag": "",
[2026-03-04 14:10:23]  *** Listing of results directory ***
[2026-03-04 14:10:23] total 329104
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc    584627 Mar  3 17:29 pilot3.tar.gz
[2026-03-04 14:10:23] -rwx------ 1 boinc boinc     36322 Mar  3 17:33 runpilot2-wrapper.sh
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc      5111 Mar  3 17:33 queuedata.json
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc       100 Mar  4 12:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 14:10:23] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 12:38 run_atlas
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc       105 Mar  4 12:38 job.xml
[2026-03-04 14:10:23] -rw-r--r-- 2 boinc boinc 189219272 Mar  4 12:38 EVNT.48700936._000109.pool.root.1
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc      6698 Mar  4 12:38 init_data.xml
[2026-03-04 14:10:23] -rw-r--r-- 2 boinc boinc     15845 Mar  4 12:38 start_atlas.sh
[2026-03-04 14:10:23] drwxrwx--x 2 boinc boinc      4096 Mar  4 12:38 shared
[2026-03-04 14:10:23] -rw-r--r-- 2 boinc boinc    597931 Mar  4 12:38 input.tar.gz
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc         0 Mar  4 12:38 boinc_lockfile
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc      2500 Mar  4 12:38 pandaJob.out
[2026-03-04 14:10:23] -rw------- 1 boinc boinc    997352 Mar  4 12:39 agis_schedconf.cvmfs.json
[2026-03-04 14:10:23] -rw------- 1 boinc boinc   1516092 Mar  4 12:39 agis_ddmendpoints.agis.ALL.json
[2026-03-04 14:10:23] -rw------- 1 boinc boinc       443 Mar  4 12:39 workernode_map.json
[2026-03-04 14:10:23] drwx------ 5 boinc boinc      4096 Mar  4 12:39 pilot3
[2026-03-04 14:10:23] -rw------- 1 boinc boinc 141737146 Mar  4 14:09 HITS.48700938._002771.pool.root.1
[2026-03-04 14:10:23] -rw------- 1 boinc boinc      1024 Mar  4 14:09 memory_monitor_summary.json
[2026-03-04 14:10:23] -rw------- 1 boinc boinc    272628 Mar  4 14:09 log.48700938._002771.job.log.tgz.1
[2026-03-04 14:10:23] -rw------- 1 boinc boinc      6341 Mar  4 14:09 heartbeat.json
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc       530 Mar  4 14:09 boinc_task_state.xml
[2026-03-04 14:10:23] -rw------- 1 boinc boinc        95 Mar  4 14:10 pilot_heartbeat.json
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc      8192 Mar  4 14:10 boinc_mmap_file
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc        27 Mar  4 14:10 wrapper_checkpoint.txt
[2026-03-04 14:10:23] -rw------- 1 boinc boinc      4831 Mar  4 14:10 pilotlog.txt
[2026-03-04 14:10:23] -rw------- 1 boinc boinc    782193 Mar  4 14:10 log.48700938._002771.job.log.1
[2026-03-04 14:10:23] -rw------- 1 boinc boinc       357 Mar  4 14:10 output.list
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc       620 Mar  4 14:10 runtime_log
[2026-03-04 14:10:23] -rw------- 1 boinc boinc   1075200 Mar  4 14:10 result.tar.gz
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc      9204 Mar  4 14:10 runtime_log.err
[2026-03-04 14:10:23] -rw------- 1 boinc boinc       660 Mar  4 14:10 2zmKDmmrhH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmr2ELDmtWqmln.diag
[2026-03-04 14:10:23] -rw-r--r-- 1 boinc boinc     20840 Mar  4 14:10 stderr.txt
[2026-03-04 14:10:23] HITS file was successfully produced:
[2026-03-04 14:10:23] -rw------- 1 boinc boinc 141737146 Mar  4 14:09 shared/HITS.pool.root.1
[2026-03-04 14:10:23]  *** Contents of shared directory: ***
[2026-03-04 14:10:23] total 324864
[2026-03-04 14:10:23] -rw-r--r-- 2 boinc boinc 189219272 Mar  4 12:38 ATLAS.root_0
[2026-03-04 14:10:23] -rw-r--r-- 2 boinc boinc     15845 Mar  4 12:38 start_atlas.sh
[2026-03-04 14:10:23] -rw-r--r-- 2 boinc boinc    597931 Mar  4 12:38 input.tar.gz
[2026-03-04 14:10:23] -rw------- 1 boinc boinc 141737146 Mar  4 14:09 HITS.pool.root.1
[2026-03-04 14:10:23] -rw------- 1 boinc boinc   1075200 Mar  4 14:10 result.tar.gz
14:10:24 (1932030): run_atlas exited; CPU time 20745.739872
14:10:24 (1932030): called boinc_finish(0)

</stderr_txt>
]]>

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