Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:34:58 (2097656): wrapper (7.7.26015): starting
12:34:58 (2097656): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 12:34:58] Arguments: --nthreads 12
[2026-03-03 12:34:58] Threads: 12
[2026-03-03 12:34:58] Checking for CVMFS
[2026-03-03 12:34:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 12:34:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 12:34:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 12:35:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 12:35:00] 2.11.5.0 1139287 133371 366028 156856 0 194 42204092 45568001 20808 130560 0 830380231 99.816 474947922 18200 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-03 12:35:00] CVMFS is ok
[2026-03-03 12:35:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 12:35:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 12:35:00] Further information can be found at the LHC@home message board.
[2026-03-03 12:35:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 12:35:00] Checking for apptainer binary...
[2026-03-03 12:35:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 12:35:00] Running /usr/bin/apptainer --version
[2026-03-03 12:35:00] apptainer version 1.4.1-1.el9
[2026-03-03 12:35:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 12:35:01] wns0042.triumf.lcg
[2026-03-03 12:35:01] apptainer works
[2026-03-03 12:35:01] Set ATHENA_PROC_NUMBER=12
[2026-03-03 12:35:01] Set ATHENA_CORE_NUMBER=12
[2026-03-03 12:35:02] Starting ATLAS job with PandaID=7036368106
[2026-03-03 12:35:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 12:41:42]  *** The last 200 lines of the pilot log: ***
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | could have reported an average CPU frequency of 1386 MHz (4 samples)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | ..............................
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | . Timing measurements:
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . get job = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . initial setup = 41 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . payload setup = 42 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . stage-in = 1 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . payload execution = 82 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . stage-out = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . log creation = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | ..............................
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 12:41:42] 2026-03-03 20:40:59,834 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036368106/pilotlog.txt
[2026-03-03 12:41:42] 2026-03-03 20:40:59,970 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-03 12:41:42] - Log from pilotlog.txt -
[2026-03-03 12:41:42] 2026-03-03 20:40:59,815 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036368106/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,816 | INFO     | extracted standard info from prmon json
[2026-03-03 12:41:42] 2026-03-03 20:40:59,816 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 12:41:42] 2026-03-03 20:40:59,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 12:41:42] 2026-03-03 20:40:59,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 12:41:42] 2026-03-03 20:40:59,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 12:41:42] 2026-03-03 20:40:59,818 | WARNING  | wrong length of table data, x=[1772570293.0], y=[1179.0] (must be same and length>=4)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | could have reported an average CPU frequency of 1386 MHz (4 samples)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | ..............................
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | . Timing measurements:
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . get job = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . initial setup = 41 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . payload setup = 42 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . stage-in = 1 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . payload execution = 82 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . stage-out = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . log creation = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | ..............................
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 12:41:42] 2026-03-03 20:40:59,834 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036368106/pilotlog.txt
[2026-03-03 12:41:42] 2026-03-03 20:40:59,971 | WARNING  | 
[2026-03-03 12:41:42] [begin log extracts]
[2026-03-03 12:41:42] - Log from pilotlog.txt -
[2026-03-03 12:41:42] 2026-03-03 20:40:59,815 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7036368106/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,816 | INFO     | extracted standard info from prmon json
[2026-03-03 12:41:42] 2026-03-03 20:40:59,816 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 12:41:42] 2026-03-03 20:40:59,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 12:41:42] 2026-03-03 20:40:59,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 12:41:42] 2026-03-03 20:40:59,817 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 12:41:42] 2026-03-03 20:40:59,818 | WARNING  | wrong length of table data, x=[1772570293.0], y=[1179.0] (must be same and length>=4)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | could have reported an average CPU frequency of 1386 MHz (4 samples)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | ..............................
[2026-03-03 12:41:42] 2026-03-03 20:40:59,832 | INFO     | . Timing measurements:
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . get job = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . initial setup = 41 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . payload setup = 42 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . stage-in = 1 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . payload execution = 82 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . stage-out = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | . log creation = 0 s
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | ..............................
[2026-03-03 12:41:42] 2026-03-03 20:40:59,833 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 12:41:42] 2026-03-03 20:40:59,834 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7036368106/pilotlog.txt
[2026-03-03 12:41:42] [end log extracts]
[2026-03-03 12:41:42] 2026-03-03 20:40:59,971 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-03 12:41:42] 2026-03-03 20:40:59,972 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-03 12:41:42] 2026-03-03 20:41:00,050 | INFO     | time since job start (265s) is within the limit (349056.0s)
[2026-03-03 12:41:42] 2026-03-03 20:41:00,544 | INFO     | 
[2026-03-03 12:41:42] 2026-03-03 20:41:00,544 | INFO     | job summary report
[2026-03-03 12:41:42] 2026-03-03 20:41:00,544 | INFO     | --------------------------------------------------
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | PanDA job id: 7036368106
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | task id: 48700858
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-03 12:38:46,883 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | pilot state: failed 
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | transexitcode: 65
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | exeerrorcode: 65
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | exitcode: 65
[2026-03-03 12:41:42] 2026-03-03 20:41:00,545 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | cpuconsumptiontime: 25 s
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | nevents: 0
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | neventsw: 0
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | pid: 2106257
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | pgrp: 2106257
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | corecount: 12
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | event service: False
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | sizes: {0: 2286474, 1: 2286530, 2: 2286558, 4: 2267545, 5: 2287075, 6: 2287103, 16: 2287259, 128: 2310566, 129: 2314918, 131: 2314918, 248: 2315112}
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | --------------------------------------------------
[2026-03-03 12:41:42] 2026-03-03 20:41:00,546 | INFO     | 
[2026-03-03 12:41:42] 2026-03-03 20:41:00,547 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-03 12:41:42] 2026-03-03 20:41:00,778 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,778 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,780 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 12:41:42] 2026-03-03 20:41:00,781 | INFO     | job 7036368106 has completed (purged errors)
[2026-03-03 12:41:42] 2026-03-03 20:41:00,819 | INFO     | overall cleanup function is called
[2026-03-03 12:41:42] 2026-03-03 20:41:01,834 | INFO     | --- collectZombieJob: --- 10, [2106257]
[2026-03-03 12:41:42] 2026-03-03 20:41:01,834 | INFO     | zombie collector waiting for pid 2106257
[2026-03-03 12:41:42] 2026-03-03 20:41:01,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 12:41:42] 2026-03-03 20:41:01,835 | INFO     | collected zombie processes
[2026-03-03 12:41:42] 2026-03-03 20:41:01,835 | INFO     | will attempt to kill all subprocesses of pid=2106257
[2026-03-03 12:41:42] 2026-03-03 20:41:02,699 | INFO     | PID=2101461 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 12:41:42] 2026-03-03 20:41:02,699 | INFO     | .. there are 28 such processes running
[2026-03-03 12:41:42] 2026-03-03 20:41:03,734 | INFO     | process IDs to be killed: [2106257] (in reverse order)
[2026-03-03 12:41:42] 2026-03-03 20:41:04,184 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 12:41:42] 2026-03-03 20:41:04,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 12:41:42] 2026-03-03 20:41:04,250 | INFO     | did not find any defunct processes belonging to 2106257
[2026-03-03 12:41:42] 2026-03-03 20:41:04,312 | INFO     | did not find any defunct processes belonging to 2106257
[2026-03-03 12:41:42] 2026-03-03 20:41:04,312 | INFO     | ready for new job
[2026-03-03 12:41:42] 2026-03-03 20:41:04,313 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 12:41:42] 2026-03-03 20:41:04,315 | INFO     | **************************************
[2026-03-03 12:41:42] 2026-03-03 20:41:04,315 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 12:41:42] 2026-03-03 20:41:04,315 | INFO     | **************************************
[2026-03-03 12:41:42] 2026-03-03 20:41:04,315 | INFO     | 
[2026-03-03 12:41:42] 2026-03-03 20:41:04,323 | INFO     | architecture information:
[2026-03-03 12:41:42] 2026-03-03 20:41:04,339 | INFO     | executing command: cat /etc/os-release
[2026-03-03 12:41:42] 2026-03-03 20:41:04,479 | INFO     | cat /etc/os-release:
[2026-03-03 12:41:42] NAME="CentOS Linux"
[2026-03-03 12:41:42] VERSION="7 (Core)"
[2026-03-03 12:41:42] ID="centos"
[2026-03-03 12:41:42] ID_LIKE="rhel fedora"
[2026-03-03 12:41:42] VERSION_ID="7"
[2026-03-03 12:41:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 12:41:42] ANSI_COLOR="0;31"
[2026-03-03 12:41:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 12:41:42] HOME_URL="https://www.centos.org/"
[2026-03-03 12:41:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 12:41:42] 
[2026-03-03 12:41:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 12:41:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 12:41:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 12:41:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 12:41:42] 
[2026-03-03 12:41:42] 2026-03-03 20:41:04,480 | INFO     | **************************************
[2026-03-03 12:41:42] 2026-03-03 20:41:04,983 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-03 12:41:42] 2026-03-03 20:41:05,016 | INFO     | sufficient remaining disk space (1999671132160 B)
[2026-03-03 12:41:42] 2026-03-03 20:41:05,017 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 12:41:42] 2026-03-03 20:41:05,017 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 12:41:42] 2026-03-03 20:41:05,017 | INFO     | update_server=False
[2026-03-03 12:41:42] 2026-03-03 20:41:05,017 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 12:41:42] 2026-03-03 20:41:05,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 12:41:42] 2026-03-03 20:41:05,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:41:42] 2026-03-03 20:41:05,177 | INFO     | aborting loop
[2026-03-03 12:41:42] 2026-03-03 20:41:05,510 | INFO     | all data control threads have been joined
[2026-03-03 12:41:42] 2026-03-03 20:41:05,518 | INFO     | all job control threads have been joined
[2026-03-03 12:41:42] 2026-03-03 20:41:05,594 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 12:41:42] 2026-03-03 20:41:05,787 | INFO     | all payload control threads have been joined
[2026-03-03 12:41:42] 2026-03-03 20:41:05,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 12:41:42] 2026-03-03 20:41:06,023 | INFO     | [job] retrieve thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,035 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,184 | INFO     | [job] job monitor thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,193 | INFO     | [payload] validate_post thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,254 | INFO     | [data] copytool_in thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,255 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,255 | INFO     | [job] validate thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,516 | INFO     | [data] control thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,524 | INFO     | [job] control thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,600 | INFO     | [job] queue monitor thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,756 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:06,793 | INFO     | [payload] control thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:07,024 | INFO     | [data] copytool_out thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:07,273 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:07,301 | INFO     | [payload] failed_post thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:09,932 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 12:41:42] 2026-03-03 20:41:33,729 | INFO     | 309s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-03-03 12:41:42] 2026-03-03 20:41:34,824 | INFO     | [monitor] cgroup control has ended
[2026-03-03 12:41:42] 2026-03-03 20:41:35,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139988254639936)>', '<ExcThread(monitor, started 139987706160896)>']
[2026-03-03 12:41:42] 2026-03-03 20:41:35,480 | INFO     | PID=2101461 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 12:41:42] 2026-03-03 20:41:35,480 | INFO     | .. there are 28 such processes running
[2026-03-03 12:41:42] 2026-03-03 20:41:35,480 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 12:41:42] 2026-03-03 20:41:35,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 12:41:42] 2026-03-03 20:41:35,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 12:41:42] 2026-03-03 20:41:35,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 12:41:42] 2026-03-03 20:41:35,481 | INFO     | [monitor] control thread has ended
[2026-03-03 12:41:42] 2026-03-03 20:41:40,030 | INFO     | all workflow threads have been joined
[2026-03-03 12:41:42] 2026-03-03 20:41:40,030 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 12:41:42] 2026-03-03 20:41:40,031 | INFO     | traces error code: 0
[2026-03-03 12:41:42] 2026-03-03 20:41:40,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 12:41:42] 2026-03-03 20:41:40,405 [wrapper] ==== pilot stdout END ====
[2026-03-03 12:41:42] 2026-03-03 20:41:40,425 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 12:41:42] 2026-03-03 20:41:40,490 [wrapper] pilotpid: 2101461
[2026-03-03 12:41:42] 2026-03-03 20:41:40,547 [wrapper] Pilot exit status: 0
[2026-03-03 12:41:42] 2026-03-03 20:41:40,694 [wrapper] pandaids: 7036368106
[2026-03-03 12:41:42] 2026-03-03 20:41:41,293 [wrapper] cleanup supervisor_pilot 2101467 2101462
[2026-03-03 12:41:42] 2026-03-03 20:41:41,324 [wrapper] Test setup, not cleaning
[2026-03-03 12:41:42] 2026-03-03 20:41:41,359 [wrapper] apfmon messages muted
[2026-03-03 12:41:42] 2026-03-03 20:41:41,378 [wrapper] ==== wrapper stdout END ====
[2026-03-03 12:41:42] 2026-03-03 20:41:41,395 [wrapper] ==== wrapper stderr END ====
[2026-03-03 12:41:42]  *** Error codes and diagnostics ***
[2026-03-03 12:41:42]     "exeErrorCode": 65,
[2026-03-03 12:41:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 12:41:42]     "pilotErrorCode": 1305,
[2026-03-03 12:41:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 12:41:42]  *** Listing of results directory ***
[2026-03-03 12:41:42] total 190564
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc    584627 Mar  3 08:29 pilot3.tar.gz
[2026-03-03 12:41:42] -rwx------. 1 boinc boinc     36322 Mar  3 08:33 runpilot2-wrapper.sh
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc      5111 Mar  3 08:33 queuedata.json
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc       100 Mar  3 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 12:41:42] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 12:34 run_atlas
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc       105 Mar  3 12:34 job.xml
[2026-03-03 12:41:42] -rw-r--r--. 2 boinc boinc 190979810 Mar  3 12:34 EVNT.48700856._000106.pool.root.1
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc      6594 Mar  3 12:34 init_data.xml
[2026-03-03 12:41:42] -rw-r--r--. 2 boinc boinc     15845 Mar  3 12:34 start_atlas.sh
[2026-03-03 12:41:42] drwxrwx--x. 2 boinc boinc      4096 Mar  3 12:34 shared
[2026-03-03 12:41:42] -rw-r--r--. 2 boinc boinc    597942 Mar  3 12:34 input.tar.gz
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc         0 Mar  3 12:34 boinc_lockfile
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc      2521 Mar  3 12:35 pandaJob.out
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc    998476 Mar  3 12:35 agis_schedconf.cvmfs.json
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc   1516092 Mar  3 12:35 agis_ddmendpoints.agis.ALL.json
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc       444 Mar  3 12:36 workernode_map.json
[2026-03-03 12:41:42] drwx------. 5 boinc boinc      4096 Mar  3 12:36 pilot3
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc       976 Mar  3 12:38 memory_monitor_summary.json
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc     22399 Mar  3 12:39 log.48700858._002677.job.log.tgz.1
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc      7048 Mar  3 12:40 heartbeat.json
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc        95 Mar  3 12:41 pilot_heartbeat.json
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc        23 Mar  3 12:41 wrapper_checkpoint.txt
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc      8192 Mar  3 12:41 boinc_mmap_file
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc      4933 Mar  3 12:41 pilotlog.txt
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc       524 Mar  3 12:41 boinc_task_state.xml
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc     91343 Mar  3 12:41 log.48700858._002677.job.log.1
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc       188 Mar  3 12:41 output.list
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc       620 Mar  3 12:41 runtime_log
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc    133120 Mar  3 12:41 result.tar.gz
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc       643 Mar  3 12:41 US6KDmdrhH9n9Rq4apOajLDm4fhM0noT9bVooX4SDma1ELDmqLgRNo.diag
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc      8635 Mar  3 12:41 runtime_log.err
[2026-03-03 12:41:42] -rw-r--r--. 1 boinc boinc     21961 Mar  3 12:41 stderr.txt
[2026-03-03 12:41:42] No HITS result produced
[2026-03-03 12:41:42]  *** Contents of shared directory: ***
[2026-03-03 12:41:42] total 187240
[2026-03-03 12:41:42] -rw-r--r--. 2 boinc boinc 190979810 Mar  3 12:34 ATLAS.root_0
[2026-03-03 12:41:42] -rw-r--r--. 2 boinc boinc     15845 Mar  3 12:34 start_atlas.sh
[2026-03-03 12:41:42] -rw-r--r--. 2 boinc boinc    597942 Mar  3 12:34 input.tar.gz
[2026-03-03 12:41:42] -rw-------. 1 boinc boinc    133120 Mar  3 12:41 result.tar.gz
12:41:44 (2097656): run_atlas exited; CPU time 36.525125
12:41:44 (2097656): called boinc_finish(0)

</stderr_txt>
]]>

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