Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:12:29 (1653537): wrapper (7.7.26015): starting
02:12:29 (1653537): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 02:12:29] Arguments: --nthreads 4
[2026-03-04 02:12:29] Threads: 4
[2026-03-04 02:12:29] Checking for CVMFS
[2026-03-04 02:12:29] No cvmfs_config command found, will try listing directly
[2026-03-04 02:12:29] CVMFS is ok
[2026-03-04 02:12:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 02:12:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 02:12:29] Further information can be found at the LHC@home message board.
[2026-03-04 02:12:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 02:12:29] Checking for apptainer binary...
[2026-03-04 02:12:29] which: no apptainer in ((null))
[2026-03-04 02:12:29] apptainer is not installed, using version from CVMFS
[2026-03-04 02:12:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 02:12:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-04 02:12:30] apptainer works
[2026-03-04 02:12:30] Set ATHENA_PROC_NUMBER=4
[2026-03-04 02:12:30] Set ATHENA_CORE_NUMBER=4
[2026-03-04 02:12:30] Starting ATLAS job with PandaID=7036288394
[2026-03-04 02:12:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 04:00:02]  *** The last 200 lines of the pilot log: ***
[2026-03-04 04:00:02]  status=None
[2026-03-04 04:00:02]  status_code=0
[2026-03-04 04:00:02]  storage_token=
[2026-03-04 04:00:02]  surl=/var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036288394/log.48838577._003363.job.log.tgz.1
[2026-03-04 04:00:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/f2/log.48838577._003363.job.log.tgz.1
[2026-03-04 04:00:02]  workdir=None
[2026-03-04 04:00:02] ]
[2026-03-04 04:00:02] 2026-03-04 02:51:47,954 | INFO     | transferring file log.48838577._003363.job.log.tgz.1 from /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036288394/log.48838577._003363.job.log.tgz.1 to /var/lib/
[2026-03-04 04:00:02] 2026-03-04 02:51:47,954 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036288394/log.48838577._003363.job.log.tgz.1 /var/lib/boinc/var/slot236/slots/0/
[2026-03-04 04:00:02] 2026-03-04 02:51:47,969 | INFO     | adding to output.list: log.48838577._003363.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/45/f2/log.48838577._003363.job.log.tg
[2026-03-04 04:00:02] 2026-03-04 02:51:47,970 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 04:00:02] 2026-03-04 02:51:47,970 | INFO     | summary of transferred files:
[2026-03-04 04:00:02] 2026-03-04 02:51:47,970 | INFO     |  -- lfn=log.48838577._003363.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 04:00:02] 2026-03-04 02:51:47,970 | INFO     | stage-out finished correctly
[2026-03-04 04:00:02] 2026-03-04 02:51:48,072 | INFO     | time since job start (5946s) is within the limit (349056.0s)
[2026-03-04 04:00:02] 2026-03-04 02:51:48,801 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 04:00:02] 2026-03-04 02:51:49,410 | INFO     | job 7036288394 has state=finished
[2026-03-04 04:00:02] 2026-03-04 02:51:49,410 | INFO     | preparing for final server update for job 7036288394 in state='finished'
[2026-03-04 04:00:02] 2026-03-04 02:51:49,411 | INFO     | reading metadata from: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036288394/jobReport.json
[2026-03-04 04:00:02] 2026-03-04 02:51:49,412 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot236/slots/0/workernode_map.json
[2026-03-04 04:00:02] 2026-03-04 02:51:49,412 | INFO     | this job has now completed (state=finished)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,412 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,412 | INFO     | log transfer has been attempted: DONE
[2026-03-04 04:00:02] 2026-03-04 02:51:49,412 | INFO     | job 7036288394 has finished - writing final server update
[2026-03-04 04:00:02] 2026-03-04 02:51:49,413 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19507/.job.ad'
[2026-03-04 04:00:02] 2026-03-04 02:51:49,413 | INFO     | total number of processed events: 400 (read)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,431 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036288394/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,431 | INFO     | extracted standard info from prmon json
[2026-03-04 04:00:02] 2026-03-04 02:51:49,431 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:00:02] 2026-03-04 02:51:49,432 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:00:02] 2026-03-04 02:51:49,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:00:02] 2026-03-04 02:51:49,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:00:02] 2026-03-04 02:51:49,433 | INFO     | fitting pss+swap vs Time
[2026-03-04 04:00:02] 2026-03-04 02:51:49,433 | INFO     | sum of square deviations: 233641590.0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,433 | INFO     | sum of deviations: 1417438700.0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,433 | INFO     | mean x: 1772589833.0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | mean y: 2349342.846153846
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | intersect: -10751461348.652468
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | chi2: 0.0005503759949767183
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | current memory leak: 6.07 B/s (using 91 data points, chi2=0.00)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | could have reported an average CPU frequency of 3583 MHz (7 samples)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | ..............................
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . Timing measurements:
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . get job = 0 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . initial setup = 4 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . payload setup = 5 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . stage-in = 0 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . payload execution = 5924 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . stage-out = 0 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | . log creation = 0 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,434 | INFO     | ..............................
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | 
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | job summary report
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | --------------------------------------------------
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | PanDA job id: 7036288394
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | task id: 48838577
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | errors: (none)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | pilot state: finished 
[2026-03-04 04:00:02] 2026-03-04 02:51:49,483 | INFO     | transexitcode: 0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | exeerrorcode: 0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | exeerrordiag: 
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | exitcode: 0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | exitmsg: OK
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | cpuconsumptiontime: 22855 s
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | nevents: 400
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | neventsw: 0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | pid: 1664054
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | pgrp: 1664054
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | corecount: 4
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | event service: False
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | sizes: {0: 2286657, 1: 2287118, 11: 2287118, 5933: 2313822, 5935: 2322844, 5936: 2323222}
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | --------------------------------------------------
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | 
[2026-03-04 04:00:02] 2026-03-04 02:51:49,484 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,502 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 04:00:02] 2026-03-04 02:51:49,502 | INFO     | job 7036288394 has completed (purged errors)
[2026-03-04 04:00:02] 2026-03-04 02:51:49,502 | INFO     | overall cleanup function is called
[2026-03-04 04:00:02] 2026-03-04 02:51:50,508 | INFO     | --- collectZombieJob: --- 10, [1664054]
[2026-03-04 04:00:02] 2026-03-04 02:51:50,508 | INFO     | zombie collector waiting for pid 1664054
[2026-03-04 04:00:02] 2026-03-04 02:51:50,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 04:00:02] 2026-03-04 02:51:50,508 | INFO     | collected zombie processes
[2026-03-04 04:00:02] 2026-03-04 02:51:50,508 | INFO     | will attempt to kill all subprocesses of pid=1664054
[2026-03-04 04:00:02] 2026-03-04 02:51:51,007 | INFO     | process IDs to be killed: [1664054] (in reverse order)
[2026-03-04 04:00:02] 2026-03-04 02:51:51,243 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 04:00:02] 2026-03-04 02:51:51,243 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 04:00:02] 2026-03-04 02:51:51,276 | INFO     | did not find any defunct processes belonging to 1664054
[2026-03-04 04:00:02] 2026-03-04 02:51:51,310 | INFO     | did not find any defunct processes belonging to 1664054
[2026-03-04 04:00:02] 2026-03-04 02:51:51,310 | INFO     | ready for new job
[2026-03-04 04:00:02] 2026-03-04 02:51:51,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 04:00:02] 2026-03-04 02:51:51,312 | INFO     | **************************************
[2026-03-04 04:00:02] 2026-03-04 02:51:51,312 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 04:00:02] 2026-03-04 02:51:51,312 | INFO     | **************************************
[2026-03-04 04:00:02] 2026-03-04 02:51:51,312 | INFO     | 
[2026-03-04 04:00:02] 2026-03-04 02:51:51,318 | INFO     | architecture information:
[2026-03-04 04:00:02] 2026-03-04 02:51:51,319 | INFO     | executing command: cat /etc/os-release
[2026-03-04 04:00:02] 2026-03-04 02:51:51,332 | INFO     | cat /etc/os-release:
[2026-03-04 04:00:02] NAME="CentOS Linux"
[2026-03-04 04:00:02] VERSION="7 (Core)"
[2026-03-04 04:00:02] ID="centos"
[2026-03-04 04:00:02] ID_LIKE="rhel fedora"
[2026-03-04 04:00:02] VERSION_ID="7"
[2026-03-04 04:00:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 04:00:02] ANSI_COLOR="0;31"
[2026-03-04 04:00:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 04:00:02] HOME_URL="https://www.centos.org/"
[2026-03-04 04:00:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 04:00:02] 
[2026-03-04 04:00:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 04:00:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 04:00:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 04:00:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 04:00:02] 
[2026-03-04 04:00:02] 2026-03-04 02:51:51,333 | INFO     | **************************************
[2026-03-04 04:00:02] 2026-03-04 02:51:51,835 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-04 04:00:02] 2026-03-04 02:51:51,850 | INFO     | sufficient remaining disk space (20465057792 B)
[2026-03-04 04:00:02] 2026-03-04 02:51:51,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 04:00:02] 2026-03-04 02:51:51,850 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 04:00:02] 2026-03-04 02:51:51,850 | INFO     | update_server=False
[2026-03-04 04:00:02] 2026-03-04 02:51:51,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 04:00:02] 2026-03-04 02:51:51,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 04:00:02] 2026-03-04 02:51:52,253 | WARNING  | process 1664054 can no longer be monitored (due to stat problems) - aborting
[2026-03-04 04:00:02] 2026-03-04 02:51:52,365 | INFO     | all data control threads have been joined
[2026-03-04 04:00:02] 2026-03-04 02:51:52,608 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:00:02] 2026-03-04 02:51:52,609 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:00:02] 2026-03-04 02:51:52,609 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-04 04:00:02] 2026-03-04 02:51:52,609 | WARNING  | maxPSS not found in memory monitor output
[2026-03-04 04:00:02] 2026-03-04 02:51:52,609 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036288394/payload.stdout) since it has not been created yet
[2026-03-04 04:00:02] 2026-03-04 02:51:52,609 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-04 04:00:02] 2026-03-04 02:51:52,625 | INFO     | sufficient remaining disk space (20464009216 B)
[2026-03-04 04:00:02] 2026-03-04 02:51:52,626 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-04 04:00:02] 2026-03-04 02:51:52,626 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7036288394/HITS.48838577._003363.pool.root.1 since it does not exist
[2026-03-04 04:00:02] 2026-03-04 02:51:52,855 | INFO     | [job] retrieve thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:52,879 | INFO     | all job control threads have been joined
[2026-03-04 04:00:02] 2026-03-04 02:51:52,898 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:53,033 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:53,050 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:53,124 | INFO     | all payload control threads have been joined
[2026-03-04 04:00:02] 2026-03-04 02:51:53,138 | INFO     | number of running child processes to parent process 1664054: 1
[2026-03-04 04:00:02] 2026-03-04 02:51:53,138 | INFO     | maximum number of monitored processes: 6
[2026-03-04 04:00:02] 2026-03-04 02:51:53,138 | INFO     | aborting job monitoring since job object (job id=7036288394) has expired
[2026-03-04 04:00:02] 2026-03-04 02:51:53,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:00:02] 2026-03-04 02:51:53,138 | INFO     | will abort loop
[2026-03-04 04:00:02] 2026-03-04 02:51:53,311 | INFO     | [data] copytool_in thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:53,370 | INFO     | [data] control thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:53,527 | INFO     | [payload] validate_post thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:53,855 | INFO     | [data] copytool_out thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:53,884 | INFO     | [job] control thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:54,129 | INFO     | [payload] control thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:54,143 | INFO     | [job] job monitor thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:54,192 | INFO     | [job] validate thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:54,347 | INFO     | [payload] failed_post thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:54,494 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:00:02] 2026-03-04 02:51:54,855 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 04:00:02] 2026-03-04 02:51:55,499 | INFO     | [job] queue monitor thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:51:58,861 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:52:02,434 | INFO     | job.realtimelogging is not enabled
[2026-03-04 04:00:02] 2026-03-04 02:52:03,439 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 04:00:02] 2026-03-04 02:52:21,760 | INFO     | PID=1658111 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 04:00:02] 2026-03-04 02:52:21,760 | INFO     | .. there are 39 such processes running
[2026-03-04 04:00:02] 2026-03-04 02:52:21,761 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 04:00:02] 2026-03-04 02:52:21,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 04:00:02] 2026-03-04 02:52:21,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 04:00:02] 2026-03-04 02:52:51,932 | INFO     | [monitor] cgroup control has ended
[2026-03-04 04:00:02] 2026-03-04 02:52:52,283 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22511861253952)>', '<ExcThread(monitor, started 22511621515008)>']
[2026-03-04 04:00:02] 2026-03-04 02:52:52,908 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 04:00:02] 2026-03-04 02:52:52,908 | INFO     | [monitor] control thread has ended
[2026-03-04 04:00:02] 2026-03-04 02:52:57,308 | INFO     | all workflow threads have been joined
[2026-03-04 04:00:02] 2026-03-04 02:52:57,308 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 04:00:02] 2026-03-04 02:52:57,308 | INFO     | traces error code: 0
[2026-03-04 04:00:02] 2026-03-04 02:52:57,309 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 04:00:02] 2026-03-04 02:52:57,498 [wrapper] ==== pilot stdout END ====
[2026-03-04 04:00:02] 2026-03-04 02:52:57,500 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 04:00:02] 2026-03-04 02:52:57,502 [wrapper] pilotpid: 1658111
[2026-03-04 04:00:02] 2026-03-04 02:52:57,505 [wrapper] Pilot exit status: 0
[2026-03-04 04:00:02] 2026-03-04 02:52:57,513 [wrapper] pandaids: 7036288394
[2026-03-04 04:00:02] 2026-03-04 02:52:57,662 [wrapper] cleanup supervisor_pilot 2295931 1658112
[2026-03-04 04:00:02] 2026-03-04 02:52:57,665 [wrapper] Test setup, not cleaning
[2026-03-04 04:00:02] 2026-03-04 02:52:57,668 [wrapper] apfmon messages muted
[2026-03-04 04:00:02] 2026-03-04 02:52:57,672 [wrapper] ==== wrapper stdout END ====
[2026-03-04 04:00:02] 2026-03-04 02:52:57,675 [wrapper] ==== wrapper stderr END ====
[2026-03-04 04:00:02]  *** Error codes and diagnostics ***
[2026-03-04 04:00:02]     "exeErrorCode": 0,
[2026-03-04 04:00:02]     "exeErrorDiag": "",
[2026-03-04 04:00:02]     "pilotErrorCode": 0,
[2026-03-04 04:00:02]     "pilotErrorDiag": "",
[2026-03-04 04:00:02]  *** Listing of results directory ***
[2026-03-04 04:00:02] total 513720
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc    584627 Mar  3 12:44 pilot3.tar.gz
[2026-03-04 04:00:02] -rwx------. 1 boinc boinc     36322 Mar  3 12:47 runpilot2-wrapper.sh
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc      5111 Mar  3 12:49 queuedata.json
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc       100 Mar  4 02:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 04:00:02] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 02:12 run_atlas
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc       105 Mar  4 02:12 job.xml
[2026-03-04 04:00:02] -rw-r--r--. 2 boinc boinc     15845 Mar  4 02:12 start_atlas.sh
[2026-03-04 04:00:02] drwxrwx--x. 2 boinc boinc      4096 Mar  4 02:12 shared
[2026-03-04 04:00:02] -rw-r--r--. 2 boinc boinc    597973 Mar  4 02:12 input.tar.gz
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc      6703 Mar  4 02:12 init_data.xml
[2026-03-04 04:00:02] -rw-r--r--. 2 boinc boinc 291658948 Mar  4 02:12 EVNT.48220197._000130.pool.root.1
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc         0 Mar  4 02:12 boinc_lockfile
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc      2567 Mar  4 02:12 pandaJob.out
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc    998484 Mar  4 02:12 agis_schedconf.cvmfs.json
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc   1516092 Mar  4 02:12 agis_ddmendpoints.agis.ALL.json
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc       445 Mar  4 02:12 workernode_map.json
[2026-03-04 04:00:02] drwx------. 5 boinc boinc      4096 Mar  4 02:12 pilot3
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc 228211627 Mar  4 03:51 HITS.48838577._003363.pool.root.1
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc       528 Mar  4 03:51 boinc_task_state.xml
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc      1032 Mar  4 03:51 memory_monitor_summary.json
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc    271207 Mar  4 03:51 log.48838577._003363.job.log.tgz.1
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc      6356 Mar  4 03:51 heartbeat.json
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc        95 Mar  4 03:52 pilot_heartbeat.json
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc      6447 Mar  4 03:52 pilotlog.txt
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc    856633 Mar  4 03:52 log.48838577._003363.job.log.1
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc       357 Mar  4 03:52 output.list
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc       620 Mar  4 03:52 runtime_log
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc   1146880 Mar  4 03:52 result.tar.gz
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc      9221 Mar  4 03:52 runtime_log.err
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc       663 Mar  4 03:52 9jbMDm0OdH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7WGLDmv5Qlom.diag
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc        26 Mar  4 03:59 wrapper_checkpoint.txt
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc      8192 Mar  4 04:00 boinc_mmap_file
[2026-03-04 04:00:02] -rw-r--r--. 1 boinc boinc     12326 Mar  4 04:00 stderr.txt
[2026-03-04 04:00:02] HITS file was successfully produced:
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc 228211627 Mar  4 03:51 shared/HITS.pool.root.1
[2026-03-04 04:00:02]  *** Contents of shared directory: ***
[2026-03-04 04:00:02] total 509412
[2026-03-04 04:00:02] -rw-r--r--. 2 boinc boinc     15845 Mar  4 02:12 start_atlas.sh
[2026-03-04 04:00:02] -rw-r--r--. 2 boinc boinc    597973 Mar  4 02:12 input.tar.gz
[2026-03-04 04:00:02] -rw-r--r--. 2 boinc boinc 291658948 Mar  4 02:12 ATLAS.root_0
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc 228211627 Mar  4 03:51 HITS.pool.root.1
[2026-03-04 04:00:02] -rw-------. 1 boinc boinc   1146880 Mar  4 03:52 result.tar.gz
04:00:03 (1653537): run_atlas exited; CPU time 23146.153051
04:00:03 (1653537): called boinc_finish(0)

</stderr_txt>
]]>

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