Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:12:48 (27313): wrapper (7.7.26015): starting
10:12:48 (27313): wrapper: running run_atlas (--nthreads 8)
[2026-03-03 10:12:48] Arguments: --nthreads 8
[2026-03-03 10:12:48] Threads: 8
[2026-03-03 10:12:48] Checking for CVMFS
[2026-03-03 10:12:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 10:12:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 10:12:48] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 10:12:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 10:12:48] 2.11.2.0 2895 213144 112772 156848 0 49 10641353 20275201 1 130560 0 57837681 99.848 14837406 30443 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-03 10:12:48] CVMFS is ok
[2026-03-03 10:12:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 10:12:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 10:12:48] Further information can be found at the LHC@home message board.
[2026-03-03 10:12:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 10:12:48] Checking for apptainer binary...
[2026-03-03 10:12:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 10:12:48] Running /usr/bin/apptainer --version
[2026-03-03 10:12:49] apptainer version 1.3.2-1.el7
[2026-03-03 10:12:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 10:12:50] c-204-7.aglt2.org
[2026-03-03 10:12:50] apptainer works
[2026-03-03 10:12:50] Set ATHENA_PROC_NUMBER=8
[2026-03-03 10:12:50] Set ATHENA_CORE_NUMBER=8
[2026-03-03 10:12:50] Starting ATLAS job with PandaID=7036250493
[2026-03-03 10:12:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 11:54:31]  *** The last 200 lines of the pilot log: ***
[2026-03-03 11:54:31]  replicas=None
[2026-03-03 11:54:31]  scope=mc23_13p6TeV
[2026-03-03 11:54:31]  status=None
[2026-03-03 11:54:31]  status_code=0
[2026-03-03 11:54:31]  storage_token=
[2026-03-03 11:54:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7036250493/log.48700946._002964.job.log.tgz.1
[2026-03-03 11:54:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/c2/log.48700946._002964.job.log.tgz.1
[2026-03-03 11:54:31]  workdir=None
[2026-03-03 11:54:31] ]
[2026-03-03 11:54:31] 2026-03-03 16:54:07,110 | INFO     | transferring file log.48700946._002964.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7036250493/log.48700946._002964.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-03 11:54:31] 2026-03-03 16:54:07,111 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7036250493/log.48700946._002964.job.log.tgz.1 /tmp/boinchome/slots/0/log.48700946._002964.job
[2026-03-03 11:54:31] 2026-03-03 16:54:07,133 | INFO     | adding to output.list: log.48700946._002964.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/02/c2/log.48700946._002964.job.log.tg
[2026-03-03 11:54:31] 2026-03-03 16:54:07,134 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 11:54:31] 2026-03-03 16:54:07,135 | INFO     | summary of transferred files:
[2026-03-03 11:54:31] 2026-03-03 16:54:07,135 | INFO     |  -- lfn=log.48700946._002964.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 11:54:31] 2026-03-03 16:54:07,135 | INFO     | stage-out finished correctly
[2026-03-03 11:54:31] 2026-03-03 16:54:07,700 | INFO     | time since job start (6052s) is within the limit (349056.0s)
[2026-03-03 11:54:31] 2026-03-03 16:54:08,455 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 11:54:31] 2026-03-03 16:54:09,623 | INFO     | job 7036250493 has state=finished
[2026-03-03 11:54:31] 2026-03-03 16:54:09,624 | INFO     | preparing for final server update for job 7036250493 in state='finished'
[2026-03-03 11:54:31] 2026-03-03 16:54:09,629 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7036250493/jobReport.json
[2026-03-03 11:54:31] 2026-03-03 16:54:09,632 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-03 11:54:31] 2026-03-03 16:54:09,633 | INFO     | this job has now completed (state=finished)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,633 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,633 | INFO     | log transfer has been attempted: DONE
[2026-03-03 11:54:31] 2026-03-03 16:54:09,633 | INFO     | job 7036250493 has finished - writing final server update
[2026-03-03 11:54:31] 2026-03-03 16:54:09,634 | INFO     | total number of processed events: 400 (read)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,636 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7036250493/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,637 | INFO     | extracted standard info from prmon json
[2026-03-03 11:54:31] 2026-03-03 16:54:09,637 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 11:54:31] 2026-03-03 16:54:09,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 11:54:31] 2026-03-03 16:54:09,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 11:54:31] 2026-03-03 16:54:09,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 11:54:31] 2026-03-03 16:54:09,641 | INFO     | fitting pss+swap vs Time
[2026-03-03 11:54:31] 2026-03-03 16:54:09,641 | INFO     | sum of square deviations: 241429643.0
[2026-03-03 11:54:31] 2026-03-03 16:54:09,642 | INFO     | sum of deviations: -2365662807.5
[2026-03-03 11:54:31] 2026-03-03 16:54:09,642 | INFO     | mean x: 1772553901.5
[2026-03-03 11:54:31] 2026-03-03 16:54:09,642 | INFO     | mean y: 2518291.4239130435
[2026-03-03 11:54:31] 2026-03-03 16:54:09,642 | INFO     | intersect: 17370993789.967262
[2026-03-03 11:54:31] 2026-03-03 16:54:09,643 | INFO     | chi2: 0.03203139350695477
[2026-03-03 11:54:31] 2026-03-03 16:54:09,643 | INFO     | current memory leak: -9.80 B/s (using 92 data points, chi2=0.03)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,643 | INFO     | could have reported an average CPU frequency of 1629 MHz (7 samples)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,644 | INFO     | ..............................
[2026-03-03 11:54:31] 2026-03-03 16:54:09,644 | INFO     | . Timing measurements:
[2026-03-03 11:54:31] 2026-03-03 16:54:09,644 | INFO     | . get job = 0 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,644 | INFO     | . initial setup = 8 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,644 | INFO     | . payload setup = 8 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,645 | INFO     | . stage-in = 0 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,645 | INFO     | . payload execution = 6026 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,645 | INFO     | . stage-out = 0 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,645 | INFO     | . log creation = 0 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,645 | INFO     | ..............................
[2026-03-03 11:54:31] 2026-03-03 16:54:09,710 | INFO     | time since job start (6054s) is within the limit (349056.0s)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,759 | INFO     | 
[2026-03-03 11:54:31] 2026-03-03 16:54:09,760 | INFO     | job summary report
[2026-03-03 11:54:31] 2026-03-03 16:54:09,760 | INFO     | --------------------------------------------------
[2026-03-03 11:54:31] 2026-03-03 16:54:09,760 | INFO     | PanDA job id: 7036250493
[2026-03-03 11:54:31] 2026-03-03 16:54:09,760 | INFO     | task id: 48700946
[2026-03-03 11:54:31] 2026-03-03 16:54:09,760 | INFO     | errors: (none)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,761 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 11:54:31] 2026-03-03 16:54:09,761 | INFO     | pilot state: finished 
[2026-03-03 11:54:31] 2026-03-03 16:54:09,761 | INFO     | transexitcode: 0
[2026-03-03 11:54:31] 2026-03-03 16:54:09,761 | INFO     | exeerrorcode: 0
[2026-03-03 11:54:31] 2026-03-03 16:54:09,761 | INFO     | exeerrordiag: 
[2026-03-03 11:54:31] 2026-03-03 16:54:09,761 | INFO     | exitcode: 0
[2026-03-03 11:54:31] 2026-03-03 16:54:09,762 | INFO     | exitmsg: OK
[2026-03-03 11:54:31] 2026-03-03 16:54:09,762 | INFO     | cpuconsumptiontime: 43204 s
[2026-03-03 11:54:31] 2026-03-03 16:54:09,762 | INFO     | nevents: 400
[2026-03-03 11:54:31] 2026-03-03 16:54:09,762 | INFO     | neventsw: 0
[2026-03-03 11:54:31] 2026-03-03 16:54:09,762 | INFO     | pid: 3481
[2026-03-03 11:54:31] 2026-03-03 16:54:09,762 | INFO     | pgrp: 3481
[2026-03-03 11:54:31] 2026-03-03 16:54:09,763 | INFO     | corecount: 8
[2026-03-03 11:54:31] 2026-03-03 16:54:09,763 | INFO     | event service: False
[2026-03-03 11:54:31] 2026-03-03 16:54:09,763 | INFO     | sizes: {0: 2286560, 1: 2287021, 11: 2287021, 6039: 2313691, 6041: 2322689, 6043: 2322745, 6044: 2323067}
[2026-03-03 11:54:31] 2026-03-03 16:54:09,763 | INFO     | --------------------------------------------------
[2026-03-03 11:54:31] 2026-03-03 16:54:09,763 | INFO     | 
[2026-03-03 11:54:31] 2026-03-03 16:54:09,764 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-03 11:54:31] 2026-03-03 16:54:09,791 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,791 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,792 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,792 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,792 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,794 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,795 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 11:54:31] 2026-03-03 16:54:09,795 | INFO     | job 7036250493 has completed (purged errors)
[2026-03-03 11:54:31] 2026-03-03 16:54:09,795 | INFO     | overall cleanup function is called
[2026-03-03 11:54:31] 2026-03-03 16:54:10,804 | INFO     | --- collectZombieJob: --- 10, [3481]
[2026-03-03 11:54:31] 2026-03-03 16:54:10,804 | INFO     | zombie collector waiting for pid 3481
[2026-03-03 11:54:31] 2026-03-03 16:54:10,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 11:54:31] 2026-03-03 16:54:10,805 | INFO     | collected zombie processes
[2026-03-03 11:54:31] 2026-03-03 16:54:10,805 | INFO     | will attempt to kill all subprocesses of pid=3481
[2026-03-03 11:54:31] 2026-03-03 16:54:10,919 | INFO     | process IDs to be killed: [3481] (in reverse order)
[2026-03-03 11:54:31] 2026-03-03 16:54:10,983 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 11:54:31] 2026-03-03 16:54:10,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 11:54:31] 2026-03-03 16:54:10,987 | INFO     | did not find any defunct processes belonging to 3481
[2026-03-03 11:54:31] 2026-03-03 16:54:10,991 | INFO     | did not find any defunct processes belonging to 3481
[2026-03-03 11:54:31] 2026-03-03 16:54:10,992 | INFO     | ready for new job
[2026-03-03 11:54:31] 2026-03-03 16:54:10,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 11:54:31] 2026-03-03 16:54:10,994 | INFO     | **************************************
[2026-03-03 11:54:31] 2026-03-03 16:54:10,994 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 11:54:31] 2026-03-03 16:54:10,994 | INFO     | **************************************
[2026-03-03 11:54:31] 2026-03-03 16:54:10,995 | INFO     | 
[2026-03-03 11:54:31] 2026-03-03 16:54:10,995 | INFO     | architecture information:
[2026-03-03 11:54:31] 2026-03-03 16:54:10,996 | INFO     | executing command: cat /etc/os-release
[2026-03-03 11:54:31] 2026-03-03 16:54:11,015 | INFO     | cat /etc/os-release:
[2026-03-03 11:54:31] NAME="CentOS Linux"
[2026-03-03 11:54:31] VERSION="7 (Core)"
[2026-03-03 11:54:31] ID="centos"
[2026-03-03 11:54:31] ID_LIKE="rhel fedora"
[2026-03-03 11:54:31] VERSION_ID="7"
[2026-03-03 11:54:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 11:54:31] ANSI_COLOR="0;31"
[2026-03-03 11:54:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 11:54:31] HOME_URL="https://www.centos.org/"
[2026-03-03 11:54:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 11:54:31] 
[2026-03-03 11:54:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 11:54:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 11:54:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 11:54:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 11:54:31] 
[2026-03-03 11:54:31] 2026-03-03 16:54:11,016 | INFO     | **************************************
[2026-03-03 11:54:31] 2026-03-03 16:54:11,339 | WARNING  | process 3481 can no longer be monitored (due to stat problems) - aborting
[2026-03-03 11:54:31] 2026-03-03 16:54:11,418 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:54:31] 2026-03-03 16:54:11,418 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:54:31] 2026-03-03 16:54:11,419 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-03 11:54:31] 2026-03-03 16:54:11,419 | WARNING  | maxPSS not found in memory monitor output
[2026-03-03 11:54:31] 2026-03-03 16:54:11,420 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7036250493/payload.stdout) since it has not been created yet
[2026-03-03 11:54:31] 2026-03-03 16:54:11,420 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 11:54:31] 2026-03-03 16:54:11,439 | INFO     | sufficient remaining disk space (18667798528 B)
[2026-03-03 11:54:31] 2026-03-03 16:54:11,439 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-03 11:54:31] 2026-03-03 16:54:11,439 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7036250493/HITS.48700946._002964.pool.root.1 since it does not exist
[2026-03-03 11:54:31] 2026-03-03 16:54:11,518 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-03 11:54:31] 2026-03-03 16:54:11,537 | INFO     | sufficient remaining disk space (18667798528 B)
[2026-03-03 11:54:31] 2026-03-03 16:54:11,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 11:54:31] 2026-03-03 16:54:11,538 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 11:54:31] 2026-03-03 16:54:11,539 | INFO     | update_server=False
[2026-03-03 11:54:31] 2026-03-03 16:54:11,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 11:54:31] 2026-03-03 16:54:11,539 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-03 11:54:31] 2026-03-03 16:54:11,540 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 11:54:31] 2026-03-03 16:54:11,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 11:54:31] 2026-03-03 16:54:11,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 11:54:31] 2026-03-03 16:54:11,540 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:54:31] 2026-03-03 16:54:11,546 | INFO     | number of running child processes to parent process 3481: 1
[2026-03-03 11:54:31] 2026-03-03 16:54:11,546 | INFO     | maximum number of monitored processes: 6
[2026-03-03 11:54:31] 2026-03-03 16:54:11,546 | INFO     | aborting job monitoring since job object (job id=7036250493) has expired
[2026-03-03 11:54:31] 2026-03-03 16:54:11,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:54:31] 2026-03-03 16:54:11,547 | INFO     | will abort loop
[2026-03-03 11:54:31] 2026-03-03 16:54:12,031 | INFO     | all data control threads have been joined
[2026-03-03 11:54:31] 2026-03-03 16:54:12,545 | INFO     | [job] retrieve thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:12,546 | INFO     | [job] queue monitor thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:12,552 | INFO     | [job] job monitor thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:12,564 | INFO     | [data] copytool_in thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:12,572 | INFO     | all payload control threads have been joined
[2026-03-03 11:54:31] 2026-03-03 16:54:12,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 11:54:31] 2026-03-03 16:54:12,853 | INFO     | [payload] validate_post thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:12,948 | INFO     | all job control threads have been joined
[2026-03-03 11:54:31] 2026-03-03 16:54:13,013 | INFO     | [payload] failed_post thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,037 | INFO     | [data] control thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,248 | INFO     | [job] validate thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,298 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,513 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,521 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,577 | INFO     | [payload] control thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,830 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:13,954 | INFO     | [job] control thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:14,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 11:54:31] 2026-03-03 16:54:14,751 | INFO     | [data] copytool_out thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:18,579 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 11:54:31] 2026-03-03 16:54:24,077 | INFO     | [monitor] cgroup control has ended
[2026-03-03 11:54:31] 2026-03-03 16:54:26,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661918508864)>', '<ExcThread(monitor, started 139661615798016)>']
[2026-03-03 11:54:31] 2026-03-03 16:54:26,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 11:54:31] 2026-03-03 16:54:26,590 | INFO     | [monitor] control thread has ended
[2026-03-03 11:54:31] 2026-03-03 16:54:31,132 | INFO     | all workflow threads have been joined
[2026-03-03 11:54:31] 2026-03-03 16:54:31,132 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 11:54:31] 2026-03-03 16:54:31,138 | INFO     | traces error code: 0
[2026-03-03 11:54:31] 2026-03-03 16:54:31,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 11:54:31] 2026-03-03 16:54:31,259 [wrapper] ==== pilot stdout END ====
[2026-03-03 11:54:31] 2026-03-03 16:54:31,263 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 11:54:31] 2026-03-03 16:54:31,268 [wrapper] pilotpid: 31397
[2026-03-03 11:54:31] 2026-03-03 16:54:31,272 [wrapper] Pilot exit status: 0
[2026-03-03 11:54:31] 2026-03-03 16:54:31,289 [wrapper] pandaids: 7036250493
[2026-03-03 11:54:31] 2026-03-03 16:54:31,329 [wrapper] cleanup supervisor_pilot  6728 31398
[2026-03-03 11:54:31] 2026-03-03 16:54:31,334 [wrapper] Test setup, not cleaning
[2026-03-03 11:54:31] 2026-03-03 16:54:31,339 [wrapper] apfmon messages muted
[2026-03-03 11:54:31] 2026-03-03 16:54:31,344 [wrapper] ==== wrapper stdout END ====
[2026-03-03 11:54:31] 2026-03-03 16:54:31,349 [wrapper] ==== wrapper stderr END ====
[2026-03-03 11:54:31]  *** Error codes and diagnostics ***
[2026-03-03 11:54:31]     "exeErrorCode": 0,
[2026-03-03 11:54:31]     "exeErrorDiag": "",
[2026-03-03 11:54:31]     "pilotErrorCode": 0,
[2026-03-03 11:54:31]     "pilotErrorDiag": "",
[2026-03-03 11:54:31]  *** Listing of results directory ***
[2026-03-03 11:54:31] total 331708
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas    584627 Mar  3 03:25 pilot3.tar.gz
[2026-03-03 11:54:31] -rwx------ 1 boincer umatlas     36322 Mar  3 04:01 runpilot2-wrapper.sh
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas      5111 Mar  3 04:01 queuedata.json
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas       100 Mar  3 10:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 11:54:31] -rwxr-xr-x 1 boincer umatlas      7986 Mar  3 10:12 run_atlas
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas       105 Mar  3 10:12 job.xml
[2026-03-03 11:54:31] -rw-r--r-- 2 boincer umatlas 192692532 Mar  3 10:12 EVNT.48700944._000117.pool.root.1
[2026-03-03 11:54:31] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 10:12 start_atlas.sh
[2026-03-03 11:54:31] drwxrwx--x 2 boincer umatlas      4096 Mar  3 10:12 shared
[2026-03-03 11:54:31] -rw-r--r-- 2 boincer umatlas    597929 Mar  3 10:12 input.tar.gz
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas         0 Mar  3 10:12 boinc_lockfile
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas      2500 Mar  3 10:12 pandaJob.out
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas        57 Mar  3 10:12 setup.sh.local
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas    998442 Mar  3 10:13 agis_schedconf.cvmfs.json
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas   1516104 Mar  3 10:13 agis_ddmendpoints.agis.ALL.json
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas       431 Mar  3 10:13 workernode_map.json
[2026-03-03 11:54:31] drwx------ 5 boincer umatlas      4096 Mar  3 10:13 pilot3
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas      5909 Mar  3 11:47 init_data.xml
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas        95 Mar  3 11:53 pilot_heartbeat.json
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas 140622656 Mar  3 11:53 HITS.48700946._002964.pool.root.1
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas      1046 Mar  3 11:54 memory_monitor_summary.json
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas      8192 Mar  3 11:54 boinc_mmap_file
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas        27 Mar  3 11:54 wrapper_checkpoint.txt
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas    351586 Mar  3 11:54 log.48700946._002964.job.log.tgz.1
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas       529 Mar  3 11:54 boinc_task_state.xml
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas      6395 Mar  3 11:54 heartbeat.json
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas      6027 Mar  3 11:54 pilotlog.txt
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas    861581 Mar  3 11:54 log.48700946._002964.job.log.1
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas       357 Mar  3 11:54 output.list
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas       620 Mar  3 11:54 runtime_log
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas   1228800 Mar  3 11:54 result.tar.gz
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas       657 Mar  3 11:54 rZLMDmQoaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmO5DLDmjwNBum.diag
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas      9336 Mar  3 11:54 runtime_log.err
[2026-03-03 11:54:31] -rw-r--r-- 1 boincer umatlas     21938 Mar  3 11:54 stderr.txt
[2026-03-03 11:54:31] HITS file was successfully produced:
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas 140622656 Mar  3 11:53 shared/HITS.pool.root.1
[2026-03-03 11:54:31]  *** Contents of shared directory: ***
[2026-03-03 11:54:31] total 327308
[2026-03-03 11:54:31] -rw-r--r-- 2 boincer umatlas 192692532 Mar  3 10:12 ATLAS.root_0
[2026-03-03 11:54:31] -rw-r--r-- 2 boincer umatlas     15845 Mar  3 10:12 start_atlas.sh
[2026-03-03 11:54:31] -rw-r--r-- 2 boincer umatlas    597929 Mar  3 10:12 input.tar.gz
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas 140622656 Mar  3 11:53 HITS.pool.root.1
[2026-03-03 11:54:31] -rw------- 1 boincer umatlas   1228800 Mar  3 11:54 result.tar.gz
11:54:33 (27313): run_atlas exited; CPU time 43176.024521
11:54:33 (27313): called boinc_finish(0)

</stderr_txt>
]]>

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