Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:51:07 (1658651): wrapper (7.7.26015): starting
08:51:07 (1658651): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 08:51:07] Arguments: --nthreads 4
[2026-03-04 08:51:07] Threads: 4
[2026-03-04 08:51:07] Checking for CVMFS
[2026-03-04 08:51:07] No cvmfs_config command found, will try listing directly
[2026-03-04 08:51:07] CVMFS is ok
[2026-03-04 08:51:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 08:51:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 08:51:07] Further information can be found at the LHC@home message board.
[2026-03-04 08:51:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 08:51:07] Checking for apptainer binary...
[2026-03-04 08:51:07] which: no apptainer in ((null))
[2026-03-04 08:51:07] apptainer is not installed, using version from CVMFS
[2026-03-04 08:51:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 08:51:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-03-04 08:51:08] apptainer works
[2026-03-04 08:51:08] Set ATHENA_PROC_NUMBER=4
[2026-03-04 08:51:08] Set ATHENA_CORE_NUMBER=4
[2026-03-04 08:51:08] Starting ATLAS job with PandaID=7036254842
[2026-03-04 08:51:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 11:51:44]  *** The last 200 lines of the pilot log: ***
[2026-03-04 11:51:44] 2026-03-04 10:50:39,194 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot40/slots/0/workernode_map.json
[2026-03-04 11:51:44] 2026-03-04 10:50:39,194 | INFO     | this job has now completed (state=finished)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,194 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,194 | INFO     | log transfer has been attempted: DONE
[2026-03-04 11:51:44] 2026-03-04 10:50:39,194 | INFO     | job 7036254842 has finished - writing final server update
[2026-03-04 11:51:44] 2026-03-04 10:50:39,195 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_973628/.job.ad'
[2026-03-04 11:51:44] 2026-03-04 10:50:39,195 | INFO     | total number of processed events: 400 (read)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,207 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-7036254842/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,207 | INFO     | extracted standard info from prmon json
[2026-03-04 11:51:44] 2026-03-04 10:50:39,208 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 11:51:44] 2026-03-04 10:50:39,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 11:51:44] 2026-03-04 10:50:39,208 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 11:51:44] 2026-03-04 10:50:39,208 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 11:51:44] 2026-03-04 10:50:39,211 | INFO     | fitting pss+swap vs Time
[2026-03-04 11:51:44] 2026-03-04 10:50:39,212 | INFO     | sum of square deviations: 1690450300.0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,213 | INFO     | sum of deviations: 18484473028.000004
[2026-03-04 11:51:44] 2026-03-04 10:50:39,213 | INFO     | mean x: 1772616042.5
[2026-03-04 11:51:44] 2026-03-04 10:50:39,213 | INFO     | mean y: 2340458.6136363638
[2026-03-04 11:51:44] 2026-03-04 10:50:39,213 | INFO     | intersect: -19380585751.397602
[2026-03-04 11:51:44] 2026-03-04 10:50:39,213 | INFO     | chi2: 1.359640342580915
[2026-03-04 11:51:44] 2026-03-04 10:50:39,214 | INFO     | sum of square deviations: 1550429070.0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,215 | INFO     | sum of deviations: 17878114484.0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,215 | INFO     | mean x: 1772615890.0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,215 | INFO     | mean y: 2339798.216374269
[2026-03-04 11:51:44] 2026-03-04 10:50:39,215 | INFO     | intersect: -20437827656.575706
[2026-03-04 11:51:44] 2026-03-04 10:50:39,215 | INFO     | chi2: 1.3607381700672805
[2026-03-04 11:51:44] 2026-03-04 10:50:39,216 | INFO     | current chi2=1.3607381700672805 (change=-0.08074396235416358 %)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,216 | INFO     | right removable region: 170
[2026-03-04 11:51:44] 2026-03-04 10:50:39,216 | INFO     | sum of square deviations: 1550429070.0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,217 | INFO     | sum of deviations: -4594241229.999999
[2026-03-04 11:51:44] 2026-03-04 10:50:39,217 | INFO     | mean x: 1772616195.0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,217 | INFO     | mean y: 2365239.777777778
[2026-03-04 11:51:44] 2026-03-04 10:50:39,217 | INFO     | intersect: 5254992764.385993
[2026-03-04 11:51:44] 2026-03-04 10:50:39,217 | INFO     | chi2: 0.0267400105171046
[2026-03-04 11:51:44] 2026-03-04 10:50:39,218 | INFO     | current chi2=0.0267400105171046 (change=98.03330265514587 %)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,218 | INFO     | sum of square deviations: 1418361477.5
[2026-03-04 11:51:44] 2026-03-04 10:50:39,219 | INFO     | sum of deviations: -4501917577.499999
[2026-03-04 11:51:44] 2026-03-04 10:50:39,219 | INFO     | mean x: 1772616347.5
[2026-03-04 11:51:44] 2026-03-04 10:50:39,219 | INFO     | mean y: 2365101.078313253
[2026-03-04 11:51:44] 2026-03-04 10:50:39,219 | INFO     | intersect: 5628697188.889896
[2026-03-04 11:51:44] 2026-03-04 10:50:39,219 | INFO     | chi2: 0.022109789948984996
[2026-03-04 11:51:44] 2026-03-04 10:50:39,219 | INFO     | current chi2=0.022109789948984996 (change=17.31570212045288 %)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,220 | INFO     | left removable region: 20
[2026-03-04 11:51:44] 2026-03-04 10:50:39,220 | INFO     | sum of square deviations: 1046484737.5
[2026-03-04 11:51:44] 2026-03-04 10:50:39,221 | INFO     | sum of deviations: -29534065.00000026
[2026-03-04 11:51:44] 2026-03-04 10:50:39,221 | INFO     | mean x: 1772616469.5
[2026-03-04 11:51:44] 2026-03-04 10:50:39,221 | INFO     | mean y: 2359130.6533333333
[2026-03-04 11:51:44] 2026-03-04 10:50:39,221 | INFO     | intersect: 52386205.25296072
[2026-03-04 11:51:44] 2026-03-04 10:50:39,221 | INFO     | chi2: 0.008981003029834747
[2026-03-04 11:51:44] 2026-03-04 10:50:39,221 | INFO     | current memory leak: -0.03 B/s (using 150 data points, chi2=0.01)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | could have reported an average CPU frequency of 2692 MHz (9 samples)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | ..............................
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | . Timing measurements:
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | . get job = 0 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | . initial setup = 5 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | . payload setup = 5 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | . stage-in = 0 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,222 | INFO     | . payload execution = 10728 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,223 | INFO     | . stage-out = 1 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,223 | INFO     | . log creation = 0 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,223 | INFO     | ..............................
[2026-03-04 11:51:44] 2026-03-04 10:50:39,762 | INFO     | 
[2026-03-04 11:51:44] 2026-03-04 10:50:39,762 | INFO     | job summary report
[2026-03-04 11:51:44] 2026-03-04 10:50:39,762 | INFO     | --------------------------------------------------
[2026-03-04 11:51:44] 2026-03-04 10:50:39,762 | INFO     | PanDA job id: 7036254842
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | task id: 48838605
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | errors: (none)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | pilot state: finished 
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | transexitcode: 0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | exeerrorcode: 0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | exeerrordiag: 
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | exitcode: 0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | exitmsg: OK
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | cpuconsumptiontime: 41153 s
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | nevents: 400
[2026-03-04 11:51:44] 2026-03-04 10:50:39,763 | INFO     | neventsw: 0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | pid: 1667358
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | pgrp: 1667358
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | corecount: 4
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | event service: False
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | sizes: {0: 2286547, 1: 2287064, 12: 2287064, 10738: 2316171, 10740: 2325191, 10743: 2325247, 10744: 2325633}
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | --------------------------------------------------
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | 
[2026-03-04 11:51:44] 2026-03-04 10:50:39,764 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2026-03-04 11:51:44] 2026-03-04 10:50:39,785 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,785 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,785 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | job 7036254842 has completed (purged errors)
[2026-03-04 11:51:44] 2026-03-04 10:50:39,787 | INFO     | overall cleanup function is called
[2026-03-04 11:51:44] 2026-03-04 10:50:40,795 | INFO     | --- collectZombieJob: --- 10, [1667358]
[2026-03-04 11:51:44] 2026-03-04 10:50:40,795 | INFO     | zombie collector waiting for pid 1667358
[2026-03-04 11:51:44] 2026-03-04 10:50:40,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 11:51:44] 2026-03-04 10:50:40,796 | INFO     | collected zombie processes
[2026-03-04 11:51:44] 2026-03-04 10:50:40,797 | INFO     | will attempt to kill all subprocesses of pid=1667358
[2026-03-04 11:51:44] 2026-03-04 10:50:41,113 | INFO     | process IDs to be killed: [1667358] (in reverse order)
[2026-03-04 11:51:44] 2026-03-04 10:50:41,216 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 11:51:44] 2026-03-04 10:50:41,217 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 11:51:44] 2026-03-04 10:50:41,226 | INFO     | did not find any defunct processes belonging to 1667358
[2026-03-04 11:51:44] 2026-03-04 10:50:41,234 | INFO     | did not find any defunct processes belonging to 1667358
[2026-03-04 11:51:44] 2026-03-04 10:50:41,234 | INFO     | ready for new job
[2026-03-04 11:51:44] 2026-03-04 10:50:41,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 11:51:44] 2026-03-04 10:50:41,236 | INFO     | **************************************
[2026-03-04 11:51:44] 2026-03-04 10:50:41,237 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 11:51:44] 2026-03-04 10:50:41,237 | INFO     | **************************************
[2026-03-04 11:51:44] 2026-03-04 10:50:41,237 | INFO     | 
[2026-03-04 11:51:44] 2026-03-04 10:50:41,241 | INFO     | architecture information:
[2026-03-04 11:51:44] 2026-03-04 10:50:41,241 | INFO     | executing command: cat /etc/os-release
[2026-03-04 11:51:44] 2026-03-04 10:50:41,256 | INFO     | cat /etc/os-release:
[2026-03-04 11:51:44] NAME="CentOS Linux"
[2026-03-04 11:51:44] VERSION="7 (Core)"
[2026-03-04 11:51:44] ID="centos"
[2026-03-04 11:51:44] ID_LIKE="rhel fedora"
[2026-03-04 11:51:44] VERSION_ID="7"
[2026-03-04 11:51:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 11:51:44] ANSI_COLOR="0;31"
[2026-03-04 11:51:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 11:51:44] HOME_URL="https://www.centos.org/"
[2026-03-04 11:51:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 11:51:44] 
[2026-03-04 11:51:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 11:51:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 11:51:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 11:51:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 11:51:44] 
[2026-03-04 11:51:44] 2026-03-04 10:50:41,256 | INFO     | **************************************
[2026-03-04 11:51:44] 2026-03-04 10:50:41,759 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2026-03-04 11:51:44] 2026-03-04 10:50:41,776 | INFO     | sufficient remaining disk space (675912089600 B)
[2026-03-04 11:51:44] 2026-03-04 10:50:41,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 11:51:44] 2026-03-04 10:50:41,776 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 11:51:44] 2026-03-04 10:50:41,777 | INFO     | update_server=False
[2026-03-04 11:51:44] 2026-03-04 10:50:41,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 11:51:44] 2026-03-04 10:50:42,071 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 11:51:44] 2026-03-04 10:50:42,072 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 11:51:44] 2026-03-04 10:50:42,072 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:51:44] 2026-03-04 10:50:42,072 | INFO     | will abort loop
[2026-03-04 11:51:44] 2026-03-04 10:50:42,782 | INFO     | [job] retrieve thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:42,833 | INFO     | all data control threads have been joined
[2026-03-04 11:51:44] 2026-03-04 10:50:42,858 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:42,970 | INFO     | all payload control threads have been joined
[2026-03-04 11:51:44] 2026-03-04 10:50:42,979 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 11:51:44] 2026-03-04 10:50:43,077 | INFO     | [job] job monitor thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:43,172 | INFO     | all job control threads have been joined
[2026-03-04 11:51:44] 2026-03-04 10:50:43,176 | INFO     | [data] copytool_in thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:43,181 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:43,208 | INFO     | [payload] failed_post thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:43,838 | INFO     | [data] control thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:43,852 | INFO     | [job] validate thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:43,956 | INFO     | [payload] validate_post thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:43,975 | INFO     | [payload] control thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:44,073 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:44,173 | INFO     | [job] control thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:44,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 11:51:44] 2026-03-04 10:50:44,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 11:51:44] 2026-03-04 10:50:44,985 | INFO     | [data] copytool_out thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:45,330 | INFO     | [job] queue monitor thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:48,522 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:50:52,218 | INFO     | job.realtimelogging is not enabled
[2026-03-04 11:51:44] 2026-03-04 10:50:53,224 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 11:51:44] 2026-03-04 10:51:12,566 | INFO     | PID=1662619 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 11:51:44] 2026-03-04 10:51:12,567 | INFO     | .. there are 12 such processes running
[2026-03-04 11:51:44] 2026-03-04 10:51:12,568 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 11:51:44] 2026-03-04 10:51:12,568 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 11:51:44] 2026-03-04 10:51:12,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 11:51:44] 2026-03-04 10:51:17,050 [wrapper] supervise_pilot (15 min periods counter: 13)
[2026-03-04 11:51:44] 2026-03-04 10:51:38,514 | INFO     | [monitor] cgroup control has ended
[2026-03-04 11:51:44] 2026-03-04 10:51:39,095 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23243041945408)>', '<ExcThread(monitor, started 23242793543424)>']
[2026-03-04 11:51:44] 2026-03-04 10:51:39,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 11:51:44] 2026-03-04 10:51:39,685 | INFO     | [monitor] control thread has ended
[2026-03-04 11:51:44] 2026-03-04 10:51:44,119 | INFO     | all workflow threads have been joined
[2026-03-04 11:51:44] 2026-03-04 10:51:44,120 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 11:51:44] 2026-03-04 10:51:44,120 | INFO     | traces error code: 0
[2026-03-04 11:51:44] 2026-03-04 10:51:44,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 11:51:44] 2026-03-04 10:51:44,264 [wrapper] ==== pilot stdout END ====
[2026-03-04 11:51:44] 2026-03-04 10:51:44,267 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 11:51:44] 2026-03-04 10:51:44,270 [wrapper] pilotpid: 1662619
[2026-03-04 11:51:44] 2026-03-04 10:51:44,273 [wrapper] Pilot exit status: 0
[2026-03-04 11:51:44] 2026-03-04 10:51:44,284 [wrapper] pandaids: 7036254842
[2026-03-04 11:51:44] 2026-03-04 10:51:44,344 [wrapper] cleanup supervisor_pilot 1868762 1662620
[2026-03-04 11:51:44] 2026-03-04 10:51:44,347 [wrapper] Test setup, not cleaning
[2026-03-04 11:51:44] 2026-03-04 10:51:44,350 [wrapper] apfmon messages muted
[2026-03-04 11:51:44] 2026-03-04 10:51:44,353 [wrapper] ==== wrapper stdout END ====
[2026-03-04 11:51:44] 2026-03-04 10:51:44,356 [wrapper] ==== wrapper stderr END ====
[2026-03-04 11:51:44]  *** Error codes and diagnostics ***
[2026-03-04 11:51:44]     "exeErrorCode": 0,
[2026-03-04 11:51:44]     "exeErrorDiag": "",
[2026-03-04 11:51:44]     "pilotErrorCode": 0,
[2026-03-04 11:51:44]     "pilotErrorDiag": "",
[2026-03-04 11:51:44]  *** Listing of results directory ***
[2026-03-04 11:51:44] total 497328
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc    602657 Feb  3 12:11 pilot3.tar.gz
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc      5111 Mar  3 10:03 queuedata.json
[2026-03-04 11:51:44] -rwx------ 1 boinc boinc     36322 Mar  3 10:04 runpilot2-wrapper.sh
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc       100 Mar  4 08:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 11:51:44] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 08:51 run_atlas
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc       105 Mar  4 08:51 job.xml
[2026-03-04 11:51:44] -rw-r--r-- 2 boinc boinc 286182015 Mar  4 08:51 EVNT.48343768._000106.pool.root.1
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc      6639 Mar  4 08:51 init_data.xml
[2026-03-04 11:51:44] -rw-r--r-- 2 boinc boinc     15845 Mar  4 08:51 start_atlas.sh
[2026-03-04 11:51:44] drwxrwx--x 2 boinc boinc      4096 Mar  4 08:51 shared
[2026-03-04 11:51:44] -rw-r--r-- 2 boinc boinc    616307 Mar  4 08:51 input.tar.gz
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc         0 Mar  4 08:51 boinc_lockfile
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc      2564 Mar  4 08:51 pandaJob.out
[2026-03-04 11:51:44] -rw------- 1 boinc boinc    997360 Mar  4 08:51 agis_schedconf.cvmfs.json
[2026-03-04 11:51:44] -rw------- 1 boinc boinc   1516092 Mar  4 08:51 agis_ddmendpoints.agis.ALL.json
[2026-03-04 11:51:44] -rw------- 1 boinc boinc       446 Mar  4 08:51 workernode_map.json
[2026-03-04 11:51:44] drwx------ 7 boinc boinc      4096 Mar  4 08:51 pilot3
[2026-03-04 11:51:44] -rw------- 1 boinc boinc 215337574 Mar  4 11:49 HITS.48838605._002759.pool.root.1
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc       530 Mar  4 11:50 boinc_task_state.xml
[2026-03-04 11:51:44] -rw------- 1 boinc boinc      1032 Mar  4 11:50 memory_monitor_summary.json
[2026-03-04 11:51:44] -rw------- 1 boinc boinc    350876 Mar  4 11:50 log.48838605._002759.job.log.tgz.1
[2026-03-04 11:51:44] -rw------- 1 boinc boinc      6395 Mar  4 11:50 heartbeat.json
[2026-03-04 11:51:44] -rw------- 1 boinc boinc        95 Mar  4 11:51 pilot_heartbeat.json
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc        28 Mar  4 11:51 wrapper_checkpoint.txt
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc      8192 Mar  4 11:51 boinc_mmap_file
[2026-03-04 11:51:44] -rw------- 1 boinc boinc      5088 Mar  4 11:51 pilotlog.txt
[2026-03-04 11:51:44] -rw------- 1 boinc boinc   1534447 Mar  4 11:51 log.48838605._002759.job.log.1
[2026-03-04 11:51:44] -rw------- 1 boinc boinc       357 Mar  4 11:51 output.list
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc       620 Mar  4 11:51 runtime_log
[2026-03-04 11:51:44] -rw------- 1 boinc boinc   1904640 Mar  4 11:51 result.tar.gz
[2026-03-04 11:51:44] -rw------- 1 boinc boinc       664 Mar  4 11:51 uc9LDmMraH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrKGLDmVcnbLn.diag
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc      9205 Mar  4 11:51 runtime_log.err
[2026-03-04 11:51:44] -rw-r--r-- 1 boinc boinc     21065 Mar  4 11:51 stderr.txt
[2026-03-04 11:51:44] HITS file was successfully produced:
[2026-03-04 11:51:44] -rw------- 1 boinc boinc 215337574 Mar  4 11:49 shared/HITS.pool.root.1
[2026-03-04 11:51:44]  *** Contents of shared directory: ***
[2026-03-04 11:51:44] total 492256
[2026-03-04 11:51:44] -rw-r--r-- 2 boinc boinc 286182015 Mar  4 08:51 ATLAS.root_0
[2026-03-04 11:51:44] -rw-r--r-- 2 boinc boinc     15845 Mar  4 08:51 start_atlas.sh
[2026-03-04 11:51:44] -rw-r--r-- 2 boinc boinc    616307 Mar  4 08:51 input.tar.gz
[2026-03-04 11:51:44] -rw------- 1 boinc boinc 215337574 Mar  4 11:49 HITS.pool.root.1
[2026-03-04 11:51:44] -rw------- 1 boinc boinc   1904640 Mar  4 11:51 result.tar.gz
11:51:46 (1658651): run_atlas exited; CPU time 41560.919144
11:51:46 (1658651): called boinc_finish(0)

</stderr_txt>
]]>

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