Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:42:16 (1725924): wrapper (7.7.26015): starting
10:42:16 (1725924): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 10:42:16] Arguments: --nthreads 4
[2026-03-04 10:42:16] Threads: 4
[2026-03-04 10:42:16] Checking for CVMFS
[2026-03-04 10:42:16] No cvmfs_config command found, will try listing directly
[2026-03-04 10:42:16] CVMFS is ok
[2026-03-04 10:42:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 10:42:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 10:42:16] Further information can be found at the LHC@home message board.
[2026-03-04 10:42:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 10:42:16] Checking for apptainer binary...
[2026-03-04 10:42:16] which: no apptainer in ((null))
[2026-03-04 10:42:16] apptainer is not installed, using version from CVMFS
[2026-03-04 10:42:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 10:42:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-04 10:42:16] apptainer works
[2026-03-04 10:42:16] Set ATHENA_PROC_NUMBER=4
[2026-03-04 10:42:16] Set ATHENA_CORE_NUMBER=4
[2026-03-04 10:42:16] Starting ATLAS job with PandaID=7036262438
[2026-03-04 10:42:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 12:59:55]  *** The last 200 lines of the pilot log: ***
[2026-03-04 12:59:55] 2026-03-04 11:59:03,444 | INFO     | reading metadata from: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036262438/jobReport.json
[2026-03-04 12:59:55] 2026-03-04 11:59:03,447 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot88/slots/0/workernode_map.json
[2026-03-04 12:59:55] 2026-03-04 11:59:03,447 | INFO     | this job has now completed (state=finished)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,447 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,448 | INFO     | log transfer has been attempted: DONE
[2026-03-04 12:59:55] 2026-03-04 11:59:03,448 | INFO     | job 7036262438 has finished - writing final server update
[2026-03-04 12:59:55] 2026-03-04 11:59:03,448 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2345660/.job.ad'
[2026-03-04 12:59:55] 2026-03-04 11:59:03,448 | INFO     | total number of processed events: 400 (read)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,469 | INFO     | monitor loop #583: job 0:7036262438 is in state 'finished'
[2026-03-04 12:59:55] 2026-03-04 11:59:03,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,471 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7036262438/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,472 | INFO     | extracted standard info from prmon json
[2026-03-04 12:59:55] 2026-03-04 11:59:03,472 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 12:59:55] 2026-03-04 11:59:03,472 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 12:59:55] 2026-03-04 11:59:03,472 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 12:59:55] 2026-03-04 11:59:03,472 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 12:59:55] 2026-03-04 11:59:03,475 | INFO     | fitting pss+swap vs Time
[2026-03-04 12:59:55] 2026-03-04 11:59:03,475 | INFO     | sum of square deviations: 746051197.5
[2026-03-04 12:59:55] 2026-03-04 11:59:03,476 | INFO     | sum of deviations: 10642927847.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,476 | INFO     | mean x: 1772621439.5
[2026-03-04 12:59:55] 2026-03-04 11:59:03,476 | INFO     | mean y: 2323343.432835821
[2026-03-04 12:59:55] 2026-03-04 11:59:03,476 | INFO     | intersect: -25285327348.453865
[2026-03-04 12:59:55] 2026-03-04 11:59:03,476 | INFO     | chi2: 1.2986750428634994
[2026-03-04 12:59:55] 2026-03-04 11:59:03,477 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,477 | INFO     | sum of deviations: 10303972380.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,477 | INFO     | mean x: 1772621287.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,477 | INFO     | mean y: 2322700.612403101
[2026-03-04 12:59:55] 2026-03-04 11:59:03,477 | INFO     | intersect: -27438630301.72321
[2026-03-04 12:59:55] 2026-03-04 11:59:03,478 | INFO     | chi2: 1.3004037953836347
[2026-03-04 12:59:55] 2026-03-04 11:59:03,478 | INFO     | current chi2=1.3004037953836347 (change=-0.13311663526877934 %)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,478 | INFO     | right removable region: 128
[2026-03-04 12:59:55] 2026-03-04 11:59:03,478 | INFO     | sum of square deviations: 665612480.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,479 | INFO     | sum of deviations: -4940535973.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,479 | INFO     | mean x: 1772621592.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,479 | INFO     | mean y: 2352238.689922481
[2026-03-04 12:59:55] 2026-03-04 11:59:03,479 | INFO     | intersect: 13159708816.18758
[2026-03-04 12:59:55] 2026-03-04 11:59:03,479 | INFO     | chi2: 0.0075141047031197635
[2026-03-04 12:59:55] 2026-03-04 11:59:03,479 | INFO     | current chi2=0.0075141047031197635 (change=99.42140224035171 %)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,479 | INFO     | sum of square deviations: 591173875.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,480 | INFO     | sum of deviations: -4095377252.0000005
[2026-03-04 12:59:55] 2026-03-04 11:59:03,480 | INFO     | mean x: 1772621744.5
[2026-03-04 12:59:55] 2026-03-04 11:59:03,480 | INFO     | mean y: 2350497.64516129
[2026-03-04 12:59:55] 2026-03-04 11:59:03,480 | INFO     | intersect: 12282248300.682983
[2026-03-04 12:59:55] 2026-03-04 11:59:03,480 | INFO     | chi2: 0.0071735533618553955
[2026-03-04 12:59:55] 2026-03-04 11:59:03,481 | INFO     | current chi2=0.0071735533618553955 (change=4.532161245011336 %)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,481 | INFO     | left removable region: 20
[2026-03-04 12:59:55] 2026-03-04 11:59:03,481 | INFO     | sum of square deviations: 390582207.0
[2026-03-04 12:59:55] 2026-03-04 11:59:03,481 | INFO     | sum of deviations: -1643051683.5
[2026-03-04 12:59:55] 2026-03-04 11:59:03,481 | INFO     | mean x: 1772621866.5
[2026-03-04 12:59:55] 2026-03-04 11:59:03,482 | INFO     | mean y: 2345368.342592593
[2026-03-04 12:59:55] 2026-03-04 11:59:03,482 | INFO     | intersect: 7459186181.272243
[2026-03-04 12:59:55] 2026-03-04 11:59:03,482 | INFO     | chi2: 0.0033944470387179196
[2026-03-04 12:59:55] 2026-03-04 11:59:03,482 | INFO     | current memory leak: -4.21 B/s (using 108 data points, chi2=0.00)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,482 | INFO     | could have reported an average CPU frequency of 2767 MHz (8 samples)
[2026-03-04 12:59:55] 2026-03-04 11:59:03,482 | INFO     | ..............................
[2026-03-04 12:59:55] 2026-03-04 11:59:03,482 | INFO     | . Timing measurements:
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | . get job = 0 s
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | . initial setup = 7 s
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | . payload setup = 8 s
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | . stage-in = 0 s
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | . payload execution = 8158 s
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | . stage-out = 0 s
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | . log creation = 0 s
[2026-03-04 12:59:55] 2026-03-04 11:59:03,483 | INFO     | ..............................
[2026-03-04 12:59:55] 2026-03-04 11:59:04,003 | INFO     | 
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | job summary report
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | --------------------------------------------------
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | PanDA job id: 7036262438
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | task id: 48878057
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | errors: (none)
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | pilot state: finished 
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | transexitcode: 0
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | exeerrorcode: 0
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | exeerrordiag: 
[2026-03-04 12:59:55] 2026-03-04 11:59:04,004 | INFO     | exitcode: 0
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | exitmsg: OK
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | cpuconsumptiontime: 31353 s
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | nevents: 400
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | neventsw: 0
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | pid: 1735256
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | pgrp: 1735256
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | corecount: 4
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | event service: False
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | sizes: {0: 2286627, 1: 2287144, 12: 2287144, 8169: 2314858, 8170: 2314857, 8171: 2323933, 8173: 2324117, 8174: 2324311}
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | --------------------------------------------------
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | 
[2026-03-04 12:59:55] 2026-03-04 11:59:04,005 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-03-04 12:59:55] 2026-03-04 11:59:04,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,037 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 12:59:55] 2026-03-04 11:59:04,038 | INFO     | job 7036262438 has completed (purged errors)
[2026-03-04 12:59:55] 2026-03-04 11:59:04,038 | INFO     | overall cleanup function is called
[2026-03-04 12:59:55] 2026-03-04 11:59:05,047 | INFO     | --- collectZombieJob: --- 10, [1735256]
[2026-03-04 12:59:55] 2026-03-04 11:59:05,048 | INFO     | zombie collector waiting for pid 1735256
[2026-03-04 12:59:55] 2026-03-04 11:59:05,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 12:59:55] 2026-03-04 11:59:05,048 | INFO     | collected zombie processes
[2026-03-04 12:59:55] 2026-03-04 11:59:05,048 | INFO     | will attempt to kill all subprocesses of pid=1735256
[2026-03-04 12:59:55] 2026-03-04 11:59:05,632 | INFO     | process IDs to be killed: [1735256] (in reverse order)
[2026-03-04 12:59:55] 2026-03-04 11:59:05,854 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 12:59:55] 2026-03-04 11:59:05,854 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 12:59:55] 2026-03-04 11:59:05,874 | INFO     | did not find any defunct processes belonging to 1735256
[2026-03-04 12:59:55] 2026-03-04 11:59:05,891 | INFO     | did not find any defunct processes belonging to 1735256
[2026-03-04 12:59:55] 2026-03-04 11:59:05,892 | INFO     | ready for new job
[2026-03-04 12:59:55] 2026-03-04 11:59:05,892 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 12:59:55] 2026-03-04 11:59:05,894 | INFO     | **************************************
[2026-03-04 12:59:55] 2026-03-04 11:59:05,894 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 12:59:55] 2026-03-04 11:59:05,894 | INFO     | **************************************
[2026-03-04 12:59:55] 2026-03-04 11:59:05,894 | INFO     | 
[2026-03-04 12:59:55] 2026-03-04 11:59:05,902 | INFO     | architecture information:
[2026-03-04 12:59:55] 2026-03-04 11:59:05,903 | INFO     | executing command: cat /etc/os-release
[2026-03-04 12:59:55] 2026-03-04 11:59:05,928 | INFO     | cat /etc/os-release:
[2026-03-04 12:59:55] NAME="CentOS Linux"
[2026-03-04 12:59:55] VERSION="7 (Core)"
[2026-03-04 12:59:55] ID="centos"
[2026-03-04 12:59:55] ID_LIKE="rhel fedora"
[2026-03-04 12:59:55] VERSION_ID="7"
[2026-03-04 12:59:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 12:59:55] ANSI_COLOR="0;31"
[2026-03-04 12:59:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 12:59:55] HOME_URL="https://www.centos.org/"
[2026-03-04 12:59:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 12:59:55] 
[2026-03-04 12:59:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 12:59:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 12:59:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 12:59:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 12:59:55] 
[2026-03-04 12:59:55] 2026-03-04 11:59:05,928 | INFO     | **************************************
[2026-03-04 12:59:55] 2026-03-04 11:59:06,431 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-03-04 12:59:55] 2026-03-04 11:59:06,458 | INFO     | sufficient remaining disk space (3312761962496 B)
[2026-03-04 12:59:55] 2026-03-04 11:59:06,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 12:59:55] 2026-03-04 11:59:06,459 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 12:59:55] 2026-03-04 11:59:06,459 | INFO     | update_server=False
[2026-03-04 12:59:55] 2026-03-04 11:59:06,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 12:59:55] 2026-03-04 11:59:06,973 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:59:55] 2026-03-04 11:59:06,973 | INFO     | aborting loop
[2026-03-04 12:59:55] 2026-03-04 11:59:07,283 | INFO     | all data control threads have been joined
[2026-03-04 12:59:55] 2026-03-04 11:59:07,465 | INFO     | [job] retrieve thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:07,486 | INFO     | all job control threads have been joined
[2026-03-04 12:59:55] 2026-03-04 11:59:07,887 | INFO     | all payload control threads have been joined
[2026-03-04 12:59:55] 2026-03-04 11:59:07,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 12:59:55] 2026-03-04 11:59:07,967 | INFO     | [payload] validate_post thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:07,974 | INFO     | [job] job monitor thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,287 | INFO     | [job] validate thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,288 | INFO     | [data] control thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,345 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 12:59:55] 2026-03-04 11:59:08,379 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,491 | INFO     | [job] control thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,570 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 12:59:55] 2026-03-04 11:59:08,727 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,848 | INFO     | [data] copytool_in thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:08,893 | INFO     | [payload] control thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:09,047 | INFO     | [payload] failed_post thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:09,585 | INFO     | [job] queue monitor thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:09,907 | INFO     | [data] copytool_out thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:12,351 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:16,560 | INFO     | job.realtimelogging is not enabled
[2026-03-04 12:59:55] 2026-03-04 11:59:17,566 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 12:59:55] 2026-03-04 11:59:37,203 | INFO     | PID=1730236 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 12:59:55] 2026-03-04 11:59:37,204 | INFO     | .. there are 19 such processes running
[2026-03-04 12:59:55] 2026-03-04 11:59:37,205 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 12:59:55] 2026-03-04 11:59:37,205 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 12:59:55] 2026-03-04 11:59:37,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 12:59:55] 2026-03-04 11:59:48,934 | INFO     | [monitor] cgroup control has ended
[2026-03-04 12:59:55] 2026-03-04 11:59:50,173 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23116173424448)>', '<ExcThread(monitor, started 23115934742272)>']
[2026-03-04 12:59:55] 2026-03-04 11:59:50,270 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 12:59:55] 2026-03-04 11:59:50,270 | INFO     | [monitor] control thread has ended
[2026-03-04 12:59:55] 2026-03-04 11:59:55,199 | INFO     | all workflow threads have been joined
[2026-03-04 12:59:55] 2026-03-04 11:59:55,200 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 12:59:55] 2026-03-04 11:59:55,200 | INFO     | traces error code: 0
[2026-03-04 12:59:55] 2026-03-04 11:59:55,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 12:59:55] 2026-03-04 11:59:55,378 [wrapper] ==== pilot stdout END ====
[2026-03-04 12:59:55] 2026-03-04 11:59:55,382 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 12:59:55] 2026-03-04 11:59:55,386 [wrapper] pilotpid: 1730236
[2026-03-04 12:59:55] 2026-03-04 11:59:55,390 [wrapper] Pilot exit status: 0
[2026-03-04 12:59:55] 2026-03-04 11:59:55,405 [wrapper] pandaids: 7036262438
[2026-03-04 12:59:55] 2026-03-04 11:59:55,546 [wrapper] cleanup supervisor_pilot 1980463 1730237
[2026-03-04 12:59:55] 2026-03-04 11:59:55,550 [wrapper] Test setup, not cleaning
[2026-03-04 12:59:55] 2026-03-04 11:59:55,554 [wrapper] apfmon messages muted
[2026-03-04 12:59:55] 2026-03-04 11:59:55,558 [wrapper] ==== wrapper stdout END ====
[2026-03-04 12:59:55] 2026-03-04 11:59:55,562 [wrapper] ==== wrapper stderr END ====
[2026-03-04 12:59:55]  *** Error codes and diagnostics ***
[2026-03-04 12:59:55]     "exeErrorCode": 0,
[2026-03-04 12:59:55]     "exeErrorDiag": "",
[2026-03-04 12:59:55]     "pilotErrorCode": 0,
[2026-03-04 12:59:55]     "pilotErrorDiag": "",
[2026-03-04 12:59:55]  *** Listing of results directory ***
[2026-03-04 12:59:55] total 504112
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-04 12:59:55] -rwx------ 1 boinc boinc     36322 Mar  3 10:02 runpilot2-wrapper.sh
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc      5111 Mar  3 10:03 queuedata.json
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc       100 Mar  4 10:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 12:59:55] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 10:42 run_atlas
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc       105 Mar  4 10:42 job.xml
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc      6699 Mar  4 10:42 init_data.xml
[2026-03-04 12:59:55] -rw-r--r-- 2 boinc boinc 294311779 Mar  4 10:42 EVNT.48717157._000019.pool.root.1
[2026-03-04 12:59:55] -rw-r--r-- 2 boinc boinc     15845 Mar  4 10:42 start_atlas.sh
[2026-03-04 12:59:55] drwxrwx--x 2 boinc boinc      4096 Mar  4 10:42 shared
[2026-03-04 12:59:55] -rw-r--r-- 2 boinc boinc    597947 Mar  4 10:42 input.tar.gz
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc         0 Mar  4 10:42 boinc_lockfile
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc      2593 Mar  4 10:42 pandaJob.out
[2026-03-04 12:59:55] -rw------- 1 boinc boinc    997376 Mar  4 10:42 agis_schedconf.cvmfs.json
[2026-03-04 12:59:55] -rw------- 1 boinc boinc   1516092 Mar  4 10:42 agis_ddmendpoints.agis.ALL.json
[2026-03-04 12:59:55] -rw------- 1 boinc boinc       442 Mar  4 10:42 workernode_map.json
[2026-03-04 12:59:55] drwx------ 5 boinc boinc      4096 Mar  4 10:42 pilot3
[2026-03-04 12:59:55] -rw------- 1 boinc boinc 214993188 Mar  4 12:58 HITS.48878057._000475.pool.root.1
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc       529 Mar  4 12:58 boinc_task_state.xml
[2026-03-04 12:59:55] -rw------- 1 boinc boinc      1023 Mar  4 12:58 memory_monitor_summary.json
[2026-03-04 12:59:55] -rw------- 1 boinc boinc    332996 Mar  4 12:58 log.48878057._000475.job.log.tgz.1
[2026-03-04 12:59:55] -rw------- 1 boinc boinc      6340 Mar  4 12:59 heartbeat.json
[2026-03-04 12:59:55] -rw------- 1 boinc boinc        95 Mar  4 12:59 pilot_heartbeat.json
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc      8192 Mar  4 12:59 boinc_mmap_file
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc        27 Mar  4 12:59 wrapper_checkpoint.txt
[2026-03-04 12:59:55] -rw------- 1 boinc boinc      4903 Mar  4 12:59 pilotlog.txt
[2026-03-04 12:59:55] -rw------- 1 boinc boinc   1152179 Mar  4 12:59 log.48878057._000475.job.log.1
[2026-03-04 12:59:55] -rw------- 1 boinc boinc       357 Mar  4 12:59 output.list
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc       620 Mar  4 12:59 runtime_log
[2026-03-04 12:59:55] -rw------- 1 boinc boinc   1505280 Mar  4 12:59 result.tar.gz
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc      9204 Mar  4 12:59 runtime_log.err
[2026-03-04 12:59:55] -rw------- 1 boinc boinc       662 Mar  4 12:59 LZFLDmPpaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPAELDmETouNm.diag
[2026-03-04 12:59:55] -rw-r--r-- 1 boinc boinc     21145 Mar  4 12:59 stderr.txt
[2026-03-04 12:59:55] HITS file was successfully produced:
[2026-03-04 12:59:55] -rw------- 1 boinc boinc 214993188 Mar  4 12:58 shared/HITS.pool.root.1
[2026-03-04 12:59:55]  *** Contents of shared directory: ***
[2026-03-04 12:59:55] total 499448
[2026-03-04 12:59:55] -rw-r--r-- 2 boinc boinc 294311779 Mar  4 10:42 ATLAS.root_0
[2026-03-04 12:59:55] -rw-r--r-- 2 boinc boinc     15845 Mar  4 10:42 start_atlas.sh
[2026-03-04 12:59:55] -rw-r--r-- 2 boinc boinc    597947 Mar  4 10:42 input.tar.gz
[2026-03-04 12:59:55] -rw------- 1 boinc boinc 214993188 Mar  4 12:58 HITS.pool.root.1
[2026-03-04 12:59:55] -rw------- 1 boinc boinc   1505280 Mar  4 12:59 result.tar.gz
12:59:57 (1725924): run_atlas exited; CPU time 31736.973802
12:59:57 (1725924): called boinc_finish(0)

</stderr_txt>
]]>

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