Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
16:44:45 (395318): wrapper (7.7.26015): starting
16:44:45 (395318): wrapper: running run_atlas (--nthreads 4)
[2026-03-03 16:44:45] Arguments: --nthreads 4
[2026-03-03 16:44:45] Threads: 4
[2026-03-03 16:44:45] Checking for CVMFS
[2026-03-03 16:44:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 16:44:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 16:44:45] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 16:44:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 16:44:45] 2.13.2.0 3485 521 60184 156847 1 188 2552595 4096000 6556 130560 0 1212915 99.996 15262 501 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-03 16:44:45] CVMFS is ok
[2026-03-03 16:44:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 16:44:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 16:44:45] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-03 16:44:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-03 16:44:45] Further information can be found at the LHC@home message board.
[2026-03-03 16:44:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 16:44:45] Checking for apptainer binary...
[2026-03-03 16:44:45] apptainer is not installed, using version from CVMFS
[2026-03-03 16:44:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 16:44:46] ng-jupiter
[2026-03-03 16:44:46] apptainer works
[2026-03-03 16:44:46] Set ATHENA_PROC_NUMBER=4
[2026-03-03 16:44:46] Set ATHENA_CORE_NUMBER=4
[2026-03-03 16:44:46] Starting ATLAS job with PandaID=7036254472
[2026-03-03 16:44:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 18:54:18]  *** The last 200 lines of the pilot log: ***
[2026-03-03 18:54:18] 2026-03-03 16:53:33,441 | INFO     | preparing for final server update for job 7036254472 in state='finished'
[2026-03-03 18:54:18] 2026-03-03 16:53:33,909 | INFO     | time since job start (7712s) is within the limit (349056.0s)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,192 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,193 | INFO     | reading metadata from: /var/lib/boinc-client/slots/6/PanDA_Pilot-7036254472/jobReport.json
[2026-03-03 18:54:18] 2026-03-03 16:53:34,196 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/6/workernode_map.json
[2026-03-03 18:54:18] 2026-03-03 16:53:34,196 | INFO     | this job has now completed (state=finished)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,196 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,197 | INFO     | log transfer has been attempted: DONE
[2026-03-03 18:54:18] 2026-03-03 16:53:34,197 | INFO     | job 7036254472 has finished - writing final server update
[2026-03-03 18:54:18] 2026-03-03 16:53:34,197 | INFO     | total number of processed events: 400 (read)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,212 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-7036254472/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,213 | INFO     | extracted standard info from prmon json
[2026-03-03 18:54:18] 2026-03-03 16:53:34,213 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 18:54:18] 2026-03-03 16:53:34,213 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 18:54:18] 2026-03-03 16:53:34,213 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 18:54:18] 2026-03-03 16:53:34,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 18:54:18] 2026-03-03 16:53:34,216 | INFO     | fitting pss+swap vs Time
[2026-03-03 18:54:18] 2026-03-03 16:53:34,217 | INFO     | sum of square deviations: 620244187.5
[2026-03-03 18:54:18] 2026-03-03 16:53:34,218 | INFO     | sum of deviations: 14532204338.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,218 | INFO     | mean x: 1772552936.5
[2026-03-03 18:54:18] 2026-03-03 16:53:34,218 | INFO     | mean y: 2000005.253968254
[2026-03-03 18:54:18] 2026-03-03 16:53:34,218 | INFO     | intersect: -41528581001.82711
[2026-03-03 18:54:18] 2026-03-03 16:53:34,218 | INFO     | chi2: 1.5490763023149363
[2026-03-03 18:54:18] 2026-03-03 16:53:34,219 | INFO     | sum of square deviations: 549294020.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,220 | INFO     | sum of deviations: 17360469216.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,220 | INFO     | mean x: 1772552784.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,220 | INFO     | mean y: 2006072.570247934
[2026-03-03 18:54:18] 2026-03-03 16:53:34,220 | INFO     | intersect: -56019627005.407
[2026-03-03 18:54:18] 2026-03-03 16:53:34,220 | INFO     | chi2: 1.498641996328981
[2026-03-03 18:54:18] 2026-03-03 16:53:34,221 | INFO     | current chi2=1.498641996328981 (change=3.2557664145133725 %)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,221 | INFO     | right removable region: 120
[2026-03-03 18:54:18] 2026-03-03 16:53:34,221 | INFO     | sum of square deviations: 549294020.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,222 | INFO     | sum of deviations: -1190767762.9999995
[2026-03-03 18:54:18] 2026-03-03 16:53:34,222 | INFO     | mean x: 1772553089.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,222 | INFO     | mean y: 2033202.2479338844
[2026-03-03 18:54:18] 2026-03-03 16:53:34,222 | INFO     | intersect: 3844600205.9580216
[2026-03-03 18:54:18] 2026-03-03 16:53:34,222 | INFO     | chi2: 0.06926060130292191
[2026-03-03 18:54:18] 2026-03-03 16:53:34,223 | INFO     | current chi2=0.06926060130292191 (change=95.52890963476626 %)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,223 | INFO     | sum of square deviations: 483971865.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,224 | INFO     | sum of deviations: -782610602.0000005
[2026-03-03 18:54:18] 2026-03-03 16:53:34,224 | INFO     | mean x: 1772553241.5
[2026-03-03 18:54:18] 2026-03-03 16:53:34,224 | INFO     | mean y: 2032225.6551724137
[2026-03-03 18:54:18] 2026-03-03 16:53:34,224 | INFO     | intersect: 2868353720.2060328
[2026-03-03 18:54:18] 2026-03-03 16:53:34,224 | INFO     | chi2: 0.06555270925902916
[2026-03-03 18:54:18] 2026-03-03 16:53:34,224 | INFO     | current chi2=0.06555270925902916 (change=5.3535371829587755 %)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,225 | INFO     | left removable region: 20
[2026-03-03 18:54:18] 2026-03-03 16:53:34,225 | INFO     | sum of square deviations: 310052325.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,225 | INFO     | sum of deviations: 2256411594.0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,226 | INFO     | mean x: 1772553363.5
[2026-03-03 18:54:18] 2026-03-03 16:53:34,226 | INFO     | mean y: 2040856.06
[2026-03-03 18:54:18] 2026-03-03 16:53:34,226 | INFO     | intersect: -12897749398.327213
[2026-03-03 18:54:18] 2026-03-03 16:53:34,226 | INFO     | chi2: 0.01286379644835819
[2026-03-03 18:54:18] 2026-03-03 16:53:34,226 | INFO     | current memory leak: 7.28 B/s (using 100 data points, chi2=0.01)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,227 | INFO     | could have reported an average CPU frequency of 2183 MHz (8 samples)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,227 | INFO     | ..............................
[2026-03-03 18:54:18] 2026-03-03 16:53:34,227 | INFO     | . Timing measurements:
[2026-03-03 18:54:18] 2026-03-03 16:53:34,227 | INFO     | . get job = 0 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,227 | INFO     | . initial setup = 6 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,228 | INFO     | . payload setup = 6 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,228 | INFO     | . stage-in = 0 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,228 | INFO     | . payload execution = 7686 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,228 | INFO     | . stage-out = 1 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,228 | INFO     | . log creation = 0 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,228 | INFO     | ..............................
[2026-03-03 18:54:18] 2026-03-03 16:53:34,313 | INFO     | 
[2026-03-03 18:54:18] 2026-03-03 16:53:34,313 | INFO     | job summary report
[2026-03-03 18:54:18] 2026-03-03 16:53:34,313 | INFO     | --------------------------------------------------
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | PanDA job id: 7036254472
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | task id: 48838605
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | errors: (none)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | pilot state: finished 
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | transexitcode: 0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | exeerrorcode: 0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,314 | INFO     | exeerrordiag: 
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | exitcode: 0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | exitmsg: OK
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | cpuconsumptiontime: 29616 s
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | nevents: 400
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | neventsw: 0
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | pid: 404201
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | pgrp: 404201
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | corecount: 4
[2026-03-03 18:54:18] 2026-03-03 16:53:34,315 | INFO     | event service: False
[2026-03-03 18:54:18] 2026-03-03 16:53:34,316 | INFO     | sizes: {0: 2287030, 11: 2287030, 7696: 2314698, 7697: 2323710, 7699: 2323766, 7702: 2323960}
[2026-03-03 18:54:18] 2026-03-03 16:53:34,316 | INFO     | --------------------------------------------------
[2026-03-03 18:54:18] 2026-03-03 16:53:34,316 | INFO     | 
[2026-03-03 18:54:18] 2026-03-03 16:53:34,316 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2026-03-03 18:54:18] 2026-03-03 16:53:34,333 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,333 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,333 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,334 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,335 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,336 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 18:54:18] 2026-03-03 16:53:34,336 | INFO     | job 7036254472 has completed (purged errors)
[2026-03-03 18:54:18] 2026-03-03 16:53:34,336 | INFO     | overall cleanup function is called
[2026-03-03 18:54:18] 2026-03-03 16:53:35,344 | INFO     | --- collectZombieJob: --- 10, [404201]
[2026-03-03 18:54:18] 2026-03-03 16:53:35,344 | INFO     | zombie collector waiting for pid 404201
[2026-03-03 18:54:18] 2026-03-03 16:53:35,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 18:54:18] 2026-03-03 16:53:35,345 | INFO     | collected zombie processes
[2026-03-03 18:54:18] 2026-03-03 16:53:35,345 | INFO     | will attempt to kill all subprocesses of pid=404201
[2026-03-03 18:54:18] 2026-03-03 16:53:35,594 | INFO     | process IDs to be killed: [404201] (in reverse order)
[2026-03-03 18:54:18] 2026-03-03 16:53:35,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 18:54:18] 2026-03-03 16:53:35,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 18:54:18] 2026-03-03 16:53:35,667 | INFO     | did not find any defunct processes belonging to 404201
[2026-03-03 18:54:18] 2026-03-03 16:53:35,671 | INFO     | did not find any defunct processes belonging to 404201
[2026-03-03 18:54:18] 2026-03-03 16:53:35,671 | INFO     | ready for new job
[2026-03-03 18:54:18] 2026-03-03 16:53:35,672 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 18:54:18] 2026-03-03 16:53:35,675 | INFO     | **************************************
[2026-03-03 18:54:18] 2026-03-03 16:53:35,675 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 18:54:18] 2026-03-03 16:53:35,675 | INFO     | **************************************
[2026-03-03 18:54:18] 2026-03-03 16:53:35,675 | INFO     | 
[2026-03-03 18:54:18] 2026-03-03 16:53:35,678 | INFO     | architecture information:
[2026-03-03 18:54:18] 2026-03-03 16:53:35,678 | INFO     | executing command: cat /etc/os-release
[2026-03-03 18:54:18] 2026-03-03 16:53:35,690 | INFO     | cat /etc/os-release:
[2026-03-03 18:54:18] NAME="CentOS Linux"
[2026-03-03 18:54:18] VERSION="7 (Core)"
[2026-03-03 18:54:18] ID="centos"
[2026-03-03 18:54:18] ID_LIKE="rhel fedora"
[2026-03-03 18:54:18] VERSION_ID="7"
[2026-03-03 18:54:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 18:54:18] ANSI_COLOR="0;31"
[2026-03-03 18:54:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 18:54:18] HOME_URL="https://www.centos.org/"
[2026-03-03 18:54:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 18:54:18] 
[2026-03-03 18:54:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 18:54:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 18:54:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 18:54:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 18:54:18] 
[2026-03-03 18:54:18] 2026-03-03 16:53:35,690 | INFO     | **************************************
[2026-03-03 18:54:18] 2026-03-03 16:53:36,193 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2026-03-03 18:54:18] 2026-03-03 16:53:36,209 | INFO     | sufficient remaining disk space (2953331081216 B)
[2026-03-03 18:54:18] 2026-03-03 16:53:36,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 18:54:18] 2026-03-03 16:53:36,209 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 18:54:18] 2026-03-03 16:53:36,209 | INFO     | update_server=False
[2026-03-03 18:54:18] 2026-03-03 16:53:36,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 18:54:18] 2026-03-03 16:53:36,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 18:54:18] 2026-03-03 16:53:36,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 18:54:18] 2026-03-03 16:53:36,210 | INFO     | aborting loop
[2026-03-03 18:54:18] 2026-03-03 16:53:36,953 | INFO     | all data control threads have been joined
[2026-03-03 18:54:18] 2026-03-03 16:53:37,215 | INFO     | [job] retrieve thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:37,216 | INFO     | [job] queue monitor thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:37,216 | INFO     | [job] job monitor thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:37,381 | INFO     | all payload control threads have been joined
[2026-03-03 18:54:18] 2026-03-03 16:53:37,443 | INFO     | [payload] validate_post thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:37,488 | INFO     | all job control threads have been joined
[2026-03-03 18:54:18] 2026-03-03 16:53:37,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 18:54:18] 2026-03-03 16:53:37,817 | INFO     | [job] validate thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:37,959 | INFO     | [data] control thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:38,091 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:38,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 18:54:18] 2026-03-03 16:53:38,308 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:38,387 | INFO     | [payload] control thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:38,392 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:38,494 | INFO     | [job] control thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:38,536 | INFO     | [payload] failed_post thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:38,555 | INFO     | [data] copytool_in thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:39,513 | INFO     | [data] copytool_out thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:42,217 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:53:46,923 | INFO     | job.realtimelogging is not enabled
[2026-03-03 18:54:18] 2026-03-03 16:53:47,927 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 18:54:18] 2026-03-03 16:54:07,249 | INFO     | PID=399291 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-03 18:54:18] 2026-03-03 16:54:07,249 | INFO     | .. there are 9 such processes running
[2026-03-03 18:54:18] 2026-03-03 16:54:07,249 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 18:54:18] 2026-03-03 16:54:07,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 18:54:18] 2026-03-03 16:54:07,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 18:54:18] 2026-03-03 16:54:12,583 | INFO     | [monitor] cgroup control has ended
[2026-03-03 18:54:18] 2026-03-03 16:54:13,625 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140639337830208)>', '<ExcThread(monitor, started 140638569887488)>']
[2026-03-03 18:54:18] 2026-03-03 16:54:14,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 18:54:18] 2026-03-03 16:54:14,278 | INFO     | [monitor] control thread has ended
[2026-03-03 18:54:18] 2026-03-03 16:54:18,649 | INFO     | all workflow threads have been joined
[2026-03-03 18:54:18] 2026-03-03 16:54:18,649 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 18:54:18] 2026-03-03 16:54:18,649 | INFO     | traces error code: 0
[2026-03-03 18:54:18] 2026-03-03 16:54:18,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 18:54:18] 2026-03-03 16:54:18,758 [wrapper] ==== pilot stdout END ====
[2026-03-03 18:54:18] 2026-03-03 16:54:18,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 18:54:18] 2026-03-03 16:54:18,762 [wrapper] pilotpid: 399291
[2026-03-03 18:54:18] 2026-03-03 16:54:18,764 [wrapper] Pilot exit status: 0
[2026-03-03 18:54:18] 2026-03-03 16:54:18,772 [wrapper] pandaids: 7036254472
[2026-03-03 18:54:18] 2026-03-03 16:54:18,804 [wrapper] cleanup supervisor_pilot  532518 399292
[2026-03-03 18:54:18] 2026-03-03 16:54:18,806 [wrapper] Test setup, not cleaning
[2026-03-03 18:54:18] 2026-03-03 16:54:18,808 [wrapper] apfmon messages muted
[2026-03-03 18:54:18] 2026-03-03 16:54:18,810 [wrapper] ==== wrapper stdout END ====
[2026-03-03 18:54:18] 2026-03-03 16:54:18,811 [wrapper] ==== wrapper stderr END ====
[2026-03-03 18:54:18]  *** Error codes and diagnostics ***
[2026-03-03 18:54:18]     "exeErrorCode": 0,
[2026-03-03 18:54:18]     "exeErrorDiag": "",
[2026-03-03 18:54:18]     "pilotErrorCode": 0,
[2026-03-03 18:54:18]     "pilotErrorDiag": "",
[2026-03-03 18:54:18]  *** Listing of results directory ***
[2026-03-03 18:54:18] total 487712
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc    584627 Mar  3 10:25 pilot3.tar.gz
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc      5111 Mar  3 11:01 queuedata.json
[2026-03-03 18:54:18] -rwx------ 1 boinc boinc     36322 Mar  3 11:01 runpilot2-wrapper.sh
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc       100 Mar  3 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 18:54:18] -rwxr-xr-x 1 boinc boinc      7986 Mar  3 16:44 run_atlas
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc       105 Mar  3 16:44 job.xml
[2026-03-03 18:54:18] -rw-r--r-- 2 boinc boinc     15845 Mar  3 16:44 start_atlas.sh
[2026-03-03 18:54:18] drwxrwx--x 2 boinc boinc      4096 Mar  3 16:44 shared
[2026-03-03 18:54:18] -rw-r--r-- 2 boinc boinc    597956 Mar  3 16:44 input.tar.gz
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc      6600 Mar  3 16:44 init_data.xml
[2026-03-03 18:54:18] -rw-r--r-- 2 boinc boinc 282715579 Mar  3 16:44 EVNT.48343768._000101.pool.root.1
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc         0 Mar  3 16:44 boinc_lockfile
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc      2563 Mar  3 16:44 pandaJob.out
[2026-03-03 18:54:18] -rw------- 1 boinc boinc    998442 Mar  3 16:44 agis_schedconf.cvmfs.json
[2026-03-03 18:54:18] -rw------- 1 boinc boinc   1516104 Mar  3 16:44 agis_ddmendpoints.agis.ALL.json
[2026-03-03 18:54:18] -rw------- 1 boinc boinc       434 Mar  3 16:45 workernode_map.json
[2026-03-03 18:54:18] drwx------ 5 boinc boinc      4096 Mar  3 16:45 pilot3
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc       529 Mar  3 18:52 boinc_task_state.xml
[2026-03-03 18:54:18] -rw------- 1 boinc boinc 209951829 Mar  3 18:53 HITS.48838605._002627.pool.root.1
[2026-03-03 18:54:18] -rw------- 1 boinc boinc        95 Mar  3 18:53 pilot_heartbeat.json
[2026-03-03 18:54:18] -rw------- 1 boinc boinc      1032 Mar  3 18:53 memory_monitor_summary.json
[2026-03-03 18:54:18] -rw------- 1 boinc boinc    299219 Mar  3 18:53 log.48838605._002627.job.log.tgz.1
[2026-03-03 18:54:18] -rw------- 1 boinc boinc      6332 Mar  3 18:53 heartbeat.json
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc      8192 Mar  3 18:54 boinc_mmap_file
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc        27 Mar  3 18:54 wrapper_checkpoint.txt
[2026-03-03 18:54:18] -rw------- 1 boinc boinc      4899 Mar  3 18:54 pilotlog.txt
[2026-03-03 18:54:18] -rw------- 1 boinc boinc   1109008 Mar  3 18:54 log.48838605._002627.job.log.1
[2026-03-03 18:54:18] -rw------- 1 boinc boinc       357 Mar  3 18:54 output.list
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc       620 Mar  3 18:54 runtime_log
[2026-03-03 18:54:18] -rw------- 1 boinc boinc   1423360 Mar  3 18:54 result.tar.gz
[2026-03-03 18:54:18] -rw------- 1 boinc boinc       727 Mar  3 18:54 uMSLDmdoaH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYGGLDme3y8Co.diag
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc      9140 Mar  3 18:54 runtime_log.err
[2026-03-03 18:54:18] -rw-r--r-- 1 boinc boinc     21446 Mar  3 18:54 stderr.txt
[2026-03-03 18:54:18] HITS file was successfully produced:
[2026-03-03 18:54:18] -rw------- 1 boinc boinc 209951829 Mar  3 18:53 shared/HITS.pool.root.1
[2026-03-03 18:54:18]  *** Contents of shared directory: ***
[2026-03-03 18:54:18] total 483124
[2026-03-03 18:54:18] -rw-r--r-- 2 boinc boinc     15845 Mar  3 16:44 start_atlas.sh
[2026-03-03 18:54:18] -rw-r--r-- 2 boinc boinc    597956 Mar  3 16:44 input.tar.gz
[2026-03-03 18:54:18] -rw-r--r-- 2 boinc boinc 282715579 Mar  3 16:44 ATLAS.root_0
[2026-03-03 18:54:18] -rw------- 1 boinc boinc 209951829 Mar  3 18:53 HITS.pool.root.1
[2026-03-03 18:54:18] -rw------- 1 boinc boinc   1423360 Mar  3 18:54 result.tar.gz
18:54:19 (395318): run_atlas exited; CPU time 29901.318811
18:54:19 (395318): called boinc_finish(0)

</stderr_txt>
]]>

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