Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:01:48 (3807695): wrapper (7.7.26015): starting
11:01:48 (3807695): wrapper: running run_atlas (--nthreads 12)
[2026-03-03 11:01:48] Arguments: --nthreads 12
[2026-03-03 11:01:48] Threads: 12
[2026-03-03 11:01:48] Checking for CVMFS
[2026-03-03 11:01:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 11:01:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 11:01:49] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 11:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 11:01:51] 2.11.5.0 3306151 133285 226344 156853 0 420 28833579 45568000 23343 130560 0 785160810 99.816 454900705 21774 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-03 11:01:51] CVMFS is ok
[2026-03-03 11:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 11:01:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 11:01:51] Further information can be found at the LHC@home message board.
[2026-03-03 11:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 11:01:51] Checking for apptainer binary...
[2026-03-03 11:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 11:01:51] Running /usr/bin/apptainer --version
[2026-03-03 11:01:51] apptainer version 1.4.1-1.el9
[2026-03-03 11:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 11:01:53] wns0041.triumf.lcg
[2026-03-03 11:01:53] apptainer works
[2026-03-03 11:01:53] Set ATHENA_PROC_NUMBER=12
[2026-03-03 11:01:53] Set ATHENA_CORE_NUMBER=12
[2026-03-03 11:01:53] Starting ATLAS job with PandaID=7038487334
[2026-03-03 11:01:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 11:08:34]  *** The last 200 lines of the pilot log: ***
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | WARNING  | wrong length of table data, x=[1772564698.0], y=[1574.0] (must be same and length>=4)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | could have reported an average CPU frequency of 1328 MHz (4 samples)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | ..............................
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | . Timing measurements:
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . get job = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . initial setup = 40 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . payload setup = 35 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . stage-in = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . payload execution = 82 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . stage-out = 1 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . log creation = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | ..............................
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 11:08:35] 2026-03-03 19:07:45,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038487334/pilotlog.txt
[2026-03-03 11:08:35] 2026-03-03 19:07:45,428 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-03 11:08:35] - Log from pilotlog.txt -
[2026-03-03 11:08:35] 2026-03-03 19:07:45,287 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038487334/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | INFO     | extracted standard info from prmon json
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | WARNING  | wrong length of table data, x=[1772564698.0], y=[1574.0] (must be same and length>=4)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | could have reported an average CPU frequency of 1328 MHz (4 samples)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | ..............................
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | . Timing measurements:
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . get job = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . initial setup = 40 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . payload setup = 35 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . stage-in = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . payload execution = 82 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . stage-out = 1 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . log creation = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | ..............................
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 11:08:35] 2026-03-03 19:07:45,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038487334/pilotlog.txt
[2026-03-03 11:08:35] 2026-03-03 19:07:45,429 | WARNING  | 
[2026-03-03 11:08:35] [begin log extracts]
[2026-03-03 11:08:35] - Log from pilotlog.txt -
[2026-03-03 11:08:35] 2026-03-03 19:07:45,287 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038487334/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | INFO     | extracted standard info from prmon json
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 11:08:35] 2026-03-03 19:07:45,311 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | WARNING  | wrong length of table data, x=[1772564698.0], y=[1574.0] (must be same and length>=4)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | could have reported an average CPU frequency of 1328 MHz (4 samples)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | ..............................
[2026-03-03 11:08:35] 2026-03-03 19:07:45,312 | INFO     | . Timing measurements:
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . get job = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . initial setup = 40 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . payload setup = 35 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . stage-in = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . payload execution = 82 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . stage-out = 1 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | . log creation = 0 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | ..............................
[2026-03-03 11:08:35] 2026-03-03 19:07:45,313 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-03 11:08:35] 2026-03-03 19:07:45,314 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038487334/pilotlog.txt
[2026-03-03 11:08:35] [end log extracts]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,429 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,430 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-03 11:08:35] 2026-03-03 19:07:45,692 | INFO     | 
[2026-03-03 11:08:35] 2026-03-03 19:07:45,692 | INFO     | job summary report
[2026-03-03 11:08:35] 2026-03-03 19:07:45,692 | INFO     | --------------------------------------------------
[2026-03-03 11:08:35] 2026-03-03 19:07:45,692 | INFO     | PanDA job id: 7038487334
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | task id: 48955006
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-03 11:05:35,395 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | pilot state: failed 
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | transexitcode: 65
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | exeerrorcode: 65
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | exitcode: 65
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | cpuconsumptiontime: 24 s
[2026-03-03 11:08:35] 2026-03-03 19:07:45,693 | INFO     | nevents: 0
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | neventsw: 0
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | pid: 3816412
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | pgrp: 3816412
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | corecount: 12
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | event service: False
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | sizes: {0: 2286565, 1: 2286649, 3: 2287110, 14: 2287110, 123: 2310351, 125: 2314799, 244: 2314937}
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | --------------------------------------------------
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | 
[2026-03-03 11:08:35] 2026-03-03 19:07:45,694 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-03 11:08:35] 2026-03-03 19:07:45,958 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,959 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,960 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 11:08:35] 2026-03-03 19:07:45,961 | INFO     | job 7038487334 has completed (purged errors)
[2026-03-03 11:08:35] 2026-03-03 19:07:45,961 | INFO     | overall cleanup function is called
[2026-03-03 11:08:35] 2026-03-03 19:07:46,981 | INFO     | --- collectZombieJob: --- 10, [3816412]
[2026-03-03 11:08:35] 2026-03-03 19:07:46,981 | INFO     | zombie collector waiting for pid 3816412
[2026-03-03 11:08:35] 2026-03-03 19:07:46,981 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 11:08:35] 2026-03-03 19:07:46,981 | INFO     | collected zombie processes
[2026-03-03 11:08:35] 2026-03-03 19:07:46,982 | INFO     | will attempt to kill all subprocesses of pid=3816412
[2026-03-03 11:08:35] 2026-03-03 19:07:48,225 | INFO     | process IDs to be killed: [3816412] (in reverse order)
[2026-03-03 11:08:35] 2026-03-03 19:07:48,507 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 11:08:35] 2026-03-03 19:07:48,507 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 11:08:35] 2026-03-03 19:07:48,559 | INFO     | did not find any defunct processes belonging to 3816412
[2026-03-03 11:08:35] 2026-03-03 19:07:48,591 | INFO     | did not find any defunct processes belonging to 3816412
[2026-03-03 11:08:35] 2026-03-03 19:07:48,591 | INFO     | ready for new job
[2026-03-03 11:08:35] 2026-03-03 19:07:48,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 11:08:35] 2026-03-03 19:07:48,600 | INFO     | **************************************
[2026-03-03 11:08:35] 2026-03-03 19:07:48,600 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 11:08:35] 2026-03-03 19:07:48,600 | INFO     | **************************************
[2026-03-03 11:08:35] 2026-03-03 19:07:48,600 | INFO     | 
[2026-03-03 11:08:35] 2026-03-03 19:07:48,609 | INFO     | architecture information:
[2026-03-03 11:08:35] 2026-03-03 19:07:48,620 | INFO     | executing command: cat /etc/os-release
[2026-03-03 11:08:35] 2026-03-03 19:07:48,687 | INFO     | cat /etc/os-release:
[2026-03-03 11:08:35] NAME="CentOS Linux"
[2026-03-03 11:08:35] VERSION="7 (Core)"
[2026-03-03 11:08:35] ID="centos"
[2026-03-03 11:08:35] ID_LIKE="rhel fedora"
[2026-03-03 11:08:35] VERSION_ID="7"
[2026-03-03 11:08:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 11:08:35] ANSI_COLOR="0;31"
[2026-03-03 11:08:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 11:08:35] HOME_URL="https://www.centos.org/"
[2026-03-03 11:08:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 11:08:35] 
[2026-03-03 11:08:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 11:08:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 11:08:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 11:08:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 11:08:35] 
[2026-03-03 11:08:35] 2026-03-03 19:07:48,688 | INFO     | **************************************
[2026-03-03 11:08:35] 2026-03-03 19:07:49,191 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-03 11:08:35] 2026-03-03 19:07:49,233 | INFO     | sufficient remaining disk space (1977393086464 B)
[2026-03-03 11:08:35] 2026-03-03 19:07:49,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 11:08:35] 2026-03-03 19:07:49,234 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 11:08:35] 2026-03-03 19:07:49,234 | INFO     | update_server=False
[2026-03-03 11:08:35] 2026-03-03 19:07:49,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 11:08:35] 2026-03-03 19:07:49,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:08:35] 2026-03-03 19:07:49,331 | INFO     | aborting loop
[2026-03-03 11:08:35] 2026-03-03 19:07:49,556 | INFO     | all payload control threads have been joined
[2026-03-03 11:08:35] 2026-03-03 19:07:50,114 | INFO     | all job control threads have been joined
[2026-03-03 11:08:35] 2026-03-03 19:07:50,118 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 11:08:35] 2026-03-03 19:07:50,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 11:08:35] 2026-03-03 19:07:50,242 | INFO     | [job] retrieve thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:50,315 | INFO     | all data control threads have been joined
[2026-03-03 11:08:35] 2026-03-03 19:07:50,332 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:50,337 | INFO     | [job] job monitor thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:50,417 | INFO     | [job] validate thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:50,418 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:50,562 | INFO     | [payload] control thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:50,625 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:50,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 11:08:35] 2026-03-03 19:07:50,797 | INFO     | [data] copytool_in thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:51,120 | INFO     | [job] control thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:51,321 | INFO     | [data] control thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:51,533 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:51,713 | INFO     | [job] queue monitor thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:51,786 | INFO     | [payload] failed_post thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:51,840 | INFO     | [payload] validate_post thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:52,125 | INFO     | [data] copytool_out thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:07:54,205 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 11:08:35] 2026-03-03 19:08:18,991 | INFO     | PID=3811588 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 11:08:35] 2026-03-03 19:08:18,991 | INFO     | .. there are 35 such processes running
[2026-03-03 11:08:35] 2026-03-03 19:08:18,993 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 11:08:35] 2026-03-03 19:08:18,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 11:08:35] 2026-03-03 19:08:18,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 11:08:35] 2026-03-03 19:08:27,409 | INFO     | [monitor] cgroup control has ended
[2026-03-03 11:08:35] 2026-03-03 19:08:29,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140644993869632)>', '<ExcThread(monitor, started 140644458682112)>']
[2026-03-03 11:08:35] 2026-03-03 19:08:30,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 11:08:35] 2026-03-03 19:08:30,075 | INFO     | [monitor] control thread has ended
[2026-03-03 11:08:35] 2026-03-03 19:08:34,182 | INFO     | all workflow threads have been joined
[2026-03-03 11:08:35] 2026-03-03 19:08:34,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 11:08:35] 2026-03-03 19:08:34,183 | INFO     | traces error code: 0
[2026-03-03 11:08:35] 2026-03-03 19:08:34,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 11:08:35] 2026-03-03 19:08:34,338 [wrapper] ==== pilot stdout END ====
[2026-03-03 11:08:35] 2026-03-03 19:08:34,341 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 11:08:35] 2026-03-03 19:08:34,344 [wrapper] pilotpid: 3811588
[2026-03-03 11:08:35] 2026-03-03 19:08:34,347 [wrapper] Pilot exit status: 0
[2026-03-03 11:08:35] 2026-03-03 19:08:34,367 [wrapper] pandaids: 7038487334
[2026-03-03 11:08:35] 2026-03-03 19:08:34,901 [wrapper] cleanup supervisor_pilot 3811594 3811589
[2026-03-03 11:08:35] 2026-03-03 19:08:34,905 [wrapper] Test setup, not cleaning
[2026-03-03 11:08:35] 2026-03-03 19:08:34,908 [wrapper] apfmon messages muted
[2026-03-03 11:08:35] 2026-03-03 19:08:34,911 [wrapper] ==== wrapper stdout END ====
[2026-03-03 11:08:35] 2026-03-03 19:08:34,914 [wrapper] ==== wrapper stderr END ====
[2026-03-03 11:08:35]  *** Error codes and diagnostics ***
[2026-03-03 11:08:35]     "exeErrorCode": 65,
[2026-03-03 11:08:35]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 11:08:35]     "pilotErrorCode": 1305,
[2026-03-03 11:08:35]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-03 11:08:35]  *** Listing of results directory ***
[2026-03-03 11:08:35] total 439240
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc    584627 Mar  3 05:54 pilot3.tar.gz
[2026-03-03 11:08:35] -rwx------. 1 boinc boinc     36322 Mar  3 05:58 runpilot2-wrapper.sh
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc      5111 Mar  3 06:00 queuedata.json
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc       100 Mar  3 11:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 11:08:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar  3 11:01 run_atlas
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc       105 Mar  3 11:01 job.xml
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc      6594 Mar  3 11:01 init_data.xml
[2026-03-03 11:08:35] -rw-r--r--. 2 boinc boinc 445624624 Mar  3 11:01 EVNT.46701403._000007.pool.root.1
[2026-03-03 11:08:35] -rw-r--r--. 2 boinc boinc     15845 Mar  3 11:01 start_atlas.sh
[2026-03-03 11:08:35] drwxrwx--x. 2 boinc boinc      4096 Mar  3 11:01 shared
[2026-03-03 11:08:35] -rw-r--r--. 2 boinc boinc    597939 Mar  3 11:01 input.tar.gz
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc         0 Mar  3 11:01 boinc_lockfile
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc      2559 Mar  3 11:01 pandaJob.out
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc    998492 Mar  3 11:02 agis_schedconf.cvmfs.json
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc   1516092 Mar  3 11:02 agis_ddmendpoints.agis.ALL.json
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc       445 Mar  3 11:03 workernode_map.json
[2026-03-03 11:08:35] drwx------. 5 boinc boinc      4096 Mar  3 11:03 pilot3
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc       524 Mar  3 11:05 boinc_task_state.xml
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc       966 Mar  3 11:05 memory_monitor_summary.json
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc     21534 Mar  3 11:05 log.48955006._000316.job.log.tgz.1
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc      7017 Mar  3 11:07 heartbeat.json
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc        95 Mar  3 11:08 pilot_heartbeat.json
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc      4819 Mar  3 11:08 pilotlog.txt
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc      8192 Mar  3 11:08 boinc_mmap_file
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc        23 Mar  3 11:08 wrapper_checkpoint.txt
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc     90002 Mar  3 11:08 log.48955006._000316.job.log.1
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc       188 Mar  3 11:08 output.list
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc       620 Mar  3 11:08 runtime_log
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc    133120 Mar  3 11:08 result.tar.gz
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc      8635 Mar  3 11:08 runtime_log.err
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc       643 Mar  3 11:08 nTUNDmLRfH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPoELDm1AlyIn.diag
[2026-03-03 11:08:35] -rw-r--r--. 1 boinc boinc     21782 Mar  3 11:08 stderr.txt
[2026-03-03 11:08:35] No HITS result produced
[2026-03-03 11:08:35]  *** Contents of shared directory: ***
[2026-03-03 11:08:35] total 435920
[2026-03-03 11:08:35] -rw-r--r--. 2 boinc boinc 445624624 Mar  3 11:01 ATLAS.root_0
[2026-03-03 11:08:35] -rw-r--r--. 2 boinc boinc     15845 Mar  3 11:01 start_atlas.sh
[2026-03-03 11:08:35] -rw-r--r--. 2 boinc boinc    597939 Mar  3 11:01 input.tar.gz
[2026-03-03 11:08:35] -rw-------. 1 boinc boinc    133120 Mar  3 11:08 result.tar.gz
11:08:36 (3807695): run_atlas exited; CPU time 35.695062
11:08:36 (3807695): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN