Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:46:03 (1237108): wrapper (7.7.26015): starting
05:46:03 (1237108): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 05:46:03] Arguments: --nthreads 4
[2026-03-04 05:46:03] Threads: 4
[2026-03-04 05:46:03] Checking for CVMFS
[2026-03-04 05:46:03] No cvmfs_config command found, will try listing directly
[2026-03-04 05:46:03] CVMFS is ok
[2026-03-04 05:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 05:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 05:46:03] Further information can be found at the LHC@home message board.
[2026-03-04 05:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 05:46:03] Checking for apptainer binary...
[2026-03-04 05:46:03] which: no apptainer in ((null))
[2026-03-04 05:46:03] apptainer is not installed, using version from CVMFS
[2026-03-04 05:46:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 05:46:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-03-04 05:46:03] apptainer works
[2026-03-04 05:46:03] Set ATHENA_PROC_NUMBER=4
[2026-03-04 05:46:03] Set ATHENA_CORE_NUMBER=4
[2026-03-04 05:46:03] Starting ATLAS job with PandaID=7038487455
[2026-03-04 05:46:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 07:47:42]  *** The last 200 lines of the pilot log: ***
[2026-03-04 07:47:42] 2026-03-04 06:46:57,277 | INFO     | total number of processed events: 400 (read)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,300 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7038487455/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,301 | INFO     | extracted standard info from prmon json
[2026-03-04 07:47:42] 2026-03-04 06:46:57,301 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 07:47:42] 2026-03-04 06:46:57,301 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 07:47:42] 2026-03-04 06:46:57,301 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 07:47:42] 2026-03-04 06:46:57,302 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 07:47:42] 2026-03-04 06:46:57,304 | INFO     | fitting pss+swap vs Time
[2026-03-04 07:47:42] 2026-03-04 06:46:57,304 | INFO     | sum of square deviations: 522502820.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,305 | INFO     | sum of deviations: 4449009136.000001
[2026-03-04 07:47:42] 2026-03-04 06:46:57,305 | INFO     | mean x: 1772603209.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,305 | INFO     | mean y: 2290048.151260504
[2026-03-04 07:47:42] 2026-03-04 06:46:57,305 | INFO     | intersect: -15091078962.457945
[2026-03-04 07:47:42] 2026-03-04 06:46:57,305 | INFO     | chi2: 2.0760369903977725
[2026-03-04 07:47:42] 2026-03-04 06:46:57,306 | INFO     | sum of square deviations: 459366752.5
[2026-03-04 07:47:42] 2026-03-04 06:46:57,306 | INFO     | sum of deviations: 11466047206.999998
[2026-03-04 07:47:42] 2026-03-04 06:46:57,306 | INFO     | mean x: 1772603056.5
[2026-03-04 07:47:42] 2026-03-04 06:46:57,307 | INFO     | mean y: 2306385.807017544
[2026-03-04 07:47:42] 2026-03-04 06:46:57,307 | INFO     | intersect: -44242842429.3578
[2026-03-04 07:47:42] 2026-03-04 06:46:57,307 | INFO     | chi2: 1.275345681203909
[2026-03-04 07:47:42] 2026-03-04 06:46:57,307 | INFO     | current chi2=1.275345681203909 (change=38.56825831607411 %)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,307 | INFO     | sum of square deviations: 401533110.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,308 | INFO     | sum of deviations: 10919990335.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,308 | INFO     | mean x: 1772602904.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,308 | INFO     | mean y: 2304946.119266055
[2026-03-04 07:47:42] 2026-03-04 06:46:57,308 | INFO     | intersect: -48204943964.121124
[2026-03-04 07:47:42] 2026-03-04 06:46:57,308 | INFO     | chi2: 1.2775188683565046
[2026-03-04 07:47:42] 2026-03-04 06:46:57,308 | INFO     | current chi2=1.2775188683565046 (change=-0.17039985194791774 %)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,308 | INFO     | right removable region: 108
[2026-03-04 07:47:42] 2026-03-04 06:46:57,309 | INFO     | sum of square deviations: 459366752.5
[2026-03-04 07:47:42] 2026-03-04 06:46:57,309 | INFO     | sum of deviations: -9352737007.5
[2026-03-04 07:47:42] 2026-03-04 06:46:57,309 | INFO     | mean x: 1772603361.5
[2026-03-04 07:47:42] 2026-03-04 06:46:57,309 | INFO     | mean y: 2322608.289473684
[2026-03-04 07:47:42] 2026-03-04 06:46:57,310 | INFO     | intersect: 36092642529.124306
[2026-03-04 07:47:42] 2026-03-04 06:46:57,310 | INFO     | chi2: 0.840638085515134
[2026-03-04 07:47:42] 2026-03-04 06:46:57,310 | INFO     | current chi2=0.840638085515134 (change=59.507557456668145 %)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,310 | INFO     | sum of square deviations: 401533110.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,311 | INFO     | sum of deviations: -8532804623.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,311 | INFO     | mean x: 1772603514.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,311 | INFO     | mean y: 2320435.229357798
[2026-03-04 07:47:42] 2026-03-04 06:46:57,311 | INFO     | intersect: 37671142961.484406
[2026-03-04 07:47:42] 2026-03-04 06:46:57,311 | INFO     | chi2: 0.8414913571124285
[2026-03-04 07:47:42] 2026-03-04 06:46:57,311 | INFO     | current chi2=0.8414913571124285 (change=-0.10150284789579339 %)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,311 | INFO     | left removable region: 20
[2026-03-04 07:47:42] 2026-03-04 06:46:57,312 | INFO     | sum of square deviations: 211285822.0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,312 | INFO     | sum of deviations: 14147211.50000003
[2026-03-04 07:47:42] 2026-03-04 06:46:57,312 | INFO     | mean x: 1772603483.5
[2026-03-04 07:47:42] 2026-03-04 06:46:57,312 | INFO     | mean y: 2334042.4431818184
[2026-03-04 07:47:42] 2026-03-04 06:46:57,312 | INFO     | intersect: -116355399.89295048
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | chi2: 0.0025034821033597375
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | current memory leak: 0.07 B/s (using 88 data points, chi2=0.00)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | could have reported an average CPU frequency of 2753 MHz (8 samples)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | ..............................
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | . Timing measurements:
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | . get job = 0 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | . initial setup = 7 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,313 | INFO     | . payload setup = 8 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,314 | INFO     | . stage-in = 0 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,314 | INFO     | . payload execution = 7205 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,314 | INFO     | . stage-out = 0 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,314 | INFO     | . log creation = 0 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,314 | INFO     | ..............................
[2026-03-04 07:47:42] 2026-03-04 06:46:57,403 | INFO     | 
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | job summary report
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | --------------------------------------------------
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | PanDA job id: 7038487455
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | task id: 48955006
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | errors: (none)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | pilot state: finished 
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | transexitcode: 0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | exeerrorcode: 0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | exeerrordiag: 
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | exitcode: 0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | exitmsg: OK
[2026-03-04 07:47:42] 2026-03-04 06:46:57,404 | INFO     | cpuconsumptiontime: 27418 s
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | nevents: 400
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | neventsw: 0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | pid: 1246444
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | pgrp: 1246444
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | corecount: 4
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | event service: False
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | sizes: {0: 2286636, 1: 2287097, 11: 2287097, 7217: 2314653, 7218: 2314652, 7219: 2323912, 7221: 2324050}
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | --------------------------------------------------
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | 
[2026-03-04 07:47:42] 2026-03-04 06:46:57,405 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2026-03-04 07:47:42] 2026-03-04 06:46:57,433 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,434 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,434 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,434 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,434 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,435 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,436 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,436 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,436 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 07:47:42] 2026-03-04 06:46:57,436 | INFO     | job 7038487455 has completed (purged errors)
[2026-03-04 07:47:42] 2026-03-04 06:46:57,436 | INFO     | overall cleanup function is called
[2026-03-04 07:47:42] 2026-03-04 06:46:58,445 | INFO     | --- collectZombieJob: --- 10, [1246444]
[2026-03-04 07:47:42] 2026-03-04 06:46:58,446 | INFO     | zombie collector waiting for pid 1246444
[2026-03-04 07:47:42] 2026-03-04 06:46:58,446 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 07:47:42] 2026-03-04 06:46:58,446 | INFO     | collected zombie processes
[2026-03-04 07:47:42] 2026-03-04 06:46:58,446 | INFO     | will attempt to kill all subprocesses of pid=1246444
[2026-03-04 07:47:42] 2026-03-04 06:46:59,068 | INFO     | process IDs to be killed: [1246444] (in reverse order)
[2026-03-04 07:47:42] 2026-03-04 06:46:59,300 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 07:47:42] 2026-03-04 06:46:59,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 07:47:42] 2026-03-04 06:46:59,323 | INFO     | did not find any defunct processes belonging to 1246444
[2026-03-04 07:47:42] 2026-03-04 06:46:59,340 | INFO     | did not find any defunct processes belonging to 1246444
[2026-03-04 07:47:42] 2026-03-04 06:46:59,340 | INFO     | ready for new job
[2026-03-04 07:47:42] 2026-03-04 06:46:59,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 07:47:42] 2026-03-04 06:46:59,342 | INFO     | **************************************
[2026-03-04 07:47:42] 2026-03-04 06:46:59,343 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 07:47:42] 2026-03-04 06:46:59,343 | INFO     | **************************************
[2026-03-04 07:47:42] 2026-03-04 06:46:59,343 | INFO     | 
[2026-03-04 07:47:42] 2026-03-04 06:46:59,351 | INFO     | architecture information:
[2026-03-04 07:47:42] 2026-03-04 06:46:59,351 | INFO     | executing command: cat /etc/os-release
[2026-03-04 07:47:42] 2026-03-04 06:46:59,372 | INFO     | cat /etc/os-release:
[2026-03-04 07:47:42] NAME="CentOS Linux"
[2026-03-04 07:47:42] VERSION="7 (Core)"
[2026-03-04 07:47:42] ID="centos"
[2026-03-04 07:47:42] ID_LIKE="rhel fedora"
[2026-03-04 07:47:42] VERSION_ID="7"
[2026-03-04 07:47:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 07:47:42] ANSI_COLOR="0;31"
[2026-03-04 07:47:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 07:47:42] HOME_URL="https://www.centos.org/"
[2026-03-04 07:47:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 07:47:42] 
[2026-03-04 07:47:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 07:47:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 07:47:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 07:47:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 07:47:42] 
[2026-03-04 07:47:42] 2026-03-04 06:46:59,373 | INFO     | **************************************
[2026-03-04 07:47:42] 2026-03-04 06:46:59,876 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2026-03-04 07:47:42] 2026-03-04 06:46:59,900 | INFO     | sufficient remaining disk space (3319236919296 B)
[2026-03-04 07:47:42] 2026-03-04 06:46:59,900 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 07:47:42] 2026-03-04 06:46:59,900 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 07:47:42] 2026-03-04 06:46:59,900 | INFO     | update_server=False
[2026-03-04 07:47:42] 2026-03-04 06:46:59,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 07:47:42] 2026-03-04 06:47:00,145 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 07:47:42] 2026-03-04 06:47:00,146 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 07:47:42] 2026-03-04 06:47:00,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:47:42] 2026-03-04 06:47:00,146 | INFO     | will abort loop
[2026-03-04 07:47:42] 2026-03-04 06:47:00,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 07:47:42] 2026-03-04 06:47:00,575 | INFO     | all data control threads have been joined
[2026-03-04 07:47:42] 2026-03-04 06:47:00,728 | INFO     | all payload control threads have been joined
[2026-03-04 07:47:42] 2026-03-04 06:47:00,906 | INFO     | [job] retrieve thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:00,936 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 07:47:42] 2026-03-04 06:47:01,037 | INFO     | [job] validate thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,152 | INFO     | [job] job monitor thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,169 | INFO     | [payload] validate_post thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,260 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,290 | INFO     | all job control threads have been joined
[2026-03-04 07:47:42] 2026-03-04 06:47:01,445 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,580 | INFO     | [data] control thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,698 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,733 | INFO     | [payload] control thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:01,794 | INFO     | [data] copytool_in thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:02,206 | INFO     | [payload] failed_post thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:02,296 | INFO     | [job] control thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:02,358 | INFO     | [data] copytool_out thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:02,414 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 07:47:42] 2026-03-04 06:47:03,420 | INFO     | [job] queue monitor thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:04,942 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:10,126 | INFO     | job.realtimelogging is not enabled
[2026-03-04 07:47:42] 2026-03-04 06:47:11,130 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 07:47:42] 2026-03-04 06:47:30,371 | INFO     | PID=1241436 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 07:47:42] 2026-03-04 06:47:30,371 | INFO     | .. there are 19 such processes running
[2026-03-04 07:47:42] 2026-03-04 06:47:30,372 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 07:47:42] 2026-03-04 06:47:30,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 07:47:42] 2026-03-04 06:47:30,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 07:47:42] 2026-03-04 06:47:35,063 | INFO     | [monitor] cgroup control has ended
[2026-03-04 07:47:42] 2026-03-04 06:47:36,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22514634671936)>', '<ExcThread(monitor, started 22514391848704)>']
[2026-03-04 07:47:42] 2026-03-04 06:47:37,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 07:47:42] 2026-03-04 06:47:37,395 | INFO     | [monitor] control thread has ended
[2026-03-04 07:47:42] 2026-03-04 06:47:41,705 | INFO     | all workflow threads have been joined
[2026-03-04 07:47:42] 2026-03-04 06:47:41,705 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 07:47:42] 2026-03-04 06:47:41,705 | INFO     | traces error code: 0
[2026-03-04 07:47:42] 2026-03-04 06:47:41,706 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 07:47:42] 2026-03-04 06:47:41,913 [wrapper] ==== pilot stdout END ====
[2026-03-04 07:47:42] 2026-03-04 06:47:41,917 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 07:47:42] 2026-03-04 06:47:41,921 [wrapper] pilotpid: 1241436
[2026-03-04 07:47:42] 2026-03-04 06:47:41,924 [wrapper] Pilot exit status: 0
[2026-03-04 07:47:42] 2026-03-04 06:47:41,939 [wrapper] pandaids: 7038487455
[2026-03-04 07:47:42] 2026-03-04 06:47:42,086 [wrapper] cleanup supervisor_pilot 1486520 1241437
[2026-03-04 07:47:42] 2026-03-04 06:47:42,091 [wrapper] Test setup, not cleaning
[2026-03-04 07:47:42] 2026-03-04 06:47:42,098 [wrapper] apfmon messages muted
[2026-03-04 07:47:42] 2026-03-04 06:47:42,102 [wrapper] ==== wrapper stdout END ====
[2026-03-04 07:47:42] 2026-03-04 06:47:42,105 [wrapper] ==== wrapper stderr END ====
[2026-03-04 07:47:42]  *** Error codes and diagnostics ***
[2026-03-04 07:47:42]     "exeErrorCode": 0,
[2026-03-04 07:47:42]     "exeErrorDiag": "",
[2026-03-04 07:47:42]     "pilotErrorCode": 0,
[2026-03-04 07:47:42]     "pilotErrorDiag": "",
[2026-03-04 07:47:42]  *** Listing of results directory ***
[2026-03-04 07:47:42] total 616184
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc      5111 Mar  3 14:54 queuedata.json
[2026-03-04 07:47:42] -rwx------ 1 boinc boinc     36322 Mar  3 14:54 runpilot2-wrapper.sh
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc    584627 Mar  3 14:54 pilot3.tar.gz
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc       100 Mar  4 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 07:47:42] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 05:45 run_atlas
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc       105 Mar  4 05:45 job.xml
[2026-03-04 07:47:42] -rw-r--r-- 2 boinc boinc 439828168 Mar  4 05:46 EVNT.46701403._000009.pool.root.1
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc      6697 Mar  4 05:46 init_data.xml
[2026-03-04 07:47:42] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:46 start_atlas.sh
[2026-03-04 07:47:42] drwxrwx--x 2 boinc boinc      4096 Mar  4 05:46 shared
[2026-03-04 07:47:42] -rw-r--r-- 2 boinc boinc    597924 Mar  4 05:46 input.tar.gz
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc         0 Mar  4 05:46 boinc_lockfile
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc      2559 Mar  4 05:46 pandaJob.out
[2026-03-04 07:47:42] -rw------- 1 boinc boinc    997749 Mar  4 05:46 agis_schedconf.cvmfs.json
[2026-03-04 07:47:42] -rw------- 1 boinc boinc   1516092 Mar  4 05:46 agis_ddmendpoints.agis.ALL.json
[2026-03-04 07:47:42] -rw------- 1 boinc boinc       442 Mar  4 05:46 workernode_map.json
[2026-03-04 07:47:42] drwx------ 5 boinc boinc      4096 Mar  4 05:46 pilot3
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc       530 Mar  4 07:46 boinc_task_state.xml
[2026-03-04 07:47:42] -rw------- 1 boinc boinc 184482565 Mar  4 07:46 HITS.48955006._000437.pool.root.1
[2026-03-04 07:47:42] -rw------- 1 boinc boinc      1026 Mar  4 07:46 memory_monitor_summary.json
[2026-03-04 07:47:42] -rw------- 1 boinc boinc    333221 Mar  4 07:46 log.48955006._000437.job.log.tgz.1
[2026-03-04 07:47:42] -rw------- 1 boinc boinc      6343 Mar  4 07:46 heartbeat.json
[2026-03-04 07:47:42] -rw------- 1 boinc boinc        95 Mar  4 07:47 pilot_heartbeat.json
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc      8192 Mar  4 07:47 boinc_mmap_file
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc        27 Mar  4 07:47 wrapper_checkpoint.txt
[2026-03-04 07:47:42] -rw------- 1 boinc boinc      5089 Mar  4 07:47 pilotlog.txt
[2026-03-04 07:47:42] -rw------- 1 boinc boinc   1030628 Mar  4 07:47 log.48955006._000437.job.log.1
[2026-03-04 07:47:42] -rw------- 1 boinc boinc       357 Mar  4 07:47 output.list
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc       620 Mar  4 07:47 runtime_log
[2026-03-04 07:47:42] -rw------- 1 boinc boinc   1382400 Mar  4 07:47 result.tar.gz
[2026-03-04 07:47:42] -rw------- 1 boinc boinc       662 Mar  4 07:47 tulLDmIOfH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmxgELDmlqcuhm.diag
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc      9204 Mar  4 07:47 runtime_log.err
[2026-03-04 07:47:42] -rw-r--r-- 1 boinc boinc     20814 Mar  4 07:47 stderr.txt
[2026-03-04 07:47:42] HITS file was successfully produced:
[2026-03-04 07:47:42] -rw------- 1 boinc boinc 184482565 Mar  4 07:46 shared/HITS.pool.root.1
[2026-03-04 07:47:42]  *** Contents of shared directory: ***
[2026-03-04 07:47:42] total 611640
[2026-03-04 07:47:42] -rw-r--r-- 2 boinc boinc 439828168 Mar  4 05:46 ATLAS.root_0
[2026-03-04 07:47:42] -rw-r--r-- 2 boinc boinc     15845 Mar  4 05:46 start_atlas.sh
[2026-03-04 07:47:42] -rw-r--r-- 2 boinc boinc    597924 Mar  4 05:46 input.tar.gz
[2026-03-04 07:47:42] -rw------- 1 boinc boinc 184482565 Mar  4 07:46 HITS.pool.root.1
[2026-03-04 07:47:42] -rw------- 1 boinc boinc   1382400 Mar  4 07:47 result.tar.gz
07:47:43 (1237108): run_atlas exited; CPU time 27782.590854
07:47:43 (1237108): called boinc_finish(0)

</stderr_txt>
]]>

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