Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:25 (10278): wrapper (7.7.26015): starting
04:44:25 (10278): wrapper: running run_atlas (--nthreads 8)
[2026-03-04 04:44:25] Arguments: --nthreads 8
[2026-03-04 04:44:25] Threads: 8
[2026-03-04 04:44:25] Checking for CVMFS
[2026-03-04 04:44:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-04 04:44:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-04 04:44:25] Running cvmfs_config stat atlas.cern.ch
[2026-03-04 04:44:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-04 04:44:25] 2.11.2.0 17738 112652 134432 156867 1 141 14452205 25165825 758 130560 159 34130524 99.794 28720459 970 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-04 04:44:25] CVMFS is ok
[2026-03-04 04:44:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 04:44:25] Checking for apptainer binary...
[2026-03-04 04:44:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-04 04:44:25] Running /usr/bin/apptainer --version
[2026-03-04 04:44:25] apptainer version 1.3.2-1.el7
[2026-03-04 04:44:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 04:44:27] cg-vwn450.simple-grid.lan
[2026-03-04 04:44:27] apptainer works
[2026-03-04 04:44:27] Set ATHENA_PROC_NUMBER=8
[2026-03-04 04:44:27] Set ATHENA_CORE_NUMBER=8
[2026-03-04 04:44:27] Starting ATLAS job with PandaID=7036250386
[2026-03-04 04:44:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 08:12:24]  *** The last 200 lines of the pilot log: ***
[2026-03-04 08:12:24] 2026-03-04 07:11:26,859 | INFO     | total number of processed events: 400 (read)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,861 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-7036250386/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,862 | INFO     | extracted standard info from prmon json
[2026-03-04 08:12:24] 2026-03-04 07:11:26,862 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 08:12:24] 2026-03-04 07:11:26,862 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 08:12:24] 2026-03-04 07:11:26,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 08:12:24] 2026-03-04 07:11:26,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 08:12:24] 2026-03-04 07:11:26,867 | INFO     | fitting pss+swap vs Time
[2026-03-04 08:12:24] 2026-03-04 07:11:26,868 | INFO     | sum of square deviations: 2593916542.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,869 | INFO     | sum of deviations: -9953138261.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,869 | INFO     | mean x: 1772602072.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,870 | INFO     | mean y: 2477492.2561576352
[2026-03-04 08:12:24] 2026-03-04 07:11:26,870 | INFO     | intersect: 6804143320.235244
[2026-03-04 08:12:24] 2026-03-04 07:11:26,870 | INFO     | chi2: 2.425899548119929
[2026-03-04 08:12:24] 2026-03-04 07:11:26,870 | INFO     | sum of square deviations: 2406926989.5
[2026-03-04 08:12:24] 2026-03-04 07:11:26,872 | INFO     | sum of deviations: 3741333160.5000024
[2026-03-04 08:12:24] 2026-03-04 07:11:26,872 | INFO     | mean x: 1772601919.5
[2026-03-04 08:12:24] 2026-03-04 07:11:26,872 | INFO     | mean y: 2488444.8131313133
[2026-03-04 08:12:24] 2026-03-04 07:11:26,873 | INFO     | intersect: -2752848285.6827836
[2026-03-04 08:12:24] 2026-03-04 07:11:26,873 | INFO     | chi2: 1.6573575356013202
[2026-03-04 08:12:24] 2026-03-04 07:11:26,873 | INFO     | current chi2=1.6573575356013202 (change=31.680702241534625 %)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,874 | INFO     | sum of square deviations: 2229146912.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,875 | INFO     | sum of deviations: 3778441443.0000033
[2026-03-04 08:12:24] 2026-03-04 07:11:26,875 | INFO     | mean x: 1772601767.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,875 | INFO     | mean y: 2488476.803108808
[2026-03-04 08:12:24] 2026-03-04 07:11:26,875 | INFO     | intersect: -3002101280.0732813
[2026-03-04 08:12:24] 2026-03-04 07:11:26,876 | INFO     | chi2: 1.65796313346065
[2026-03-04 08:12:24] 2026-03-04 07:11:26,876 | INFO     | current chi2=1.65796313346065 (change=-0.03653996475238912 %)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,876 | INFO     | right removable region: 192
[2026-03-04 08:12:24] 2026-03-04 07:11:26,877 | INFO     | sum of square deviations: 2406926989.5
[2026-03-04 08:12:24] 2026-03-04 07:11:26,878 | INFO     | sum of deviations: -41241968148.5
[2026-03-04 08:12:24] 2026-03-04 07:11:26,878 | INFO     | mean x: 1772602224.5
[2026-03-04 08:12:24] 2026-03-04 07:11:26,878 | INFO     | mean y: 2502738.6515151514
[2026-03-04 08:12:24] 2026-03-04 07:11:26,878 | INFO     | intersect: 30375507321.551533
[2026-03-04 08:12:24] 2026-03-04 07:11:26,879 | INFO     | chi2: 0.9474915594354051
[2026-03-04 08:12:24] 2026-03-04 07:11:26,879 | INFO     | current chi2=0.9474915594354051 (change=60.94267134145309 %)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,879 | INFO     | sum of square deviations: 2229146912.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,881 | INFO     | sum of deviations: -38850659477.00001
[2026-03-04 08:12:24] 2026-03-04 07:11:26,881 | INFO     | mean x: 1772602377.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,881 | INFO     | mean y: 2500641.6321243523
[2026-03-04 08:12:24] 2026-03-04 07:11:26,881 | INFO     | intersect: 30896279318.22919
[2026-03-04 08:12:24] 2026-03-04 07:11:26,881 | INFO     | chi2: 0.9337501154007065
[2026-03-04 08:12:24] 2026-03-04 07:11:26,882 | INFO     | current chi2=0.9337501154007065 (change=1.4502972504458902 %)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,882 | INFO     | left removable region: 20
[2026-03-04 08:12:24] 2026-03-04 07:11:26,882 | INFO     | sum of square deviations: 1577789583.0
[2026-03-04 08:12:24] 2026-03-04 07:11:26,883 | INFO     | sum of deviations: -11709884215.000004
[2026-03-04 08:12:24] 2026-03-04 07:11:26,884 | INFO     | mean x: 1772602346.5
[2026-03-04 08:12:24] 2026-03-04 07:11:26,884 | INFO     | mean y: 2500474.11627907
[2026-03-04 08:12:24] 2026-03-04 07:11:26,884 | INFO     | intersect: 13158226979.348454
[2026-03-04 08:12:24] 2026-03-04 07:11:26,884 | INFO     | chi2: 0.09200131510824054
[2026-03-04 08:12:24] 2026-03-04 07:11:26,884 | INFO     | current memory leak: -7.42 B/s (using 172 data points, chi2=0.09)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,885 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2026-03-04 08:12:24] 2026-03-04 07:11:26,885 | INFO     | ..............................
[2026-03-04 08:12:24] 2026-03-04 07:11:26,885 | INFO     | . Timing measurements:
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | . get job = 0 s
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | . initial setup = 8 s
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | . payload setup = 9 s
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | . stage-in = 0 s
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | . payload execution = 12370 s
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | . stage-out = 3 s
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | . log creation = 1 s
[2026-03-04 08:12:24] 2026-03-04 07:11:26,886 | INFO     | ..............................
[2026-03-04 08:12:24] 2026-03-04 07:11:27,032 | INFO     | 
[2026-03-04 08:12:24] 2026-03-04 07:11:27,032 | INFO     | job summary report
[2026-03-04 08:12:24] 2026-03-04 07:11:27,032 | INFO     | --------------------------------------------------
[2026-03-04 08:12:24] 2026-03-04 07:11:27,032 | INFO     | PanDA job id: 7036250386
[2026-03-04 08:12:24] 2026-03-04 07:11:27,032 | INFO     | task id: 48700946
[2026-03-04 08:12:24] 2026-03-04 07:11:27,032 | INFO     | errors: (none)
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | pilot state: finished 
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | transexitcode: 0
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | exeerrorcode: 0
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | exeerrordiag: 
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | exitcode: 0
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | exitmsg: OK
[2026-03-04 08:12:24] 2026-03-04 07:11:27,033 | INFO     | cpuconsumptiontime: 45930 s
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | nevents: 400
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | neventsw: 0
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | pid: 18440
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | pgrp: 18440
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | corecount: 8
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | event service: False
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | sizes: {0: 2286505, 1: 2287022, 2: 2287022, 12383: 2316737, 12388: 2325737, 12391: 2325793, 12394: 2326115}
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | --------------------------------------------------
[2026-03-04 08:12:24] 2026-03-04 07:11:27,034 | INFO     | 
[2026-03-04 08:12:24] 2026-03-04 07:11:27,035 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-03-04 08:12:24] 2026-03-04 07:11:27,519 | INFO     | time since job start (12396s) is within the limit (349056.0s)
[2026-03-04 08:12:24] 2026-03-04 07:11:27,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,593 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 08:12:24] 2026-03-04 07:11:27,596 | INFO     | job 7036250386 has completed (purged errors)
[2026-03-04 08:12:24] 2026-03-04 07:11:27,596 | INFO     | overall cleanup function is called
[2026-03-04 08:12:24] 2026-03-04 07:11:28,604 | INFO     | --- collectZombieJob: --- 10, [18440]
[2026-03-04 08:12:24] 2026-03-04 07:11:28,604 | INFO     | zombie collector waiting for pid 18440
[2026-03-04 08:12:24] 2026-03-04 07:11:28,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 08:12:24] 2026-03-04 07:11:28,604 | INFO     | collected zombie processes
[2026-03-04 08:12:24] 2026-03-04 07:11:28,604 | INFO     | will attempt to kill all subprocesses of pid=18440
[2026-03-04 08:12:24] 2026-03-04 07:11:28,686 | INFO     | process IDs to be killed: [18440] (in reverse order)
[2026-03-04 08:12:24] 2026-03-04 07:11:28,932 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 08:12:24] 2026-03-04 07:11:28,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 08:12:24] 2026-03-04 07:11:28,935 | INFO     | did not find any defunct processes belonging to 18440
[2026-03-04 08:12:24] 2026-03-04 07:11:28,937 | INFO     | did not find any defunct processes belonging to 18440
[2026-03-04 08:12:24] 2026-03-04 07:11:28,937 | INFO     | ready for new job
[2026-03-04 08:12:24] 2026-03-04 07:11:28,937 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 08:12:24] 2026-03-04 07:11:28,939 | INFO     | **************************************
[2026-03-04 08:12:24] 2026-03-04 07:11:28,939 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 08:12:24] 2026-03-04 07:11:28,939 | INFO     | **************************************
[2026-03-04 08:12:24] 2026-03-04 07:11:28,939 | INFO     | 
[2026-03-04 08:12:24] 2026-03-04 07:11:28,940 | INFO     | pilot is running in a VM
[2026-03-04 08:12:24] 2026-03-04 07:11:28,940 | INFO     | architecture information:
[2026-03-04 08:12:24] 2026-03-04 07:11:28,941 | INFO     | executing command: cat /etc/os-release
[2026-03-04 08:12:24] 2026-03-04 07:11:28,979 | INFO     | cat /etc/os-release:
[2026-03-04 08:12:24] NAME="CentOS Linux"
[2026-03-04 08:12:24] VERSION="7 (Core)"
[2026-03-04 08:12:24] ID="centos"
[2026-03-04 08:12:24] ID_LIKE="rhel fedora"
[2026-03-04 08:12:24] VERSION_ID="7"
[2026-03-04 08:12:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 08:12:24] ANSI_COLOR="0;31"
[2026-03-04 08:12:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 08:12:24] HOME_URL="https://www.centos.org/"
[2026-03-04 08:12:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 08:12:24] 
[2026-03-04 08:12:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 08:12:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 08:12:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 08:12:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 08:12:24] 
[2026-03-04 08:12:24] 2026-03-04 07:11:28,980 | INFO     | **************************************
[2026-03-04 08:12:24] 2026-03-04 07:11:29,482 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-03-04 08:12:24] 2026-03-04 07:11:29,691 | INFO     | sufficient remaining disk space (496275292160 B)
[2026-03-04 08:12:24] 2026-03-04 07:11:29,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 08:12:24] 2026-03-04 07:11:29,691 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 08:12:24] 2026-03-04 07:11:29,691 | INFO     | update_server=False
[2026-03-04 08:12:24] 2026-03-04 07:11:29,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 08:12:24] 2026-03-04 07:11:29,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 08:12:24] 2026-03-04 07:11:29,905 | INFO     | all job control threads have been joined
[2026-03-04 08:12:24] 2026-03-04 07:11:30,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:12:24] 2026-03-04 07:11:30,020 | INFO     | aborting loop
[2026-03-04 08:12:24] 2026-03-04 07:11:30,260 | INFO     | all data control threads have been joined
[2026-03-04 08:12:24] 2026-03-04 07:11:30,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 08:12:24] 2026-03-04 07:11:30,697 | INFO     | [job] retrieve thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:30,765 | INFO     | [payload] failed_post thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:30,818 | INFO     | [payload] validate_post thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:30,821 | INFO     | [job] validate thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:30,911 | INFO     | [job] control thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:31,027 | INFO     | [job] job monitor thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:31,170 | INFO     | [data] copytool_in thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:31,170 | INFO     | all payload control threads have been joined
[2026-03-04 08:12:24] 2026-03-04 07:11:31,266 | INFO     | [data] control thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:31,476 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:31,484 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:31,700 | INFO     | [data] copytool_out thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:31,972 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:32,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 08:12:24] 2026-03-04 07:11:32,176 | INFO     | [payload] control thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:33,048 | INFO     | [job] queue monitor thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:34,542 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:11:40,151 | INFO     | job.realtimelogging is not enabled
[2026-03-04 08:12:24] 2026-03-04 07:11:41,157 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 08:12:24] 2026-03-04 07:12:00,654 | INFO     | PID=13992 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-04 08:12:24] 2026-03-04 07:12:00,655 | INFO     | .. there are 2 such processes running
[2026-03-04 08:12:24] 2026-03-04 07:12:00,655 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 08:12:24] 2026-03-04 07:12:00,655 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 08:12:24] 2026-03-04 07:12:00,655 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 08:12:24] 2026-03-04 07:12:12,726 | INFO     | [monitor] cgroup control has ended
[2026-03-04 08:12:24] 2026-03-04 07:12:13,441 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140643139024704)>', '<ExcThread(monitor, started 140642680280832)>']
[2026-03-04 08:12:24] 2026-03-04 07:12:13,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 08:12:24] 2026-03-04 07:12:13,732 | INFO     | [monitor] control thread has ended
[2026-03-04 08:12:24] 2026-03-04 07:12:18,467 | INFO     | all workflow threads have been joined
[2026-03-04 08:12:24] 2026-03-04 07:12:18,467 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 08:12:24] 2026-03-04 07:12:18,467 | INFO     | traces error code: 0
[2026-03-04 08:12:24] 2026-03-04 07:12:18,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 08:12:24] 2026-03-04 07:12:18,846 [wrapper] ==== pilot stdout END ====
[2026-03-04 08:12:24] 2026-03-04 07:12:18,984 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 08:12:24] 2026-03-04 07:12:19,081 [wrapper] pilotpid: 13992
[2026-03-04 08:12:24] 2026-03-04 07:12:19,152 [wrapper] Pilot exit status: 0
[2026-03-04 08:12:24] 2026-03-04 07:12:19,680 [wrapper] pandaids: 7036250386
[2026-03-04 08:12:24] 2026-03-04 07:12:20,622 [wrapper] cleanup supervisor_pilot 24947 13993
[2026-03-04 08:12:24] 2026-03-04 07:12:20,710 [wrapper] Test setup, not cleaning
[2026-03-04 08:12:24] 2026-03-04 07:12:20,799 [wrapper] apfmon messages muted
[2026-03-04 08:12:24] 2026-03-04 07:12:20,883 [wrapper] ==== wrapper stdout END ====
[2026-03-04 08:12:24] 2026-03-04 07:12:21,013 [wrapper] ==== wrapper stderr END ====
[2026-03-04 08:12:24]  *** Error codes and diagnostics ***
[2026-03-04 08:12:24]     "exeErrorCode": 0,
[2026-03-04 08:12:24]     "exeErrorDiag": "",
[2026-03-04 08:12:24]     "pilotErrorCode": 0,
[2026-03-04 08:12:24]     "pilotErrorDiag": "",
[2026-03-04 08:12:24]  *** Listing of results directory ***
[2026-03-04 08:12:24] total 338336
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc      5111 Mar  3 10:01 queuedata.json
[2026-03-04 08:12:24] -rwx------. 1 boinc boinc     36322 Mar  3 10:01 runpilot2-wrapper.sh
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc       100 Mar  4 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 08:12:24] -rwxr-xr-x. 1 boinc boinc      7986 Mar  4 04:44 run_atlas
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc       105 Mar  4 04:44 job.xml
[2026-03-04 08:12:24] -rw-r--r--. 2 boinc boinc 190152111 Mar  4 04:44 EVNT.48700944._000112.pool.root.1
[2026-03-04 08:12:24] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:44 start_atlas.sh
[2026-03-04 08:12:24] drwxrwx--x. 2 boinc boinc        68 Mar  4 04:44 shared
[2026-03-04 08:12:24] -rw-r--r--. 2 boinc boinc    597933 Mar  4 04:44 input.tar.gz
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc      6392 Mar  4 04:44 init_data.xml
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc         0 Mar  4 04:44 boinc_lockfile
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc      2500 Mar  4 04:44 pandaJob.out
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc    997749 Mar  4 04:44 agis_schedconf.cvmfs.json
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc       415 Mar  4 04:44 workernode_map.json
[2026-03-04 08:12:24] drwx------. 5 boinc boinc      4096 Mar  4 04:44 pilot3
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc 148041146 Mar  4 08:10 HITS.48700946._002881.pool.root.1
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc       530 Mar  4 08:10 boinc_task_state.xml
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc        95 Mar  4 08:11 pilot_heartbeat.json
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc      1012 Mar  4 08:11 memory_monitor_summary.json
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc   1516092 Mar  4 08:11 agis_ddmendpoints.agis.ALL.json
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc    431708 Mar  4 08:11 log.48700946._002881.job.log.tgz.1
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc      6299 Mar  4 08:11 heartbeat.json
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc      8192 Mar  4 08:12 boinc_mmap_file
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc        28 Mar  4 08:12 wrapper_checkpoint.txt
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc      4953 Mar  4 08:12 pilotlog.txt
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc   1742950 Mar  4 08:12 log.48700946._002881.job.log.1
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc       357 Mar  4 08:12 output.list
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc       620 Mar  4 08:12 runtime_log
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc   2191360 Mar  4 08:12 result.tar.gz
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc      8832 Mar  4 08:12 runtime_log.err
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc       654 Mar  4 08:12 a4lLDmUoaH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmVFGLDmz4BCLn.diag
[2026-03-04 08:12:24] -rw-r--r--. 1 boinc boinc     20702 Mar  4 08:12 stderr.txt
[2026-03-04 08:12:24] HITS file was successfully produced:
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc 148041146 Mar  4 08:10 shared/HITS.pool.root.1
[2026-03-04 08:12:24]  *** Contents of shared directory: ***
[2026-03-04 08:12:24] total 333008
[2026-03-04 08:12:24] -rw-r--r--. 2 boinc boinc 190152111 Mar  4 04:44 ATLAS.root_0
[2026-03-04 08:12:24] -rw-r--r--. 2 boinc boinc     15845 Mar  4 04:44 start_atlas.sh
[2026-03-04 08:12:24] -rw-r--r--. 2 boinc boinc    597933 Mar  4 04:44 input.tar.gz
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc 148041146 Mar  4 08:10 HITS.pool.root.1
[2026-03-04 08:12:24] -rw-------. 1 boinc boinc   2191360 Mar  4 08:12 result.tar.gz
08:12:26 (10278): run_atlas exited; CPU time 46058.985489
08:12:26 (10278): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN