Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:49:55 (1470644): wrapper (7.7.26015): starting
03:49:55 (1470644): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 03:49:55] Arguments: --nthreads 4
[2026-03-04 03:49:55] Threads: 4
[2026-03-04 03:49:55] Checking for CVMFS
[2026-03-04 03:49:55] No cvmfs_config command found, will try listing directly
[2026-03-04 03:49:55] CVMFS is ok
[2026-03-04 03:49:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 03:49:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 03:49:55] Further information can be found at the LHC@home message board.
[2026-03-04 03:49:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 03:49:55] Checking for apptainer binary...
[2026-03-04 03:49:55] which: no apptainer in ((null))
[2026-03-04 03:49:55] apptainer is not installed, using version from CVMFS
[2026-03-04 03:49:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 03:49:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-03-04 03:49:56] apptainer works
[2026-03-04 03:49:56] Set ATHENA_PROC_NUMBER=4
[2026-03-04 03:49:56] Set ATHENA_CORE_NUMBER=4
[2026-03-04 03:49:56] Starting ATLAS job with PandaID=7036250411
[2026-03-04 03:49:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 05:27:31]  *** The last 200 lines of the pilot log: ***
[2026-03-04 05:27:31]  filesize=278039
[2026-03-04 05:27:31]  filetype=log
[2026-03-04 05:27:31]  guid=935b2ecf-356a-474f-80ba-a934a74f6ed1
[2026-03-04 05:27:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-04 05:27:31]  is_altstaged=None
[2026-03-04 05:27:31]  is_tar=False
[2026-03-04 05:27:31]  lfn=log.48700946._002906.job.log.tgz.1
[2026-03-04 05:27:31]  mtime=0
[2026-03-04 05:27:31]  protocol_id=None
[2026-03-04 05:27:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-04 05:27:31]  replicas=None
[2026-03-04 05:27:31]  scope=mc23_13p6TeV
[2026-03-04 05:27:31]  status=None
[2026-03-04 05:27:31]  status_code=0
[2026-03-04 05:27:31]  storage_token=
[2026-03-04 05:27:31]  surl=/scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036250411/log.48700946._002906.job.log.tgz.1
[2026-03-04 05:27:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/80/log.48700946._002906.job.log.tgz.1
[2026-03-04 05:27:31]  workdir=None
[2026-03-04 05:27:31] ]
[2026-03-04 05:27:31] 2026-03-04 04:26:32,429 | INFO     | transferring file log.48700946._002906.job.log.tgz.1 from /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036250411/log.48700946._002906.job.log.tgz.1 to /scratch/b
[2026-03-04 05:27:31] 2026-03-04 04:26:32,429 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036250411/log.48700946._002906.job.log.tgz.1 /scratch/boinc/var/slot56/slots/0/lo
[2026-03-04 05:27:31] 2026-03-04 04:26:32,455 | INFO     | adding to output.list: log.48700946._002906.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/80/log.48700946._002906.job.log.tg
[2026-03-04 05:27:31] 2026-03-04 04:26:32,456 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-04 05:27:31] 2026-03-04 04:26:32,456 | INFO     | summary of transferred files:
[2026-03-04 05:27:31] 2026-03-04 04:26:32,456 | INFO     |  -- lfn=log.48700946._002906.job.log.tgz.1, status_code=0, status=transferred
[2026-03-04 05:27:31] 2026-03-04 04:26:32,456 | INFO     | stage-out finished correctly
[2026-03-04 05:27:31] 2026-03-04 04:26:32,541 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-04 05:27:31] 2026-03-04 04:26:33,543 | INFO     | monitor loop #411: job 0:7036250411 is in state 'finished'
[2026-03-04 05:27:31] 2026-03-04 04:26:33,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-04 05:27:31] 2026-03-04 04:26:33,588 | INFO     | time since job start (5777s) is within the limit (349056.0s)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,108 | INFO     | job 7036250411 has state=finished
[2026-03-04 05:27:31] 2026-03-04 04:26:35,108 | INFO     | preparing for final server update for job 7036250411 in state='finished'
[2026-03-04 05:27:31] 2026-03-04 04:26:35,109 | INFO     | reading metadata from: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036250411/jobReport.json
[2026-03-04 05:27:31] 2026-03-04 04:26:35,112 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot56/slots/0/workernode_map.json
[2026-03-04 05:27:31] 2026-03-04 04:26:35,112 | INFO     | this job has now completed (state=finished)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,112 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,112 | INFO     | log transfer has been attempted: DONE
[2026-03-04 05:27:31] 2026-03-04 04:26:35,112 | INFO     | job 7036250411 has finished - writing final server update
[2026-03-04 05:27:31] 2026-03-04 04:26:35,113 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2946805/.job.ad'
[2026-03-04 05:27:31] 2026-03-04 04:26:35,113 | INFO     | total number of processed events: 400 (read)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,137 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036250411/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,137 | INFO     | extracted standard info from prmon json
[2026-03-04 05:27:31] 2026-03-04 04:26:35,138 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 05:27:31] 2026-03-04 04:26:35,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 05:27:31] 2026-03-04 04:26:35,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 05:27:31] 2026-03-04 04:26:35,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 05:27:31] 2026-03-04 04:26:35,140 | INFO     | fitting pss+swap vs Time
[2026-03-04 05:27:31] 2026-03-04 04:26:35,141 | INFO     | sum of square deviations: 211285822.0
[2026-03-04 05:27:31] 2026-03-04 04:26:35,141 | INFO     | sum of deviations: -1573647835.4999998
[2026-03-04 05:27:31] 2026-03-04 04:26:35,141 | INFO     | mean x: 1772595600.5
[2026-03-04 05:27:31] 2026-03-04 04:26:35,141 | INFO     | mean y: 2325332.8295454546
[2026-03-04 05:27:31] 2026-03-04 04:26:35,141 | INFO     | intersect: 13204542138.194021
[2026-03-04 05:27:31] 2026-03-04 04:26:35,142 | INFO     | chi2: 0.006061568182738977
[2026-03-04 05:27:31] 2026-03-04 04:26:35,142 | INFO     | current memory leak: -7.45 B/s (using 88 data points, chi2=0.01)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,142 | INFO     | could have reported an average CPU frequency of 2764 MHz (7 samples)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,142 | INFO     | ..............................
[2026-03-04 05:27:31] 2026-03-04 04:26:35,142 | INFO     | . Timing measurements:
[2026-03-04 05:27:31] 2026-03-04 04:26:35,142 | INFO     | . get job = 0 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,143 | INFO     | . initial setup = 7 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,143 | INFO     | . payload setup = 8 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,143 | INFO     | . stage-in = 0 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,143 | INFO     | . payload execution = 5751 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,143 | INFO     | . stage-out = 0 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,143 | INFO     | . log creation = 0 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,143 | INFO     | ..............................
[2026-03-04 05:27:31] 2026-03-04 04:26:35,236 | INFO     | 
[2026-03-04 05:27:31] 2026-03-04 04:26:35,239 | INFO     | job summary report
[2026-03-04 05:27:31] 2026-03-04 04:26:35,239 | INFO     | --------------------------------------------------
[2026-03-04 05:27:31] 2026-03-04 04:26:35,239 | INFO     | PanDA job id: 7036250411
[2026-03-04 05:27:31] 2026-03-04 04:26:35,239 | INFO     | task id: 48700946
[2026-03-04 05:27:31] 2026-03-04 04:26:35,239 | INFO     | errors: (none)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,239 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 05:27:31] 2026-03-04 04:26:35,239 | INFO     | pilot state: finished 
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | transexitcode: 0
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | exeerrorcode: 0
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | exeerrordiag: 
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | exitcode: 0
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | exitmsg: OK
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | cpuconsumptiontime: 21927 s
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | nevents: 400
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | neventsw: 0
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | pid: 1480498
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | pgrp: 1480498
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | corecount: 4
[2026-03-04 05:27:31] 2026-03-04 04:26:35,240 | INFO     | event service: False
[2026-03-04 05:27:31] 2026-03-04 04:26:35,241 | INFO     | sizes: {0: 2285903, 1: 2287032, 12: 2287032, 5763: 2313665, 5764: 2322741, 5767: 2322879}
[2026-03-04 05:27:31] 2026-03-04 04:26:35,241 | INFO     | --------------------------------------------------
[2026-03-04 05:27:31] 2026-03-04 04:26:35,241 | INFO     | 
[2026-03-04 05:27:31] 2026-03-04 04:26:35,241 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-03-04 05:27:31] 2026-03-04 04:26:35,274 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,275 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,276 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 05:27:31] 2026-03-04 04:26:35,277 | INFO     | job 7036250411 has completed (purged errors)
[2026-03-04 05:27:31] 2026-03-04 04:26:35,277 | INFO     | overall cleanup function is called
[2026-03-04 05:27:31] 2026-03-04 04:26:36,286 | INFO     | --- collectZombieJob: --- 10, [1480498]
[2026-03-04 05:27:31] 2026-03-04 04:26:36,286 | INFO     | zombie collector waiting for pid 1480498
[2026-03-04 05:27:31] 2026-03-04 04:26:36,286 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 05:27:31] 2026-03-04 04:26:36,286 | INFO     | collected zombie processes
[2026-03-04 05:27:31] 2026-03-04 04:26:36,286 | INFO     | will attempt to kill all subprocesses of pid=1480498
[2026-03-04 05:27:31] 2026-03-04 04:26:36,884 | INFO     | process IDs to be killed: [1480498] (in reverse order)
[2026-03-04 05:27:31] 2026-03-04 04:26:37,114 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 05:27:31] 2026-03-04 04:26:37,115 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 05:27:31] 2026-03-04 04:26:37,136 | INFO     | did not find any defunct processes belonging to 1480498
[2026-03-04 05:27:31] 2026-03-04 04:26:37,153 | INFO     | did not find any defunct processes belonging to 1480498
[2026-03-04 05:27:31] 2026-03-04 04:26:37,153 | INFO     | ready for new job
[2026-03-04 05:27:31] 2026-03-04 04:26:37,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 05:27:31] 2026-03-04 04:26:37,156 | INFO     | **************************************
[2026-03-04 05:27:31] 2026-03-04 04:26:37,156 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 05:27:31] 2026-03-04 04:26:37,156 | INFO     | **************************************
[2026-03-04 05:27:31] 2026-03-04 04:26:37,156 | INFO     | 
[2026-03-04 05:27:31] 2026-03-04 04:26:37,164 | INFO     | architecture information:
[2026-03-04 05:27:31] 2026-03-04 04:26:37,164 | INFO     | executing command: cat /etc/os-release
[2026-03-04 05:27:31] 2026-03-04 04:26:37,187 | INFO     | cat /etc/os-release:
[2026-03-04 05:27:31] NAME="CentOS Linux"
[2026-03-04 05:27:31] VERSION="7 (Core)"
[2026-03-04 05:27:31] ID="centos"
[2026-03-04 05:27:31] ID_LIKE="rhel fedora"
[2026-03-04 05:27:31] VERSION_ID="7"
[2026-03-04 05:27:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 05:27:31] ANSI_COLOR="0;31"
[2026-03-04 05:27:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 05:27:31] HOME_URL="https://www.centos.org/"
[2026-03-04 05:27:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 05:27:31] 
[2026-03-04 05:27:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 05:27:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 05:27:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 05:27:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 05:27:31] 
[2026-03-04 05:27:31] 2026-03-04 04:26:37,191 | INFO     | **************************************
[2026-03-04 05:27:31] 2026-03-04 04:26:37,694 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-03-04 05:27:31] 2026-03-04 04:26:37,719 | INFO     | sufficient remaining disk space (3322150912000 B)
[2026-03-04 05:27:31] 2026-03-04 04:26:37,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 05:27:31] 2026-03-04 04:26:37,720 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 05:27:31] 2026-03-04 04:26:37,720 | INFO     | update_server=False
[2026-03-04 05:27:31] 2026-03-04 04:26:37,720 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 05:27:31] 2026-03-04 04:26:37,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 05:27:31] 2026-03-04 04:26:37,721 | INFO     | aborting loop
[2026-03-04 05:27:31] 2026-03-04 04:26:37,861 | INFO     | all job control threads have been joined
[2026-03-04 05:27:31] 2026-03-04 04:26:38,049 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 05:27:31] 2026-03-04 04:26:38,160 | INFO     | all data control threads have been joined
[2026-03-04 05:27:31] 2026-03-04 04:26:38,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 05:27:31] 2026-03-04 04:26:38,726 | INFO     | [job] retrieve thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:38,726 | INFO     | [job] job monitor thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:38,763 | INFO     | all payload control threads have been joined
[2026-03-04 05:27:31] 2026-03-04 04:26:38,866 | INFO     | [job] control thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:38,870 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:39,166 | INFO     | [data] control thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:39,226 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:39,328 | INFO     | [data] copytool_in thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:39,768 | INFO     | [payload] control thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:39,833 | INFO     | [payload] validate_post thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:39,906 | INFO     | [job] validate thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:39,938 | INFO     | [payload] failed_post thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:40,054 | INFO     | [data] copytool_out thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:40,161 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:40,200 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:40,246 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 05:27:31] 2026-03-04 04:26:41,252 | INFO     | [job] queue monitor thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:26:42,645 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 05:27:31] 2026-03-04 04:27:07,354 | INFO     | PID=1475498 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 05:27:31] 2026-03-04 04:27:07,354 | INFO     | .. there are 17 such processes running
[2026-03-04 05:27:31] 2026-03-04 04:27:07,354 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 05:27:31] 2026-03-04 04:27:07,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 05:27:31] 2026-03-04 04:27:07,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 05:27:31] 2026-03-04 04:27:24,688 | INFO     | [monitor] cgroup control has ended
[2026-03-04 05:27:31] 2026-03-04 04:27:26,008 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22791604676416)>', '<ExcThread(monitor, started 22791369017088)>']
[2026-03-04 05:27:31] 2026-03-04 04:27:26,448 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 05:27:31] 2026-03-04 04:27:26,449 | INFO     | [monitor] control thread has ended
[2026-03-04 05:27:31] 2026-03-04 04:27:31,034 | INFO     | all workflow threads have been joined
[2026-03-04 05:27:31] 2026-03-04 04:27:31,034 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 05:27:31] 2026-03-04 04:27:31,034 | INFO     | traces error code: 0
[2026-03-04 05:27:31] 2026-03-04 04:27:31,035 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 05:27:31] 2026-03-04 04:27:31,193 [wrapper] ==== pilot stdout END ====
[2026-03-04 05:27:31] 2026-03-04 04:27:31,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 05:27:31] 2026-03-04 04:27:31,200 [wrapper] pilotpid: 1475498
[2026-03-04 05:27:31] 2026-03-04 04:27:31,204 [wrapper] Pilot exit status: 0
[2026-03-04 05:27:31] 2026-03-04 04:27:31,218 [wrapper] pandaids: 7036250411
[2026-03-04 05:27:31] 2026-03-04 04:27:31,366 [wrapper] cleanup supervisor_pilot 1627669 1475499
[2026-03-04 05:27:31] 2026-03-04 04:27:31,370 [wrapper] Test setup, not cleaning
[2026-03-04 05:27:31] 2026-03-04 04:27:31,374 [wrapper] apfmon messages muted
[2026-03-04 05:27:31] 2026-03-04 04:27:31,378 [wrapper] ==== wrapper stdout END ====
[2026-03-04 05:27:31] 2026-03-04 04:27:31,381 [wrapper] ==== wrapper stderr END ====
[2026-03-04 05:27:31]  *** Error codes and diagnostics ***
[2026-03-04 05:27:31]     "exeErrorCode": 0,
[2026-03-04 05:27:31]     "exeErrorDiag": "",
[2026-03-04 05:27:31]     "pilotErrorCode": 0,
[2026-03-04 05:27:31]     "pilotErrorDiag": "",
[2026-03-04 05:27:31]  *** Listing of results directory ***
[2026-03-04 05:27:31] total 341028
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc      5111 Mar  3 10:01 queuedata.json
[2026-03-04 05:27:31] -rwx------ 1 boinc boinc     36322 Mar  3 10:01 runpilot2-wrapper.sh
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc       100 Mar  4 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 05:27:31] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 03:49 run_atlas
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc       105 Mar  4 03:49 job.xml
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc      6697 Mar  4 03:49 init_data.xml
[2026-03-04 05:27:31] -rw-r--r-- 2 boinc boinc 193840358 Mar  4 03:49 EVNT.48700944._000113.pool.root.1
[2026-03-04 05:27:31] -rw-r--r-- 2 boinc boinc     15845 Mar  4 03:49 start_atlas.sh
[2026-03-04 05:27:31] drwxrwx--x 2 boinc boinc      4096 Mar  4 03:49 shared
[2026-03-04 05:27:31] -rw-r--r-- 2 boinc boinc    597932 Mar  4 03:49 input.tar.gz
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc         0 Mar  4 03:49 boinc_lockfile
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc      2500 Mar  4 03:49 pandaJob.out
[2026-03-04 05:27:31] -rw------- 1 boinc boinc    998484 Mar  4 03:50 agis_schedconf.cvmfs.json
[2026-03-04 05:27:31] -rw------- 1 boinc boinc   1516092 Mar  4 03:50 agis_ddmendpoints.agis.ALL.json
[2026-03-04 05:27:31] -rw------- 1 boinc boinc       440 Mar  4 03:50 workernode_map.json
[2026-03-04 05:27:31] drwx------ 5 boinc boinc      4096 Mar  4 03:50 pilot3
[2026-03-04 05:27:31] -rw------- 1 boinc boinc 149222701 Mar  4 05:26 HITS.48700946._002906.pool.root.1
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc       529 Mar  4 05:26 boinc_task_state.xml
[2026-03-04 05:27:31] -rw------- 1 boinc boinc      1026 Mar  4 05:26 memory_monitor_summary.json
[2026-03-04 05:27:31] -rw------- 1 boinc boinc        95 Mar  4 05:26 pilot_heartbeat.json
[2026-03-04 05:27:31] -rw------- 1 boinc boinc    278039 Mar  4 05:26 log.48700946._002906.job.log.tgz.1
[2026-03-04 05:27:31] -rw------- 1 boinc boinc      6342 Mar  4 05:26 heartbeat.json
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc      8192 Mar  4 05:27 boinc_mmap_file
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc        27 Mar  4 05:27 wrapper_checkpoint.txt
[2026-03-04 05:27:31] -rw------- 1 boinc boinc      4831 Mar  4 05:27 pilotlog.txt
[2026-03-04 05:27:31] -rw------- 1 boinc boinc    827965 Mar  4 05:27 log.48700946._002906.job.log.1
[2026-03-04 05:27:31] -rw------- 1 boinc boinc       357 Mar  4 05:27 output.list
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc       620 Mar  4 05:27 runtime_log
[2026-03-04 05:27:31] -rw------- 1 boinc boinc   1126400 Mar  4 05:27 result.tar.gz
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc      9204 Mar  4 05:27 runtime_log.err
[2026-03-04 05:27:31] -rw------- 1 boinc boinc       662 Mar  4 05:27 HVqMDmUoaH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmFGLDmTHbAqm.diag
[2026-03-04 05:27:31] -rw-r--r-- 1 boinc boinc     21093 Mar  4 05:27 stderr.txt
[2026-03-04 05:27:31] HITS file was successfully produced:
[2026-03-04 05:27:31] -rw------- 1 boinc boinc 149222701 Mar  4 05:26 shared/HITS.pool.root.1
[2026-03-04 05:27:31]  *** Contents of shared directory: ***
[2026-03-04 05:27:31] total 336736
[2026-03-04 05:27:31] -rw-r--r-- 2 boinc boinc 193840358 Mar  4 03:49 ATLAS.root_0
[2026-03-04 05:27:31] -rw-r--r-- 2 boinc boinc     15845 Mar  4 03:49 start_atlas.sh
[2026-03-04 05:27:31] -rw-r--r-- 2 boinc boinc    597932 Mar  4 03:49 input.tar.gz
[2026-03-04 05:27:31] -rw------- 1 boinc boinc 149222701 Mar  4 05:26 HITS.pool.root.1
[2026-03-04 05:27:31] -rw------- 1 boinc boinc   1126400 Mar  4 05:27 result.tar.gz
05:27:32 (1470644): run_atlas exited; CPU time 22215.472373
05:27:32 (1470644): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN