Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:19:42 (3009783): wrapper (7.7.26015): starting
09:19:42 (3009783): wrapper: running run_atlas (--nthreads 10)
[2026-03-03 09:19:42] Arguments: --nthreads 10
[2026-03-03 09:19:42] Threads: 10
[2026-03-03 09:19:42] Checking for CVMFS
[2026-03-03 09:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-03 09:19:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-03 09:19:43] Running cvmfs_config stat atlas.cern.ch
[2026-03-03 09:19:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-03 09:19:45] 2.13.3.0 8127 21299 228352 156847 2 347 40526454 40960001 44476 16776704 0 153783667 99.710 117059515 40219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-03 09:19:45] CVMFS is ok
[2026-03-03 09:19:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-03 09:19:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-03 09:19:45] Further information can be found at the LHC@home message board.
[2026-03-03 09:19:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-03 09:19:45] Checking for apptainer binary...
[2026-03-03 09:19:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-03 09:19:45] Running /usr/bin/apptainer --version
[2026-03-03 09:19:45] apptainer version 1.4.5-2.el9
[2026-03-03 09:19:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-03 09:19:45] c8-6-11.aglt2.org
[2026-03-03 09:19:45] apptainer works
[2026-03-03 09:19:45] Set ATHENA_PROC_NUMBER=10
[2026-03-03 09:19:45] Set ATHENA_CORE_NUMBER=10
[2026-03-03 09:19:45] Starting ATLAS job with PandaID=7036254122
[2026-03-03 09:19:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-03 10:56:28]  *** The last 200 lines of the pilot log: ***
[2026-03-03 10:56:28]  is_altstaged=None
[2026-03-03 10:56:28]  is_tar=False
[2026-03-03 10:56:28]  lfn=log.48838605._002433.job.log.tgz.1
[2026-03-03 10:56:28]  mtime=0
[2026-03-03 10:56:28]  protocol_id=None
[2026-03-03 10:56:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-03 10:56:28]  replicas=None
[2026-03-03 10:56:28]  scope=mc23_13p6TeV
[2026-03-03 10:56:28]  status=None
[2026-03-03 10:56:28]  status_code=0
[2026-03-03 10:56:28]  storage_token=
[2026-03-03 10:56:28]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-7036254122/log.48838605._002433.job.log.tgz.1
[2026-03-03 10:56:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/21/log.48838605._002433.job.log.tgz.1
[2026-03-03 10:56:28]  workdir=None
[2026-03-03 10:56:28] ]
[2026-03-03 10:56:28] 2026-03-03 15:55:42,085 | INFO     | transferring file log.48838605._002433.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-7036254122/log.48838605._002433.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-03 10:56:28] 2026-03-03 15:55:42,085 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-7036254122/log.48838605._002433.job.log.tgz.1 /tmp/boinchome/slots/3/log.48838605._002433.job
[2026-03-03 10:56:28] 2026-03-03 15:55:42,288 | INFO     | adding to output.list: log.48838605._002433.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d2/21/log.48838605._002433.job.log.tg
[2026-03-03 10:56:28] 2026-03-03 15:55:42,289 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-03 10:56:28] 2026-03-03 15:55:42,289 | INFO     | summary of transferred files:
[2026-03-03 10:56:28] 2026-03-03 15:55:42,289 | INFO     |  -- lfn=log.48838605._002433.job.log.tgz.1, status_code=0, status=transferred
[2026-03-03 10:56:28] 2026-03-03 15:55:42,289 | INFO     | stage-out finished correctly
[2026-03-03 10:56:28] 2026-03-03 15:55:43,116 | INFO     | time since job start (5611s) is within the limit (349056.0s)
[2026-03-03 10:56:28] 2026-03-03 15:55:44,170 | INFO     | monitor loop #348: job 0:7036254122 is in state 'finished'
[2026-03-03 10:56:28] 2026-03-03 15:55:44,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 10:56:28] 2026-03-03 15:55:45,132 | INFO     | time since job start (5613s) is within the limit (349056.0s)
[2026-03-03 10:56:28] 2026-03-03 15:55:45,200 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-03 10:56:28] 2026-03-03 15:55:46,769 | INFO     | monitor loop #349: job 0:7036254122 is in state 'finished'
[2026-03-03 10:56:28] 2026-03-03 15:55:46,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,128 | INFO     | job 7036254122 has state=finished
[2026-03-03 10:56:28] 2026-03-03 15:55:47,128 | INFO     | preparing for final server update for job 7036254122 in state='finished'
[2026-03-03 10:56:28] 2026-03-03 15:55:47,139 | INFO     | time since job start (5615s) is within the limit (349056.0s)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,323 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,324 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7036254122/jobReport.json
[2026-03-03 10:56:28] 2026-03-03 15:55:47,325 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-03-03 10:56:28] 2026-03-03 15:55:47,325 | INFO     | this job has now completed (state=finished)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,325 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,325 | INFO     | log transfer has been attempted: DONE
[2026-03-03 10:56:28] 2026-03-03 15:55:47,325 | INFO     | job 7036254122 has finished - writing final server update
[2026-03-03 10:56:28] 2026-03-03 15:55:47,326 | INFO     | total number of processed events: 400 (read)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,356 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7036254122/memory_monitor_summary.json (trf name=prmon)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,357 | INFO     | extracted standard info from prmon json
[2026-03-03 10:56:28] 2026-03-03 15:55:47,357 | INFO     | extracted standard memory fields from prmon json
[2026-03-03 10:56:28] 2026-03-03 15:55:47,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-03 10:56:28] 2026-03-03 15:55:47,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-03 10:56:28] 2026-03-03 15:55:47,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-03 10:56:28] 2026-03-03 15:55:47,358 | INFO     | fitting pss+swap vs Time
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | sum of square deviations: 177263211.54216847
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | sum of deviations: -11615996470.493977
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | mean x: 1772550655.1325302
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | mean y: 2723222.5903614457
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | intersect: 116157349863.17334
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | chi2: 0.07820636587133903
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | current memory leak: -65.53 B/s (using 83 data points, chi2=0.08)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,359 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | ..............................
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . Timing measurements:
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . get job = 0 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . initial setup = 53 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . payload setup = 60 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . stage-in = 0 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . payload execution = 5536 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . stage-out = 3 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | . log creation = 0 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,360 | INFO     | ..............................
[2026-03-03 10:56:28] 2026-03-03 15:55:47,499 | INFO     | 
[2026-03-03 10:56:28] 2026-03-03 15:55:47,499 | INFO     | job summary report
[2026-03-03 10:56:28] 2026-03-03 15:55:47,499 | INFO     | --------------------------------------------------
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | PanDA job id: 7036254122
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | task id: 48838605
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | errors: (none)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | pilot state: finished 
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | transexitcode: 0
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | exeerrorcode: 0
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | exeerrordiag: 
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | exitcode: 0
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | exitmsg: OK
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | cpuconsumptiontime: 25469 s
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | nevents: 400
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | neventsw: 0
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | pid: 3039589
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | pgrp: 3039589
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | corecount: 10
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | event service: False
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | sizes: {0: 2286534, 1: 2286991, 2: 2287079, 5602: 2313611, 5608: 2322609, 5611: 2322665, 5613: 2322987}
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | --------------------------------------------------
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | 
[2026-03-03 10:56:28] 2026-03-03 15:55:47,500 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-03-03 10:56:28] 2026-03-03 15:55:47,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,594 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-03 10:56:28] 2026-03-03 15:55:47,595 | INFO     | job 7036254122 has completed (purged errors)
[2026-03-03 10:56:28] 2026-03-03 15:55:47,595 | INFO     | overall cleanup function is called
[2026-03-03 10:56:28] 2026-03-03 15:55:48,606 | INFO     | --- collectZombieJob: --- 10, [3039589]
[2026-03-03 10:56:28] 2026-03-03 15:55:48,606 | INFO     | zombie collector waiting for pid 3039589
[2026-03-03 10:56:28] 2026-03-03 15:55:48,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-03 10:56:28] 2026-03-03 15:55:48,606 | INFO     | collected zombie processes
[2026-03-03 10:56:28] 2026-03-03 15:55:48,606 | INFO     | will attempt to kill all subprocesses of pid=3039589
[2026-03-03 10:56:28] 2026-03-03 15:55:53,659 | INFO     | process IDs to be killed: [3039589] (in reverse order)
[2026-03-03 10:56:28] 2026-03-03 15:55:53,961 | WARNING  | found no corresponding commands to process id(s)
[2026-03-03 10:56:28] 2026-03-03 15:55:53,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-03 10:56:28] 2026-03-03 15:55:54,136 | INFO     | did not find any defunct processes belonging to 3039589
[2026-03-03 10:56:28] 2026-03-03 15:55:54,305 | INFO     | did not find any defunct processes belonging to 3039589
[2026-03-03 10:56:28] 2026-03-03 15:55:54,306 | INFO     | ready for new job
[2026-03-03 10:56:28] 2026-03-03 15:55:54,306 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-03 10:56:28] 2026-03-03 15:55:54,323 | INFO     | **************************************
[2026-03-03 10:56:28] 2026-03-03 15:55:54,323 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-03 10:56:28] 2026-03-03 15:55:54,323 | INFO     | **************************************
[2026-03-03 10:56:28] 2026-03-03 15:55:54,323 | INFO     | 
[2026-03-03 10:56:28] 2026-03-03 15:55:54,353 | INFO     | architecture information:
[2026-03-03 10:56:28] 2026-03-03 15:55:54,357 | INFO     | executing command: cat /etc/os-release
[2026-03-03 10:56:28] 2026-03-03 15:55:54,433 | INFO     | cat /etc/os-release:
[2026-03-03 10:56:28] NAME="CentOS Linux"
[2026-03-03 10:56:28] VERSION="7 (Core)"
[2026-03-03 10:56:28] ID="centos"
[2026-03-03 10:56:28] ID_LIKE="rhel fedora"
[2026-03-03 10:56:28] VERSION_ID="7"
[2026-03-03 10:56:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-03 10:56:28] ANSI_COLOR="0;31"
[2026-03-03 10:56:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-03 10:56:28] HOME_URL="https://www.centos.org/"
[2026-03-03 10:56:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-03 10:56:28] 
[2026-03-03 10:56:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-03 10:56:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-03 10:56:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-03 10:56:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-03 10:56:28] 
[2026-03-03 10:56:28] 2026-03-03 15:55:54,434 | INFO     | **************************************
[2026-03-03 10:56:28] 2026-03-03 15:55:54,938 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-03-03 10:56:28] 2026-03-03 15:55:55,026 | INFO     | sufficient remaining disk space (169438347264 B)
[2026-03-03 10:56:28] 2026-03-03 15:55:55,027 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-03 10:56:28] 2026-03-03 15:55:55,027 | INFO     | current server update state: UPDATING_FINAL
[2026-03-03 10:56:28] 2026-03-03 15:55:55,027 | INFO     | update_server=False
[2026-03-03 10:56:28] 2026-03-03 15:55:55,027 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-03 10:56:28] 2026-03-03 15:55:55,222 | INFO     | all job control threads have been joined
[2026-03-03 10:56:28] 2026-03-03 15:55:55,504 | INFO     | all data control threads have been joined
[2026-03-03 10:56:28] 2026-03-03 15:55:55,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-03 10:56:28] 2026-03-03 15:55:55,540 | INFO     | aborting loop
[2026-03-03 10:56:28] 2026-03-03 15:55:55,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-03 10:56:28] 2026-03-03 15:55:56,033 | INFO     | [job] retrieve thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,213 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-03 10:56:28] 2026-03-03 15:55:56,228 | INFO     | [job] control thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,271 | INFO     | [data] copytool_in thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,304 | INFO     | [payload] validate_pre thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,352 | INFO     | all payload control threads have been joined
[2026-03-03 10:56:28] 2026-03-03 15:55:56,514 | INFO     | [data] control thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,539 | INFO     | [payload] validate_post thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,557 | INFO     | [job] job monitor thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-03 10:56:28] 2026-03-03 15:55:56,764 | INFO     | [job] create_data_payload thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:56,861 | INFO     | [job] validate thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:57,100 | INFO     | [payload] failed_post thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:57,370 | INFO     | [payload] control thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:57,493 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:57,513 | INFO     | [payload] execute_payloads thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:57,702 | INFO     | [data] copytool_out thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:55:57,739 | INFO     | [job] queue monitor thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:56:00,266 | INFO     | [data] queue_monitor thread has finished
[2026-03-03 10:56:28] 2026-03-03 15:56:21,011 | INFO     | [monitor] cgroup control has ended
[2026-03-03 10:56:28] 2026-03-03 15:56:21,401 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140192119576384)>', '<ExcThread(monitor, started 140191717107456)>']
[2026-03-03 10:56:28] 2026-03-03 15:56:21,912 | INFO     | PID=3023770 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-03 10:56:28] 2026-03-03 15:56:21,912 | INFO     | .. there are 57 such processes running
[2026-03-03 10:56:28] 2026-03-03 15:56:21,912 | INFO     | found 0 job(s) in 20 queues
[2026-03-03 10:56:28] 2026-03-03 15:56:21,912 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-03 10:56:28] 2026-03-03 15:56:21,912 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-03 10:56:28] 2026-03-03 15:56:21,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-03 10:56:28] 2026-03-03 15:56:21,912 | INFO     | [monitor] control thread has ended
[2026-03-03 10:56:28] 2026-03-03 15:56:26,426 | INFO     | all workflow threads have been joined
[2026-03-03 10:56:28] 2026-03-03 15:56:26,426 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-03 10:56:28] 2026-03-03 15:56:26,426 | INFO     | traces error code: 0
[2026-03-03 10:56:28] 2026-03-03 15:56:26,427 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-03 10:56:28] 2026-03-03 15:56:26,828 [wrapper] ==== pilot stdout END ====
[2026-03-03 10:56:28] 2026-03-03 15:56:26,836 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-03 10:56:28] 2026-03-03 15:56:26,847 [wrapper] pilotpid: 3023770
[2026-03-03 10:56:28] 2026-03-03 15:56:26,861 [wrapper] Pilot exit status: 0
[2026-03-03 10:56:28] 2026-03-03 15:56:26,979 [wrapper] pandaids: 7036254122
[2026-03-03 10:56:28] 2026-03-03 15:56:28,027 [wrapper] cleanup supervisor_pilot 3731291 3023771
[2026-03-03 10:56:28] 2026-03-03 15:56:28,042 [wrapper] Test setup, not cleaning
[2026-03-03 10:56:28] 2026-03-03 15:56:28,051 [wrapper] apfmon messages muted
[2026-03-03 10:56:28] 2026-03-03 15:56:28,088 [wrapper] ==== wrapper stdout END ====
[2026-03-03 10:56:28] 2026-03-03 15:56:28,124 [wrapper] ==== wrapper stderr END ====
[2026-03-03 10:56:28]  *** Error codes and diagnostics ***
[2026-03-03 10:56:28]     "exeErrorCode": 0,
[2026-03-03 10:56:28]     "exeErrorDiag": "",
[2026-03-03 10:56:28]     "pilotErrorCode": 0,
[2026-03-03 10:56:28]     "pilotErrorDiag": "",
[2026-03-03 10:56:28]  *** Listing of results directory ***
[2026-03-03 10:56:28] total 495988
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas    584627 Mar  3 03:25 pilot3.tar.gz
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas      5111 Mar  3 04:01 queuedata.json
[2026-03-03 10:56:28] -rwx------. 1 boincer umatlas     36322 Mar  3 04:01 runpilot2-wrapper.sh
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas       100 Mar  3 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-03 10:56:28] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  3 09:19 run_atlas
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas       105 Mar  3 09:19 job.xml
[2026-03-03 10:56:28] -rw-r--r--. 2 boincer umatlas 285329237 Mar  3 09:19 EVNT.48343768._000093.pool.root.1
[2026-03-03 10:56:28] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 09:19 start_atlas.sh
[2026-03-03 10:56:28] drwxrwx--x. 2 boincer umatlas      4096 Mar  3 09:19 shared
[2026-03-03 10:56:28] -rw-r--r--. 2 boincer umatlas    597952 Mar  3 09:19 input.tar.gz
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas         0 Mar  3 09:19 boinc_lockfile
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas      2563 Mar  3 09:19 pandaJob.out
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas        57 Mar  3 09:19 setup.sh.local
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas    998442 Mar  3 09:21 agis_schedconf.cvmfs.json
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas   1516104 Mar  3 09:21 agis_ddmendpoints.agis.ALL.json
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas       430 Mar  3 09:22 workernode_map.json
[2026-03-03 10:56:28] drwx------. 5 boincer umatlas      4096 Mar  3 09:22 pilot3
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas      7183 Mar  3 10:54 init_data.xml
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas 216449781 Mar  3 10:54 HITS.48838605._002433.pool.root.1
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas       530 Mar  3 10:54 boinc_task_state.xml
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas      1033 Mar  3 10:55 memory_monitor_summary.json
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas    359631 Mar  3 10:55 log.48838605._002433.job.log.tgz.1
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas        95 Mar  3 10:55 pilot_heartbeat.json
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas      6334 Mar  3 10:55 heartbeat.json
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas        27 Mar  3 10:56 wrapper_checkpoint.txt
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas      8192 Mar  3 10:56 boinc_mmap_file
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas      4821 Mar  3 10:56 pilotlog.txt
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas    728166 Mar  3 10:56 log.48838605._002433.job.log.1
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas       357 Mar  3 10:56 output.list
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas       620 Mar  3 10:56 runtime_log
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas   1105920 Mar  3 10:56 result.tar.gz
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas      9338 Mar  3 10:56 runtime_log.err
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas       655 Mar  3 10:56 bvaKDmRoaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmi6DLDm8r4PSm.diag
[2026-03-03 10:56:28] -rw-r--r--. 1 boincer umatlas     21535 Mar  3 10:56 stderr.txt
[2026-03-03 10:56:28] HITS file was successfully produced:
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas 216449781 Mar  3 10:54 shared/HITS.pool.root.1
[2026-03-03 10:56:28]  *** Contents of shared directory: ***
[2026-03-03 10:56:28] total 491712
[2026-03-03 10:56:28] -rw-r--r--. 2 boincer umatlas 285329237 Mar  3 09:19 ATLAS.root_0
[2026-03-03 10:56:28] -rw-r--r--. 2 boincer umatlas     15845 Mar  3 09:19 start_atlas.sh
[2026-03-03 10:56:28] -rw-r--r--. 2 boincer umatlas    597952 Mar  3 09:19 input.tar.gz
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas 216449781 Mar  3 10:54 HITS.pool.root.1
[2026-03-03 10:56:28] -rw-------. 1 boincer umatlas   1105920 Mar  3 10:56 result.tar.gz
10:56:30 (3009783): run_atlas exited; CPU time 25703.911760
10:56:30 (3009783): called boinc_finish(0)

</stderr_txt>
]]>

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