Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:45:28 (1996556): wrapper (7.7.26015): starting
06:45:28 (1996556): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 06:45:28] Arguments: --nthreads 4
[2026-03-04 06:45:28] Threads: 4
[2026-03-04 06:45:28] Checking for CVMFS
[2026-03-04 06:45:28] No cvmfs_config command found, will try listing directly
[2026-03-04 06:45:28] CVMFS is ok
[2026-03-04 06:45:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 06:45:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 06:45:28] Further information can be found at the LHC@home message board.
[2026-03-04 06:45:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 06:45:28] Checking for apptainer binary...
[2026-03-04 06:45:28] which: no apptainer in ((null))
[2026-03-04 06:45:28] apptainer is not installed, using version from CVMFS
[2026-03-04 06:45:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 06:45:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2026-03-04 06:45:28] apptainer works
[2026-03-04 06:45:28] Set ATHENA_PROC_NUMBER=4
[2026-03-04 06:45:28] Set ATHENA_CORE_NUMBER=4
[2026-03-04 06:45:28] Starting ATLAS job with PandaID=7036223544
[2026-03-04 06:45:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 09:54:08]  *** The last 200 lines of the pilot log: ***
[2026-03-04 09:54:08] 2026-03-04 08:53:08,781 | INFO     | preparing for final server update for job 7036223544 in state='finished'
[2026-03-04 09:54:08] 2026-03-04 08:53:08,781 | INFO     | reading metadata from: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7036223544/jobReport.json
[2026-03-04 09:54:08] 2026-03-04 08:53:08,784 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot28/slots/0/workernode_map.json
[2026-03-04 09:54:08] 2026-03-04 08:53:08,784 | INFO     | this job has now completed (state=finished)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,784 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,784 | INFO     | log transfer has been attempted: DONE
[2026-03-04 09:54:08] 2026-03-04 08:53:08,785 | INFO     | job 7036223544 has finished - writing final server update
[2026-03-04 09:54:08] 2026-03-04 08:53:08,785 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1720862/.job.ad'
[2026-03-04 09:54:08] 2026-03-04 08:53:08,785 | INFO     | total number of processed events: 400 (read)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,791 | INFO     | time since job start (11244s) is within the limit (349056.0s)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,797 | INFO     | using path: /scratch/boinc/var/slot28/slots/0/PanDA_Pilot-7036223544/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,797 | INFO     | extracted standard info from prmon json
[2026-03-04 09:54:08] 2026-03-04 08:53:08,798 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 09:54:08] 2026-03-04 08:53:08,798 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 09:54:08] 2026-03-04 08:53:08,798 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 09:54:08] 2026-03-04 08:53:08,798 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 09:54:08] 2026-03-04 08:53:08,801 | INFO     | fitting pss+swap vs Time
[2026-03-04 09:54:08] 2026-03-04 08:53:08,802 | INFO     | sum of square deviations: 1931608310.0
[2026-03-04 09:54:08] 2026-03-04 08:53:08,803 | INFO     | sum of deviations: 15454749031.499998
[2026-03-04 09:54:08] 2026-03-04 08:53:08,803 | INFO     | mean x: 1772608747.5
[2026-03-04 09:54:08] 2026-03-04 08:53:08,803 | INFO     | mean y: 2327643.2336956523
[2026-03-04 09:54:08] 2026-03-04 08:53:08,803 | INFO     | intersect: -14180269926.795422
[2026-03-04 09:54:08] 2026-03-04 08:53:08,804 | INFO     | chi2: 1.343788528442993
[2026-03-04 09:54:08] 2026-03-04 08:53:08,804 | INFO     | sum of square deviations: 1778377530.0
[2026-03-04 09:54:08] 2026-03-04 08:53:08,805 | INFO     | sum of deviations: 14945203557.0
[2026-03-04 09:54:08] 2026-03-04 08:53:08,805 | INFO     | mean x: 1772608595.0
[2026-03-04 09:54:08] 2026-03-04 08:53:08,805 | INFO     | mean y: 2327135.994413408
[2026-03-04 09:54:08] 2026-03-04 08:53:08,805 | INFO     | intersect: -14894395203.475752
[2026-03-04 09:54:08] 2026-03-04 08:53:08,805 | INFO     | chi2: 1.3447635602959116
[2026-03-04 09:54:08] 2026-03-04 08:53:08,806 | INFO     | current chi2=1.3447635602959116 (change=-0.0725584295654343 %)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,806 | INFO     | right removable region: 178
[2026-03-04 09:54:08] 2026-03-04 08:53:08,806 | INFO     | sum of square deviations: 1778377530.0
[2026-03-04 09:54:08] 2026-03-04 08:53:08,807 | INFO     | sum of deviations: -7658885622.000003
[2026-03-04 09:54:08] 2026-03-04 08:53:08,807 | INFO     | mean x: 1772608900.0
[2026-03-04 09:54:08] 2026-03-04 08:53:08,807 | INFO     | mean y: 2350320.865921788
[2026-03-04 09:54:08] 2026-03-04 08:53:08,807 | INFO     | intersect: 7636392355.595881
[2026-03-04 09:54:08] 2026-03-04 08:53:08,808 | INFO     | chi2: 0.03526771269382721
[2026-03-04 09:54:08] 2026-03-04 08:53:08,808 | INFO     | current chi2=0.03526771269382721 (change=97.37550128257972 %)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,808 | INFO     | sum of square deviations: 1633472487.5
[2026-03-04 09:54:08] 2026-03-04 08:53:08,809 | INFO     | sum of deviations: -6598959229.500001
[2026-03-04 09:54:08] 2026-03-04 08:53:08,809 | INFO     | mean x: 1772609052.5
[2026-03-04 09:54:08] 2026-03-04 08:53:08,809 | INFO     | mean y: 2349183.603448276
[2026-03-04 09:54:08] 2026-03-04 08:53:08,809 | INFO     | intersect: 7163397169.904551
[2026-03-04 09:54:08] 2026-03-04 08:53:08,810 | INFO     | chi2: 0.031997593770221405
[2026-03-04 09:54:08] 2026-03-04 08:53:08,810 | INFO     | current chi2=0.031997593770221405 (change=9.272273912388322 %)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,810 | INFO     | left removable region: 20
[2026-03-04 09:54:08] 2026-03-04 08:53:08,810 | INFO     | sum of square deviations: 1223016419.5
[2026-03-04 09:54:08] 2026-03-04 08:53:08,811 | INFO     | sum of deviations: -1474852845.5
[2026-03-04 09:54:08] 2026-03-04 08:53:08,811 | INFO     | mean x: 1772609174.5
[2026-03-04 09:54:08] 2026-03-04 08:53:08,811 | INFO     | mean y: 2343093.7911392404
[2026-03-04 09:54:08] 2026-03-04 08:53:08,811 | INFO     | intersect: 2139957637.0525763
[2026-03-04 09:54:08] 2026-03-04 08:53:08,811 | INFO     | chi2: 0.018280945160372614
[2026-03-04 09:54:08] 2026-03-04 08:53:08,812 | INFO     | current memory leak: -1.21 B/s (using 158 data points, chi2=0.02)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,812 | INFO     | could have reported an average CPU frequency of 2724 MHz (10 samples)
[2026-03-04 09:54:08] 2026-03-04 08:53:08,812 | INFO     | ..............................
[2026-03-04 09:54:08] 2026-03-04 08:53:08,812 | INFO     | . Timing measurements:
[2026-03-04 09:54:08] 2026-03-04 08:53:08,812 | INFO     | . get job = 0 s
[2026-03-04 09:54:08] 2026-03-04 08:53:08,812 | INFO     | . initial setup = 5 s
[2026-03-04 09:54:08] 2026-03-04 08:53:08,812 | INFO     | . payload setup = 5 s
[2026-03-04 09:54:08] 2026-03-04 08:53:08,813 | INFO     | . stage-in = 0 s
[2026-03-04 09:54:08] 2026-03-04 08:53:08,813 | INFO     | . payload execution = 11219 s
[2026-03-04 09:54:08] 2026-03-04 08:53:08,813 | INFO     | . stage-out = 1 s
[2026-03-04 09:54:08] 2026-03-04 08:53:08,813 | INFO     | . log creation = 0 s
[2026-03-04 09:54:08] 2026-03-04 08:53:08,813 | INFO     | ..............................
[2026-03-04 09:54:08] 2026-03-04 08:53:09,179 | INFO     | 
[2026-03-04 09:54:08] 2026-03-04 08:53:09,179 | INFO     | job summary report
[2026-03-04 09:54:08] 2026-03-04 08:53:09,179 | INFO     | --------------------------------------------------
[2026-03-04 09:54:08] 2026-03-04 08:53:09,179 | INFO     | PanDA job id: 7036223544
[2026-03-04 09:54:08] 2026-03-04 08:53:09,179 | INFO     | task id: 48878057
[2026-03-04 09:54:08] 2026-03-04 08:53:09,179 | INFO     | errors: (none)
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | pilot state: finished 
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | transexitcode: 0
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | exeerrorcode: 0
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | exeerrordiag: 
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | exitcode: 0
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | exitmsg: OK
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | cpuconsumptiontime: 43305 s
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | nevents: 400
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | neventsw: 0
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | pid: 2005574
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | pgrp: 2005574
[2026-03-04 09:54:08] 2026-03-04 08:53:09,180 | INFO     | corecount: 4
[2026-03-04 09:54:08] 2026-03-04 08:53:09,181 | INFO     | event service: False
[2026-03-04 09:54:08] 2026-03-04 08:53:09,181 | INFO     | sizes: {0: 2286013, 1: 2287142, 12: 2287142, 11228: 2316517, 11230: 2325593, 11233: 2325731}
[2026-03-04 09:54:08] 2026-03-04 08:53:09,181 | INFO     | --------------------------------------------------
[2026-03-04 09:54:08] 2026-03-04 08:53:09,181 | INFO     | 
[2026-03-04 09:54:08] 2026-03-04 08:53:09,181 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2026-03-04 09:54:08] 2026-03-04 08:53:09,200 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,201 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,201 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,201 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,202 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 09:54:08] 2026-03-04 08:53:09,203 | INFO     | job 7036223544 has completed (purged errors)
[2026-03-04 09:54:08] 2026-03-04 08:53:09,203 | INFO     | overall cleanup function is called
[2026-03-04 09:54:08] 2026-03-04 08:53:10,211 | INFO     | --- collectZombieJob: --- 10, [2005574]
[2026-03-04 09:54:08] 2026-03-04 08:53:10,211 | INFO     | zombie collector waiting for pid 2005574
[2026-03-04 09:54:08] 2026-03-04 08:53:10,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 09:54:08] 2026-03-04 08:53:10,211 | INFO     | collected zombie processes
[2026-03-04 09:54:08] 2026-03-04 08:53:10,212 | INFO     | will attempt to kill all subprocesses of pid=2005574
[2026-03-04 09:54:08] 2026-03-04 08:53:10,498 | INFO     | process IDs to be killed: [2005574] (in reverse order)
[2026-03-04 09:54:08] 2026-03-04 08:53:10,594 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 09:54:08] 2026-03-04 08:53:10,595 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 09:54:08] 2026-03-04 08:53:10,604 | INFO     | did not find any defunct processes belonging to 2005574
[2026-03-04 09:54:08] 2026-03-04 08:53:10,612 | INFO     | did not find any defunct processes belonging to 2005574
[2026-03-04 09:54:08] 2026-03-04 08:53:10,612 | INFO     | ready for new job
[2026-03-04 09:54:08] 2026-03-04 08:53:10,612 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 09:54:08] 2026-03-04 08:53:10,614 | INFO     | **************************************
[2026-03-04 09:54:08] 2026-03-04 08:53:10,615 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 09:54:08] 2026-03-04 08:53:10,615 | INFO     | **************************************
[2026-03-04 09:54:08] 2026-03-04 08:53:10,615 | INFO     | 
[2026-03-04 09:54:08] 2026-03-04 08:53:10,618 | INFO     | architecture information:
[2026-03-04 09:54:08] 2026-03-04 08:53:10,619 | INFO     | executing command: cat /etc/os-release
[2026-03-04 09:54:08] 2026-03-04 08:53:10,635 | INFO     | cat /etc/os-release:
[2026-03-04 09:54:08] NAME="CentOS Linux"
[2026-03-04 09:54:08] VERSION="7 (Core)"
[2026-03-04 09:54:08] ID="centos"
[2026-03-04 09:54:08] ID_LIKE="rhel fedora"
[2026-03-04 09:54:08] VERSION_ID="7"
[2026-03-04 09:54:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 09:54:08] ANSI_COLOR="0;31"
[2026-03-04 09:54:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 09:54:08] HOME_URL="https://www.centos.org/"
[2026-03-04 09:54:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 09:54:08] 
[2026-03-04 09:54:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 09:54:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 09:54:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 09:54:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 09:54:08] 
[2026-03-04 09:54:08] 2026-03-04 08:53:10,635 | INFO     | **************************************
[2026-03-04 09:54:08] 2026-03-04 08:53:11,138 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2026-03-04 09:54:08] 2026-03-04 08:53:11,153 | INFO     | sufficient remaining disk space (667654553600 B)
[2026-03-04 09:54:08] 2026-03-04 08:53:11,154 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 09:54:08] 2026-03-04 08:53:11,154 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 09:54:08] 2026-03-04 08:53:11,154 | INFO     | update_server=False
[2026-03-04 09:54:08] 2026-03-04 08:53:11,154 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 09:54:08] 2026-03-04 08:53:11,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:54:08] 2026-03-04 08:53:11,155 | INFO     | aborting loop
[2026-03-04 09:54:08] 2026-03-04 08:53:11,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 09:54:08] 2026-03-04 08:53:11,864 | INFO     | all payload control threads have been joined
[2026-03-04 09:54:08] 2026-03-04 08:53:12,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 09:54:08] 2026-03-04 08:53:12,115 | INFO     | all data control threads have been joined
[2026-03-04 09:54:08] 2026-03-04 08:53:12,159 | INFO     | [job] retrieve thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:12,160 | INFO     | [job] job monitor thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:12,292 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:12,515 | INFO     | all job control threads have been joined
[2026-03-04 09:54:08] 2026-03-04 08:53:12,686 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:12,689 | INFO     | [data] copytool_in thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:12,869 | INFO     | [payload] control thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,121 | INFO     | [data] control thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,300 | INFO     | [payload] validate_post thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,320 | INFO     | [job] validate thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,465 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,476 | INFO     | [data] copytool_out thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,512 | INFO     | [payload] failed_post thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,520 | INFO     | [job] control thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:13,910 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 09:54:08] 2026-03-04 08:53:14,916 | INFO     | [job] queue monitor thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:16,059 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:22,044 | INFO     | job.realtimelogging is not enabled
[2026-03-04 09:54:08] 2026-03-04 08:53:23,049 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 09:54:08] 2026-03-04 08:53:42,218 | INFO     | PID=2000694 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 09:54:08] 2026-03-04 08:53:42,218 | INFO     | .. there are 12 such processes running
[2026-03-04 09:54:08] 2026-03-04 08:53:42,219 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 09:54:08] 2026-03-04 08:53:42,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 09:54:08] 2026-03-04 08:53:42,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 09:54:08] 2026-03-04 08:54:00,907 | INFO     | [monitor] cgroup control has ended
[2026-03-04 09:54:08] 2026-03-04 08:54:02,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23119835592512)>', '<ExcThread(monitor, started 23119530010368)>']
[2026-03-04 09:54:08] 2026-03-04 08:54:03,317 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 09:54:08] 2026-03-04 08:54:03,317 | INFO     | [monitor] control thread has ended
[2026-03-04 09:54:08] 2026-03-04 08:54:07,848 | INFO     | all workflow threads have been joined
[2026-03-04 09:54:08] 2026-03-04 08:54:07,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 09:54:08] 2026-03-04 08:54:07,850 | INFO     | traces error code: 0
[2026-03-04 09:54:08] 2026-03-04 08:54:07,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 09:54:08] 2026-03-04 08:54:08,011 [wrapper] ==== pilot stdout END ====
[2026-03-04 09:54:08] 2026-03-04 08:54:08,014 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 09:54:08] 2026-03-04 08:54:08,016 [wrapper] pilotpid: 2000694
[2026-03-04 09:54:08] 2026-03-04 08:54:08,019 [wrapper] Pilot exit status: 0
[2026-03-04 09:54:08] 2026-03-04 08:54:08,029 [wrapper] pandaids: 7036223544
[2026-03-04 09:54:08] 2026-03-04 08:54:08,086 [wrapper] cleanup supervisor_pilot 2153045 2000695
[2026-03-04 09:54:08] 2026-03-04 08:54:08,089 [wrapper] Test setup, not cleaning
[2026-03-04 09:54:08] 2026-03-04 08:54:08,091 [wrapper] apfmon messages muted
[2026-03-04 09:54:08] 2026-03-04 08:54:08,094 [wrapper] ==== wrapper stdout END ====
[2026-03-04 09:54:08] 2026-03-04 08:54:08,097 [wrapper] ==== wrapper stderr END ====
[2026-03-04 09:54:08]  *** Error codes and diagnostics ***
[2026-03-04 09:54:08]     "exeErrorCode": 0,
[2026-03-04 09:54:08]     "exeErrorDiag": "",
[2026-03-04 09:54:08]     "pilotErrorCode": 0,
[2026-03-04 09:54:08]     "pilotErrorDiag": "",
[2026-03-04 09:54:08]  *** Listing of results directory ***
[2026-03-04 09:54:08] total 506428
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-04 09:54:08] -rwx------ 1 boinc boinc     36322 Mar  3 09:29 runpilot2-wrapper.sh
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc      5111 Mar  3 09:30 queuedata.json
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc       100 Mar  4 06:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 09:54:08] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 06:45 run_atlas
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc       105 Mar  4 06:45 job.xml
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc      6639 Mar  4 06:45 init_data.xml
[2026-03-04 09:54:08] -rw-r--r-- 2 boinc boinc 296980296 Mar  4 06:45 EVNT.48717157._000009.pool.root.1
[2026-03-04 09:54:08] -rw-r--r-- 2 boinc boinc     15845 Mar  4 06:45 start_atlas.sh
[2026-03-04 09:54:08] drwxrwx--x 2 boinc boinc      4096 Mar  4 06:45 shared
[2026-03-04 09:54:08] -rw-r--r-- 2 boinc boinc    597945 Mar  4 06:45 input.tar.gz
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc         0 Mar  4 06:45 boinc_lockfile
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc      2592 Mar  4 06:45 pandaJob.out
[2026-03-04 09:54:08] -rw------- 1 boinc boinc    997749 Mar  4 06:45 agis_schedconf.cvmfs.json
[2026-03-04 09:54:08] -rw------- 1 boinc boinc       447 Mar  4 06:45 workernode_map.json
[2026-03-04 09:54:08] drwx------ 5 boinc boinc      4096 Mar  4 06:45 pilot3
[2026-03-04 09:54:08] -rw------- 1 boinc boinc 213707605 Mar  4 09:52 HITS.48878057._000221.pool.root.1
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc       530 Mar  4 09:52 boinc_task_state.xml
[2026-03-04 09:54:08] -rw------- 1 boinc boinc      1045 Mar  4 09:53 memory_monitor_summary.json
[2026-03-04 09:54:08] -rw------- 1 boinc boinc   1516092 Mar  4 09:53 agis_ddmendpoints.agis.ALL.json
[2026-03-04 09:54:08] -rw------- 1 boinc boinc    374964 Mar  4 09:53 log.48878057._000221.job.log.tgz.1
[2026-03-04 09:54:08] -rw------- 1 boinc boinc      6402 Mar  4 09:53 heartbeat.json
[2026-03-04 09:54:08] -rw------- 1 boinc boinc        95 Mar  4 09:53 pilot_heartbeat.json
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc      8192 Mar  4 09:53 boinc_mmap_file
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc        28 Mar  4 09:53 wrapper_checkpoint.txt
[2026-03-04 09:54:08] -rw------- 1 boinc boinc      4902 Mar  4 09:54 pilotlog.txt
[2026-03-04 09:54:08] -rw------- 1 boinc boinc   1608588 Mar  4 09:54 log.48878057._000221.job.log.1
[2026-03-04 09:54:08] -rw------- 1 boinc boinc       357 Mar  4 09:54 output.list
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc       620 Mar  4 09:54 runtime_log
[2026-03-04 09:54:08] -rw------- 1 boinc boinc   1996800 Mar  4 09:54 result.tar.gz
[2026-03-04 09:54:08] -rw------- 1 boinc boinc       664 Mar  4 09:54 v7bNDm2IaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQ4DLDmx8xTmm.diag
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc      9205 Mar  4 09:54 runtime_log.err
[2026-03-04 09:54:08] -rw-r--r-- 1 boinc boinc     21124 Mar  4 09:54 stderr.txt
[2026-03-04 09:54:08] HITS file was successfully produced:
[2026-03-04 09:54:08] -rw------- 1 boinc boinc 213707605 Mar  4 09:52 shared/HITS.pool.root.1
[2026-03-04 09:54:08]  *** Contents of shared directory: ***
[2026-03-04 09:54:08] total 501280
[2026-03-04 09:54:08] -rw-r--r-- 2 boinc boinc 296980296 Mar  4 06:45 ATLAS.root_0
[2026-03-04 09:54:08] -rw-r--r-- 2 boinc boinc     15845 Mar  4 06:45 start_atlas.sh
[2026-03-04 09:54:08] -rw-r--r-- 2 boinc boinc    597945 Mar  4 06:45 input.tar.gz
[2026-03-04 09:54:08] -rw------- 1 boinc boinc 213707605 Mar  4 09:52 HITS.pool.root.1
[2026-03-04 09:54:08] -rw------- 1 boinc boinc   1996800 Mar  4 09:54 result.tar.gz
09:54:09 (1996556): run_atlas exited; CPU time 43719.551794
09:54:09 (1996556): called boinc_finish(0)

</stderr_txt>
]]>

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