Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:53:29 (3172001): wrapper (7.7.26015): starting
00:53:29 (3172001): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 00:53:29] Arguments: --nthreads 4
[2026-03-04 00:53:29] Threads: 4
[2026-03-04 00:53:29] Checking for CVMFS
[2026-03-04 00:53:29] No cvmfs_config command found, will try listing directly
[2026-03-04 00:53:29] CVMFS is ok
[2026-03-04 00:53:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 00:53:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 00:53:29] Further information can be found at the LHC@home message board.
[2026-03-04 00:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 00:53:29] Checking for apptainer binary...
[2026-03-04 00:53:29] which: no apptainer in ((null))
[2026-03-04 00:53:29] apptainer is not installed, using version from CVMFS
[2026-03-04 00:53:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 00:53:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-03-04 00:53:29] apptainer works
[2026-03-04 00:53:29] Set ATHENA_PROC_NUMBER=4
[2026-03-04 00:53:29] Set ATHENA_CORE_NUMBER=4
[2026-03-04 00:53:29] Starting ATLAS job with PandaID=7036240194
[2026-03-04 00:53:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 04:05:13]  *** The last 200 lines of the pilot log: ***
[2026-03-04 04:05:13] 2026-03-04 03:04:33,675 | INFO     | reading metadata from: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036240194/jobReport.json
[2026-03-04 04:05:13] 2026-03-04 03:04:33,678 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot56/slots/0/workernode_map.json
[2026-03-04 04:05:13] 2026-03-04 03:04:33,678 | INFO     | this job has now completed (state=finished)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,678 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,678 | INFO     | log transfer has been attempted: DONE
[2026-03-04 04:05:13] 2026-03-04 03:04:33,678 | INFO     | job 7036240194 has finished - writing final server update
[2026-03-04 04:05:13] 2026-03-04 03:04:33,679 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1103451/.job.ad'
[2026-03-04 04:05:13] 2026-03-04 03:04:33,679 | INFO     | total number of processed events: 400 (read)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,703 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-7036240194/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,703 | INFO     | extracted standard info from prmon json
[2026-03-04 04:05:13] 2026-03-04 03:04:33,703 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 04:05:13] 2026-03-04 03:04:33,704 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 04:05:13] 2026-03-04 03:04:33,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 04:05:13] 2026-03-04 03:04:33,704 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 04:05:13] 2026-03-04 03:04:33,707 | INFO     | fitting pss+swap vs Time
[2026-03-04 04:05:13] 2026-03-04 03:04:33,708 | INFO     | sum of square deviations: 2027639878.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,709 | INFO     | sum of deviations: 24860873360.999996
[2026-03-04 04:05:13] 2026-03-04 03:04:33,709 | INFO     | mean x: 1772587730.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,709 | INFO     | mean y: 2312384.128342246
[2026-03-04 04:05:13] 2026-03-04 03:04:33,709 | INFO     | intersect: -21731369003.248898
[2026-03-04 04:05:13] 2026-03-04 03:04:33,710 | INFO     | chi2: 1.332837503070605
[2026-03-04 04:05:13] 2026-03-04 03:04:33,710 | INFO     | sum of square deviations: 1869302025.5
[2026-03-04 04:05:13] 2026-03-04 03:04:33,711 | INFO     | sum of deviations: 24004052538.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,711 | INFO     | mean x: 1772587577.5
[2026-03-04 04:05:13] 2026-03-04 03:04:33,711 | INFO     | mean y: 2311558.714285714
[2026-03-04 04:05:13] 2026-03-04 03:04:33,711 | INFO     | intersect: -22759812890.990456
[2026-03-04 04:05:13] 2026-03-04 03:04:33,712 | INFO     | chi2: 1.333706990302759
[2026-03-04 04:05:13] 2026-03-04 03:04:33,712 | INFO     | current chi2=1.333706990302759 (change=-0.06523580182511604 %)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,712 | INFO     | right removable region: 181
[2026-03-04 04:05:13] 2026-03-04 03:04:33,712 | INFO     | sum of square deviations: 1869302025.5
[2026-03-04 04:05:13] 2026-03-04 03:04:33,713 | INFO     | sum of deviations: 1082285881.5
[2026-03-04 04:05:13] 2026-03-04 03:04:33,713 | INFO     | mean x: 1772587882.5
[2026-03-04 04:05:13] 2026-03-04 03:04:33,713 | INFO     | mean y: 2334970.291208791
[2026-03-04 04:05:13] 2026-03-04 03:04:33,714 | INFO     | intersect: -1023955491.4840015
[2026-03-04 04:05:13] 2026-03-04 03:04:33,714 | INFO     | chi2: 0.005001070512117241
[2026-03-04 04:05:13] 2026-03-04 03:04:33,714 | INFO     | current chi2=0.005001070512117241 (change=99.62478017758386 %)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,714 | INFO     | sum of square deviations: 1719429448.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,715 | INFO     | sum of deviations: 1293427286.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,715 | INFO     | mean x: 1772588035.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,716 | INFO     | mean y: 2334750.1920903954
[2026-03-04 04:05:13] 2026-03-04 03:04:33,716 | INFO     | intersect: -1331080665.004476
[2026-03-04 04:05:13] 2026-03-04 03:04:33,716 | INFO     | chi2: 0.004749354351932203
[2026-03-04 04:05:13] 2026-03-04 03:04:33,716 | INFO     | current chi2=0.004749354351932203 (change=5.033245573625635 %)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,716 | INFO     | left removable region: 20
[2026-03-04 04:05:13] 2026-03-04 03:04:33,716 | INFO     | sum of square deviations: 1294014960.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,717 | INFO     | sum of deviations: 3183863890.000001
[2026-03-04 04:05:13] 2026-03-04 03:04:33,717 | INFO     | mean x: 1772588157.0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,718 | INFO     | mean y: 2331930.267080745
[2026-03-04 04:05:13] 2026-03-04 03:04:33,718 | INFO     | intersect: -4359039150.724095
[2026-03-04 04:05:13] 2026-03-04 03:04:33,718 | INFO     | chi2: 0.0001185461695714989
[2026-03-04 04:05:13] 2026-03-04 03:04:33,718 | INFO     | current memory leak: 2.46 B/s (using 161 data points, chi2=0.00)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | could have reported an average CPU frequency of 2768 MHz (10 samples)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | ..............................
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | . Timing measurements:
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | . get job = 0 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | . initial setup = 8 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | . payload setup = 8 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | . stage-in = 0 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | . payload execution = 11413 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,719 | INFO     | . stage-out = 0 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,720 | INFO     | . log creation = 0 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,720 | INFO     | ..............................
[2026-03-04 04:05:13] 2026-03-04 03:04:33,811 | INFO     | 
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | job summary report
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | --------------------------------------------------
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | PanDA job id: 7036240194
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | task id: 48852301
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | errors: (none)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | pilot state: finished 
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | transexitcode: 0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,812 | INFO     | exeerrorcode: 0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | exeerrordiag: 
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | exitcode: 0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | exitmsg: OK
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | cpuconsumptiontime: 44676 s
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | nevents: 400
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | neventsw: 0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | pid: 3189547
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | pgrp: 3189547
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | corecount: 4
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | event service: False
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | sizes: {0: 2286896, 1: 2287158, 11: 2287186, 11426: 2317080, 11428: 2326100, 11431: 2326156, 11432: 2326478}
[2026-03-04 04:05:13] 2026-03-04 03:04:33,813 | INFO     | --------------------------------------------------
[2026-03-04 04:05:13] 2026-03-04 03:04:33,814 | INFO     | 
[2026-03-04 04:05:13] 2026-03-04 03:04:33,814 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-03-04 04:05:13] 2026-03-04 03:04:33,846 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,846 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,846 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,846 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,846 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,847 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | job 7036240194 has completed (purged errors)
[2026-03-04 04:05:13] 2026-03-04 03:04:33,848 | INFO     | overall cleanup function is called
[2026-03-04 04:05:13] 2026-03-04 03:04:34,857 | INFO     | --- collectZombieJob: --- 10, [3189547]
[2026-03-04 04:05:13] 2026-03-04 03:04:34,857 | INFO     | zombie collector waiting for pid 3189547
[2026-03-04 04:05:13] 2026-03-04 03:04:34,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 04:05:13] 2026-03-04 03:04:34,858 | INFO     | collected zombie processes
[2026-03-04 04:05:13] 2026-03-04 03:04:34,858 | INFO     | will attempt to kill all subprocesses of pid=3189547
[2026-03-04 04:05:13] 2026-03-04 03:04:35,464 | INFO     | process IDs to be killed: [3189547] (in reverse order)
[2026-03-04 04:05:13] 2026-03-04 03:04:35,704 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 04:05:13] 2026-03-04 03:04:35,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 04:05:13] 2026-03-04 03:04:35,726 | INFO     | did not find any defunct processes belonging to 3189547
[2026-03-04 04:05:13] 2026-03-04 03:04:35,744 | INFO     | did not find any defunct processes belonging to 3189547
[2026-03-04 04:05:13] 2026-03-04 03:04:35,744 | INFO     | ready for new job
[2026-03-04 04:05:13] 2026-03-04 03:04:35,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 04:05:13] 2026-03-04 03:04:35,747 | INFO     | **************************************
[2026-03-04 04:05:13] 2026-03-04 03:04:35,747 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 04:05:13] 2026-03-04 03:04:35,747 | INFO     | **************************************
[2026-03-04 04:05:13] 2026-03-04 03:04:35,747 | INFO     | 
[2026-03-04 04:05:13] 2026-03-04 03:04:35,755 | INFO     | architecture information:
[2026-03-04 04:05:13] 2026-03-04 03:04:35,755 | INFO     | executing command: cat /etc/os-release
[2026-03-04 04:05:13] 2026-03-04 03:04:35,776 | INFO     | cat /etc/os-release:
[2026-03-04 04:05:13] NAME="CentOS Linux"
[2026-03-04 04:05:13] VERSION="7 (Core)"
[2026-03-04 04:05:13] ID="centos"
[2026-03-04 04:05:13] ID_LIKE="rhel fedora"
[2026-03-04 04:05:13] VERSION_ID="7"
[2026-03-04 04:05:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 04:05:13] ANSI_COLOR="0;31"
[2026-03-04 04:05:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 04:05:13] HOME_URL="https://www.centos.org/"
[2026-03-04 04:05:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 04:05:13] 
[2026-03-04 04:05:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 04:05:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 04:05:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 04:05:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 04:05:13] 
[2026-03-04 04:05:13] 2026-03-04 03:04:35,776 | INFO     | **************************************
[2026-03-04 04:05:13] 2026-03-04 03:04:36,279 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-03-04 04:05:13] 2026-03-04 03:04:36,301 | INFO     | sufficient remaining disk space (3319574560768 B)
[2026-03-04 04:05:13] 2026-03-04 03:04:36,301 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 04:05:13] 2026-03-04 03:04:36,301 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 04:05:13] 2026-03-04 03:04:36,302 | INFO     | update_server=False
[2026-03-04 04:05:13] 2026-03-04 03:04:36,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 04:05:13] 2026-03-04 03:04:36,315 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 04:05:13] 2026-03-04 03:04:36,315 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 04:05:13] 2026-03-04 03:04:36,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:05:13] 2026-03-04 03:04:36,315 | INFO     | will abort loop
[2026-03-04 04:05:13] 2026-03-04 03:04:36,532 | INFO     | all job control threads have been joined
[2026-03-04 04:05:13] 2026-03-04 03:04:36,856 | INFO     | all data control threads have been joined
[2026-03-04 04:05:13] 2026-03-04 03:04:37,098 | INFO     | all payload control threads have been joined
[2026-03-04 04:05:13] 2026-03-04 03:04:37,307 | INFO     | [job] retrieve thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:37,319 | INFO     | [job] job monitor thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:37,327 | INFO     | [data] copytool_in thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:37,347 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 04:05:13] 2026-03-04 03:04:37,537 | INFO     | [job] control thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:37,861 | INFO     | [data] control thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:37,981 | INFO     | [payload] validate_post thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:38,011 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:38,033 | INFO     | [payload] failed_post thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:38,050 | INFO     | [job] validate thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:38,103 | INFO     | [payload] control thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:38,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 04:05:13] 2026-03-04 03:04:38,166 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:38,543 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:38,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 04:05:13] 2026-03-04 03:04:39,353 | INFO     | [data] copytool_out thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:39,828 | INFO     | [job] queue monitor thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:42,119 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:04:46,943 | INFO     | job.realtimelogging is not enabled
[2026-03-04 04:05:13] 2026-03-04 03:04:47,948 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 04:05:13] 2026-03-04 03:05:06,828 | INFO     | [monitor] cgroup control has ended
[2026-03-04 04:05:13] 2026-03-04 03:05:07,053 | INFO     | PID=3179344 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 04:05:13] 2026-03-04 03:05:07,053 | INFO     | .. there are 18 such processes running
[2026-03-04 04:05:13] 2026-03-04 03:05:07,055 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 04:05:13] 2026-03-04 03:05:07,056 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 04:05:13] 2026-03-04 03:05:07,056 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 04:05:13] 2026-03-04 03:05:07,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22646710122304)>', '<ExcThread(monitor, started 22646468384512)>']
[2026-03-04 04:05:13] 2026-03-04 03:05:08,061 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 04:05:13] 2026-03-04 03:05:08,061 | INFO     | [monitor] control thread has ended
[2026-03-04 04:05:13] 2026-03-04 03:05:12,810 | INFO     | all workflow threads have been joined
[2026-03-04 04:05:13] 2026-03-04 03:05:12,811 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 04:05:13] 2026-03-04 03:05:12,811 | INFO     | traces error code: 0
[2026-03-04 04:05:13] 2026-03-04 03:05:12,811 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 04:05:13] 2026-03-04 03:05:12,933 [wrapper] ==== pilot stdout END ====
[2026-03-04 04:05:13] 2026-03-04 03:05:12,937 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 04:05:13] 2026-03-04 03:05:12,941 [wrapper] pilotpid: 3179344
[2026-03-04 04:05:13] 2026-03-04 03:05:12,944 [wrapper] Pilot exit status: 0
[2026-03-04 04:05:13] 2026-03-04 03:05:12,958 [wrapper] pandaids: 7036240194
[2026-03-04 04:05:13] 2026-03-04 03:05:13,108 [wrapper] cleanup supervisor_pilot 3485679 3179345
[2026-03-04 04:05:13] 2026-03-04 03:05:13,113 [wrapper] Test setup, not cleaning
[2026-03-04 04:05:13] 2026-03-04 03:05:13,118 [wrapper] apfmon messages muted
[2026-03-04 04:05:13] 2026-03-04 03:05:13,122 [wrapper] ==== wrapper stdout END ====
[2026-03-04 04:05:13] 2026-03-04 03:05:13,125 [wrapper] ==== wrapper stderr END ====
[2026-03-04 04:05:13]  *** Error codes and diagnostics ***
[2026-03-04 04:05:13]     "exeErrorCode": 0,
[2026-03-04 04:05:13]     "exeErrorDiag": "",
[2026-03-04 04:05:13]     "pilotErrorCode": 0,
[2026-03-04 04:05:13]     "pilotErrorDiag": "",
[2026-03-04 04:05:13]  *** Listing of results directory ***
[2026-03-04 04:05:13] total 427372
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc      5111 Mar  3 09:25 queuedata.json
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-04 04:05:13] -rwx------ 1 boinc boinc     36322 Mar  3 09:25 runpilot2-wrapper.sh
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc       100 Mar  4 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 04:05:13] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 00:53 run_atlas
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc       105 Mar  4 00:53 job.xml
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc      6697 Mar  4 00:53 init_data.xml
[2026-03-04 04:05:13] -rw-r--r-- 2 boinc boinc 235913787 Mar  4 00:53 EVNT.48462218._000001.pool.root.1
[2026-03-04 04:05:13] drwxrwx--x 2 boinc boinc      4096 Mar  4 00:53 shared
[2026-03-04 04:05:13] -rw-r--r-- 2 boinc boinc    597945 Mar  4 00:53 input.tar.gz
[2026-03-04 04:05:13] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:53 start_atlas.sh
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc         0 Mar  4 00:53 boinc_lockfile
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc      2621 Mar  4 00:53 pandaJob.out
[2026-03-04 04:05:13] -rw------- 1 boinc boinc    998484 Mar  4 00:53 agis_schedconf.cvmfs.json
[2026-03-04 04:05:13] -rw------- 1 boinc boinc       443 Mar  4 00:53 workernode_map.json
[2026-03-04 04:05:13] drwx------ 5 boinc boinc      4096 Mar  4 00:53 pilot3
[2026-03-04 04:05:13] -rw------- 1 boinc boinc 193864321 Mar  4 04:03 HITS.48852301._000002.pool.root.1
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc       530 Mar  4 04:04 boinc_task_state.xml
[2026-03-04 04:05:13] -rw------- 1 boinc boinc        95 Mar  4 04:04 pilot_heartbeat.json
[2026-03-04 04:05:13] -rw------- 1 boinc boinc      1029 Mar  4 04:04 memory_monitor_summary.json
[2026-03-04 04:05:13] -rw------- 1 boinc boinc   1516092 Mar  4 04:04 agis_ddmendpoints.agis.ALL.json
[2026-03-04 04:05:13] -rw------- 1 boinc boinc    350936 Mar  4 04:04 log.48852301._000002.job.log.tgz.1
[2026-03-04 04:05:13] -rw------- 1 boinc boinc      6339 Mar  4 04:04 heartbeat.json
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc      8192 Mar  4 04:05 boinc_mmap_file
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc        28 Mar  4 04:05 wrapper_checkpoint.txt
[2026-03-04 04:05:13] -rw------- 1 boinc boinc      5089 Mar  4 04:05 pilotlog.txt
[2026-03-04 04:05:13] -rw------- 1 boinc boinc   1603986 Mar  4 04:05 log.48852301._000002.job.log.1
[2026-03-04 04:05:13] -rw------- 1 boinc boinc       357 Mar  4 04:05 output.list
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc       620 Mar  4 04:05 runtime_log
[2026-03-04 04:05:13] -rw------- 1 boinc boinc   1976320 Mar  4 04:05 result.tar.gz
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc      9205 Mar  4 04:05 runtime_log.err
[2026-03-04 04:05:13] -rw------- 1 boinc boinc       664 Mar  4 04:05 JrvLDmlFaH9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwvDLDmqqNoXo.diag
[2026-03-04 04:05:13] -rw-r--r-- 1 boinc boinc     21113 Mar  4 04:05 stderr.txt
[2026-03-04 04:05:13] HITS file was successfully produced:
[2026-03-04 04:05:13] -rw------- 1 boinc boinc 193864321 Mar  4 04:03 shared/HITS.pool.root.1
[2026-03-04 04:05:13]  *** Contents of shared directory: ***
[2026-03-04 04:05:13] total 422252
[2026-03-04 04:05:13] -rw-r--r-- 2 boinc boinc 235913787 Mar  4 00:53 ATLAS.root_0
[2026-03-04 04:05:13] -rw-r--r-- 2 boinc boinc    597945 Mar  4 00:53 input.tar.gz
[2026-03-04 04:05:13] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:53 start_atlas.sh
[2026-03-04 04:05:13] -rw------- 1 boinc boinc 193864321 Mar  4 04:03 HITS.pool.root.1
[2026-03-04 04:05:13] -rw------- 1 boinc boinc   1976320 Mar  4 04:05 result.tar.gz
04:05:14 (3172001): run_atlas exited; CPU time 45374.203209
04:05:14 (3172001): called boinc_finish(0)

</stderr_txt>
]]>

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