Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:39:39 (2335178): wrapper (7.7.26015): starting
04:39:39 (2335178): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 04:39:39] Arguments: --nthreads 4
[2026-03-04 04:39:39] Threads: 4
[2026-03-04 04:39:39] Checking for CVMFS
[2026-03-04 04:39:39] No cvmfs_config command found, will try listing directly
[2026-03-04 04:39:39] CVMFS is ok
[2026-03-04 04:39:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 04:39:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 04:39:39] Further information can be found at the LHC@home message board.
[2026-03-04 04:39:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 04:39:39] Checking for apptainer binary...
[2026-03-04 04:39:39] which: no apptainer in ((null))
[2026-03-04 04:39:39] apptainer is not installed, using version from CVMFS
[2026-03-04 04:39:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 04:39:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-04 04:39:39] apptainer works
[2026-03-04 04:39:39] Set ATHENA_PROC_NUMBER=4
[2026-03-04 04:39:39] Set ATHENA_CORE_NUMBER=4
[2026-03-04 04:39:39] Starting ATLAS job with PandaID=7036245407
[2026-03-04 04:39:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 10:25:32]  *** The last 200 lines of the pilot log: ***
[2026-03-04 10:25:32] 2026-03-04 09:24:38,678 | INFO     | reading metadata from: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7036245407/jobReport.json
[2026-03-04 10:25:32] 2026-03-04 09:24:38,681 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot24/slots/0/workernode_map.json
[2026-03-04 10:25:32] 2026-03-04 09:24:38,682 | INFO     | this job has now completed (state=finished)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,682 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,682 | INFO     | log transfer has been attempted: DONE
[2026-03-04 10:25:32] 2026-03-04 09:24:38,682 | INFO     | job 7036245407 has finished - writing final server update
[2026-03-04 10:25:32] 2026-03-04 09:24:38,682 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1565102/.job.ad'
[2026-03-04 10:25:32] 2026-03-04 09:24:38,682 | INFO     | total number of processed events: 400 (read)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,694 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7036245407/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,695 | INFO     | extracted standard info from prmon json
[2026-03-04 10:25:32] 2026-03-04 09:24:38,695 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 10:25:32] 2026-03-04 09:24:38,695 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 10:25:32] 2026-03-04 09:24:38,696 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 10:25:32] 2026-03-04 09:24:38,696 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 10:25:32] 2026-03-04 09:24:38,702 | INFO     | fitting pss+swap vs Time
[2026-03-04 10:25:32] 2026-03-04 09:24:38,702 | INFO     | sum of square deviations: 12080189290.0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,705 | INFO     | sum of deviations: 39535020001.99999
[2026-03-04 10:25:32] 2026-03-04 09:24:38,705 | INFO     | mean x: 1772605925.0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,705 | INFO     | mean y: 2338372.3569321535
[2026-03-04 10:25:32] 2026-03-04 09:24:38,705 | INFO     | intersect: -5798896113.144967
[2026-03-04 10:25:32] 2026-03-04 09:24:38,706 | INFO     | chi2: 1.334105223929403
[2026-03-04 10:25:32] 2026-03-04 09:24:38,706 | INFO     | sum of square deviations: 11553509647.5
[2026-03-04 10:25:32] 2026-03-04 09:24:38,709 | INFO     | sum of deviations: 38514835018.0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,709 | INFO     | mean x: 1772605772.5
[2026-03-04 10:25:32] 2026-03-04 09:24:38,710 | INFO     | mean y: 2338076.9221556885
[2026-03-04 10:25:32] 2026-03-04 09:24:38,710 | INFO     | intersect: -5906829004.144406
[2026-03-04 10:25:32] 2026-03-04 09:24:38,710 | INFO     | chi2: 1.3343903785593598
[2026-03-04 10:25:32] 2026-03-04 09:24:38,710 | INFO     | current chi2=1.3343903785593598 (change=-0.021374223325282413 %)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,710 | INFO     | right removable region: 333
[2026-03-04 10:25:32] 2026-03-04 09:24:38,711 | INFO     | sum of square deviations: 11553509647.5
[2026-03-04 10:25:32] 2026-03-04 09:24:38,714 | INFO     | sum of deviations: -4271313055.499995
[2026-03-04 10:25:32] 2026-03-04 09:24:38,714 | INFO     | mean x: 1772606077.5
[2026-03-04 10:25:32] 2026-03-04 09:24:38,714 | INFO     | mean y: 2350962.3143712576
[2026-03-04 10:25:32] 2026-03-04 09:24:38,714 | INFO     | intersect: 657680443.3195401
[2026-03-04 10:25:32] 2026-03-04 09:24:38,715 | INFO     | chi2: 0.040749587887140004
[2026-03-04 10:25:32] 2026-03-04 09:24:38,715 | INFO     | current chi2=0.040749587887140004 (change=96.94554918485977 %)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,715 | INFO     | sum of square deviations: 11042365180.0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,718 | INFO     | sum of deviations: -5624989462.000004
[2026-03-04 10:25:32] 2026-03-04 09:24:38,718 | INFO     | mean x: 1772606230.0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,718 | INFO     | mean y: 2351358.838905775
[2026-03-04 10:25:32] 2026-03-04 09:24:38,718 | INFO     | intersect: 905318359.2497321
[2026-03-04 10:25:32] 2026-03-04 09:24:38,719 | INFO     | chi2: 0.03604590973171781
[2026-03-04 10:25:32] 2026-03-04 09:24:38,719 | INFO     | current chi2=0.03604590973171781 (change=11.542885215059085 %)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,719 | INFO     | left removable region: 20
[2026-03-04 10:25:32] 2026-03-04 09:24:38,720 | INFO     | sum of square deviations: 9508390372.0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,722 | INFO     | sum of deviations: 2173785325.000004
[2026-03-04 10:25:32] 2026-03-04 09:24:38,722 | INFO     | mean x: 1772606352.0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,722 | INFO     | mean y: 2348565.0926517574
[2026-03-04 10:25:32] 2026-03-04 09:24:38,723 | INFO     | intersect: -402900433.34207416
[2026-03-04 10:25:32] 2026-03-04 09:24:38,723 | INFO     | chi2: 0.02322194053238986
[2026-03-04 10:25:32] 2026-03-04 09:24:38,723 | INFO     | current memory leak: 0.23 B/s (using 313 data points, chi2=0.02)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,724 | INFO     | could have reported an average CPU frequency of 2565 MHz (15 samples)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,724 | INFO     | ..............................
[2026-03-04 10:25:32] 2026-03-04 09:24:38,724 | INFO     | . Timing measurements:
[2026-03-04 10:25:32] 2026-03-04 09:24:38,724 | INFO     | . get job = 0 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,724 | INFO     | . initial setup = 5 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,724 | INFO     | . payload setup = 5 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,725 | INFO     | . stage-in = 0 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,725 | INFO     | . payload execution = 20660 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,725 | INFO     | . stage-out = 1 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,725 | INFO     | . log creation = 0 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,725 | INFO     | ..............................
[2026-03-04 10:25:32] 2026-03-04 09:24:38,823 | INFO     | 
[2026-03-04 10:25:32] 2026-03-04 09:24:38,823 | INFO     | job summary report
[2026-03-04 10:25:32] 2026-03-04 09:24:38,823 | INFO     | --------------------------------------------------
[2026-03-04 10:25:32] 2026-03-04 09:24:38,823 | INFO     | PanDA job id: 7036245407
[2026-03-04 10:25:32] 2026-03-04 09:24:38,823 | INFO     | task id: 48849517
[2026-03-04 10:25:32] 2026-03-04 09:24:38,823 | INFO     | errors: (none)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | pilot state: finished 
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | transexitcode: 0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | exeerrorcode: 0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | exeerrordiag: 
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | exitcode: 0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | exitmsg: OK
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | cpuconsumptiontime: 80229 s
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | nevents: 400
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | neventsw: 0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | pid: 2343968
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | pgrp: 2343968
[2026-03-04 10:25:32] 2026-03-04 09:24:38,824 | INFO     | corecount: 4
[2026-03-04 10:25:32] 2026-03-04 09:24:38,825 | INFO     | event service: False
[2026-03-04 10:25:32] 2026-03-04 09:24:38,825 | INFO     | sizes: {0: 2286933, 1: 2287139, 11: 2287167, 20670: 2320777, 20672: 2329797, 20673: 2329853, 20674: 2330175}
[2026-03-04 10:25:32] 2026-03-04 09:24:38,825 | INFO     | --------------------------------------------------
[2026-03-04 10:25:32] 2026-03-04 09:24:38,825 | INFO     | 
[2026-03-04 10:25:32] 2026-03-04 09:24:38,825 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-03-04 10:25:32] 2026-03-04 09:24:38,845 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,845 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,845 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,845 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,847 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,847 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 10:25:32] 2026-03-04 09:24:38,847 | INFO     | job 7036245407 has completed (purged errors)
[2026-03-04 10:25:32] 2026-03-04 09:24:38,847 | INFO     | overall cleanup function is called
[2026-03-04 10:25:32] 2026-03-04 09:24:39,854 | INFO     | --- collectZombieJob: --- 10, [2343968]
[2026-03-04 10:25:32] 2026-03-04 09:24:39,855 | INFO     | zombie collector waiting for pid 2343968
[2026-03-04 10:25:32] 2026-03-04 09:24:39,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 10:25:32] 2026-03-04 09:24:39,855 | INFO     | collected zombie processes
[2026-03-04 10:25:32] 2026-03-04 09:24:39,855 | INFO     | will attempt to kill all subprocesses of pid=2343968
[2026-03-04 10:25:32] 2026-03-04 09:24:40,154 | INFO     | process IDs to be killed: [2343968] (in reverse order)
[2026-03-04 10:25:32] 2026-03-04 09:24:40,265 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 10:25:32] 2026-03-04 09:24:40,265 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 10:25:32] 2026-03-04 09:24:40,275 | INFO     | did not find any defunct processes belonging to 2343968
[2026-03-04 10:25:32] 2026-03-04 09:24:40,283 | INFO     | did not find any defunct processes belonging to 2343968
[2026-03-04 10:25:32] 2026-03-04 09:24:40,284 | INFO     | ready for new job
[2026-03-04 10:25:32] 2026-03-04 09:24:40,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 10:25:32] 2026-03-04 09:24:40,287 | INFO     | **************************************
[2026-03-04 10:25:32] 2026-03-04 09:24:40,287 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 10:25:32] 2026-03-04 09:24:40,287 | INFO     | **************************************
[2026-03-04 10:25:32] 2026-03-04 09:24:40,287 | INFO     | 
[2026-03-04 10:25:32] 2026-03-04 09:24:40,291 | INFO     | architecture information:
[2026-03-04 10:25:32] 2026-03-04 09:24:40,291 | INFO     | executing command: cat /etc/os-release
[2026-03-04 10:25:32] 2026-03-04 09:24:40,306 | INFO     | cat /etc/os-release:
[2026-03-04 10:25:32] NAME="CentOS Linux"
[2026-03-04 10:25:32] VERSION="7 (Core)"
[2026-03-04 10:25:32] ID="centos"
[2026-03-04 10:25:32] ID_LIKE="rhel fedora"
[2026-03-04 10:25:32] VERSION_ID="7"
[2026-03-04 10:25:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 10:25:32] ANSI_COLOR="0;31"
[2026-03-04 10:25:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 10:25:32] HOME_URL="https://www.centos.org/"
[2026-03-04 10:25:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 10:25:32] 
[2026-03-04 10:25:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 10:25:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 10:25:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 10:25:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 10:25:32] 
[2026-03-04 10:25:32] 2026-03-04 09:24:40,306 | INFO     | **************************************
[2026-03-04 10:25:32] 2026-03-04 09:24:40,809 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-03-04 10:25:32] 2026-03-04 09:24:40,824 | INFO     | sufficient remaining disk space (672344834048 B)
[2026-03-04 10:25:32] 2026-03-04 09:24:40,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 10:25:32] 2026-03-04 09:24:40,824 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 10:25:32] 2026-03-04 09:24:40,824 | INFO     | update_server=False
[2026-03-04 10:25:32] 2026-03-04 09:24:40,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 10:25:32] 2026-03-04 09:24:40,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:25:32] 2026-03-04 09:24:40,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 10:25:32] 2026-03-04 09:24:41,037 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 10:25:32] 2026-03-04 09:24:41,038 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 10:25:32] 2026-03-04 09:24:41,038 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 10:25:32] 2026-03-04 09:24:41,038 | INFO     | will abort loop
[2026-03-04 10:25:32] 2026-03-04 09:24:41,186 | INFO     | all payload control threads have been joined
[2026-03-04 10:25:32] 2026-03-04 09:24:41,406 | INFO     | all data control threads have been joined
[2026-03-04 10:25:32] 2026-03-04 09:24:41,829 | INFO     | [job] retrieve thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:41,831 | INFO     | [job] queue monitor thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:41,993 | INFO     | [job] validate thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,043 | INFO     | [job] job monitor thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,164 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,192 | INFO     | [payload] control thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,395 | INFO     | all job control threads have been joined
[2026-03-04 10:25:32] 2026-03-04 09:24:42,411 | INFO     | [data] control thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,440 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,567 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,599 | INFO     | [payload] failed_post thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,788 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,797 | INFO     | [data] copytool_in thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:42,829 | INFO     | [data] copytool_out thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:43,028 | INFO     | [payload] validate_post thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:43,396 | INFO     | [job] control thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:24:44,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 10:25:32] 2026-03-04 09:24:47,717 [wrapper] supervise_pilot (15 min periods counter: 24)
[2026-03-04 10:25:32] 2026-03-04 09:24:48,101 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 10:25:32] 2026-03-04 09:25:11,257 | INFO     | PID=2338950 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 10:25:32] 2026-03-04 09:25:11,257 | INFO     | .. there are 13 such processes running
[2026-03-04 10:25:32] 2026-03-04 09:25:11,258 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 10:25:32] 2026-03-04 09:25:11,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 10:25:32] 2026-03-04 09:25:11,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 10:25:32] 2026-03-04 09:25:26,178 | INFO     | [monitor] cgroup control has ended
[2026-03-04 10:25:32] 2026-03-04 09:25:27,184 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22649903650624)>', '<ExcThread(monitor, started 22649664448256)>']
[2026-03-04 10:25:32] 2026-03-04 09:25:27,327 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 10:25:32] 2026-03-04 09:25:27,327 | INFO     | [monitor] control thread has ended
[2026-03-04 10:25:32] 2026-03-04 09:25:32,185 | INFO     | all workflow threads have been joined
[2026-03-04 10:25:32] 2026-03-04 09:25:32,185 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 10:25:32] 2026-03-04 09:25:32,185 | INFO     | traces error code: 0
[2026-03-04 10:25:32] 2026-03-04 09:25:32,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 10:25:32] 2026-03-04 09:25:32,358 [wrapper] ==== pilot stdout END ====
[2026-03-04 10:25:32] 2026-03-04 09:25:32,361 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 10:25:32] 2026-03-04 09:25:32,364 [wrapper] pilotpid: 2338950
[2026-03-04 10:25:32] 2026-03-04 09:25:32,367 [wrapper] Pilot exit status: 0
[2026-03-04 10:25:32] 2026-03-04 09:25:32,377 [wrapper] pandaids: 7036245407
[2026-03-04 10:25:32] 2026-03-04 09:25:32,435 [wrapper] cleanup supervisor_pilot 2655052 2338951
[2026-03-04 10:25:32] 2026-03-04 09:25:32,438 [wrapper] Test setup, not cleaning
[2026-03-04 10:25:32] 2026-03-04 09:25:32,440 [wrapper] apfmon messages muted
[2026-03-04 10:25:32] 2026-03-04 09:25:32,443 [wrapper] ==== wrapper stdout END ====
[2026-03-04 10:25:32] 2026-03-04 09:25:32,445 [wrapper] ==== wrapper stderr END ====
[2026-03-04 10:25:32]  *** Error codes and diagnostics ***
[2026-03-04 10:25:32]     "exeErrorCode": 0,
[2026-03-04 10:25:32]     "exeErrorDiag": "",
[2026-03-04 10:25:32]     "pilotErrorCode": 0,
[2026-03-04 10:25:32]     "pilotErrorDiag": "",
[2026-03-04 10:25:32]  *** Listing of results directory ***
[2026-03-04 10:25:32] total 462552
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-04 10:25:32] -rwx------ 1 boinc boinc     36322 Mar  3 09:26 runpilot2-wrapper.sh
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc      5111 Mar  3 09:28 queuedata.json
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc       100 Mar  4 04:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 10:25:32] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 04:39 run_atlas
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc       105 Mar  4 04:39 job.xml
[2026-03-04 10:25:32] -rw-r--r-- 2 boinc boinc 247611654 Mar  4 04:39 EVNT.48457275._000001.pool.root.1
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc      6639 Mar  4 04:39 init_data.xml
[2026-03-04 10:25:32] -rw-r--r-- 2 boinc boinc     15845 Mar  4 04:39 start_atlas.sh
[2026-03-04 10:25:32] drwxrwx--x 2 boinc boinc      4096 Mar  4 04:39 shared
[2026-03-04 10:25:32] -rw-r--r-- 2 boinc boinc    597943 Mar  4 04:39 input.tar.gz
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc         0 Mar  4 04:39 boinc_lockfile
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc      2604 Mar  4 04:39 pandaJob.out
[2026-03-04 10:25:32] -rw------- 1 boinc boinc    997749 Mar  4 04:39 agis_schedconf.cvmfs.json
[2026-03-04 10:25:32] -rw------- 1 boinc boinc       452 Mar  4 04:39 workernode_map.json
[2026-03-04 10:25:32] drwx------ 5 boinc boinc      4096 Mar  4 04:39 pilot3
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc       530 Mar  4 10:23 boinc_task_state.xml
[2026-03-04 10:25:32] -rw------- 1 boinc boinc 215259348 Mar  4 10:23 HITS.48849517._000022.pool.root.1
[2026-03-04 10:25:32] -rw------- 1 boinc boinc      1033 Mar  4 10:24 memory_monitor_summary.json
[2026-03-04 10:25:32] -rw------- 1 boinc boinc   1516092 Mar  4 10:24 agis_ddmendpoints.agis.ALL.json
[2026-03-04 10:25:32] -rw------- 1 boinc boinc    508685 Mar  4 10:24 log.48849517._000022.job.log.tgz.1
[2026-03-04 10:25:32] -rw------- 1 boinc boinc      6391 Mar  4 10:24 heartbeat.json
[2026-03-04 10:25:32] -rw------- 1 boinc boinc        95 Mar  4 10:25 pilot_heartbeat.json
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc      8192 Mar  4 10:25 boinc_mmap_file
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc        28 Mar  4 10:25 wrapper_checkpoint.txt
[2026-03-04 10:25:32] -rw------- 1 boinc boinc      5016 Mar  4 10:25 pilotlog.txt
[2026-03-04 10:25:32] -rw------- 1 boinc boinc   2915488 Mar  4 10:25 log.48849517._000022.job.log.1
[2026-03-04 10:25:32] -rw------- 1 boinc boinc       357 Mar  4 10:25 output.list
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc       620 Mar  4 10:25 runtime_log
[2026-03-04 10:25:32] -rw------- 1 boinc boinc   3440640 Mar  4 10:25 result.tar.gz
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc      9205 Mar  4 10:25 runtime_log.err
[2026-03-04 10:25:32] -rw------- 1 boinc boinc       664 Mar  4 10:25 NyUKDmkGaH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDme9FLDmWJ55An.diag
[2026-03-04 10:25:32] -rw-r--r-- 1 boinc boinc     21133 Mar  4 10:25 stderr.txt
[2026-03-04 10:25:32] HITS file was successfully produced:
[2026-03-04 10:25:32] -rw------- 1 boinc boinc 215259348 Mar  4 10:23 shared/HITS.pool.root.1
[2026-03-04 10:25:32]  *** Contents of shared directory: ***
[2026-03-04 10:25:32] total 455996
[2026-03-04 10:25:32] -rw-r--r-- 2 boinc boinc 247611654 Mar  4 04:39 ATLAS.root_0
[2026-03-04 10:25:32] -rw-r--r-- 2 boinc boinc     15845 Mar  4 04:39 start_atlas.sh
[2026-03-04 10:25:32] -rw-r--r-- 2 boinc boinc    597943 Mar  4 04:39 input.tar.gz
[2026-03-04 10:25:32] -rw------- 1 boinc boinc 215259348 Mar  4 10:23 HITS.pool.root.1
[2026-03-04 10:25:32] -rw------- 1 boinc boinc   3440640 Mar  4 10:25 result.tar.gz
10:25:34 (2335178): run_atlas exited; CPU time 80946.015395
10:25:34 (2335178): called boinc_finish(0)

</stderr_txt>
]]>

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