Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:01:16 (236706): wrapper (7.7.26015): starting
00:01:16 (236706): wrapper: running run_atlas (--nthreads 4)
[2026-03-04 00:01:16] Arguments: --nthreads 4
[2026-03-04 00:01:16] Threads: 4
[2026-03-04 00:01:16] Checking for CVMFS
[2026-03-04 00:01:16] No cvmfs_config command found, will try listing directly
[2026-03-04 00:01:16] CVMFS is ok
[2026-03-04 00:01:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-04 00:01:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-04 00:01:16] Further information can be found at the LHC@home message board.
[2026-03-04 00:01:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-04 00:01:16] Checking for apptainer binary...
[2026-03-04 00:01:16] which: no apptainer in ((null))
[2026-03-04 00:01:16] apptainer is not installed, using version from CVMFS
[2026-03-04 00:01:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-04 00:01:17] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-03-04 00:01:17] apptainer works
[2026-03-04 00:01:17] Set ATHENA_PROC_NUMBER=4
[2026-03-04 00:01:17] Set ATHENA_CORE_NUMBER=4
[2026-03-04 00:01:17] Starting ATLAS job with PandaID=7036240428
[2026-03-04 00:01:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-04 02:47:02]  *** The last 200 lines of the pilot log: ***
[2026-03-04 02:47:02] 2026-03-04 01:46:22,258 | INFO     | total number of processed events: 400 (read)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,278 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-7036240428/memory_monitor_summary.json (trf name=prmon)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,278 | INFO     | extracted standard info from prmon json
[2026-03-04 02:47:02] 2026-03-04 01:46:22,278 | INFO     | extracted standard memory fields from prmon json
[2026-03-04 02:47:02] 2026-03-04 01:46:22,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-04 02:47:02] 2026-03-04 01:46:22,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-04 02:47:02] 2026-03-04 01:46:22,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-04 02:47:02] 2026-03-04 01:46:22,281 | INFO     | fitting pss+swap vs Time
[2026-03-04 02:47:02] 2026-03-04 01:46:22,281 | INFO     | sum of square deviations: 1318277740.5
[2026-03-04 02:47:02] 2026-03-04 01:46:22,282 | INFO     | sum of deviations: 11339383513.000002
[2026-03-04 02:47:02] 2026-03-04 01:46:22,282 | INFO     | mean x: 1772583838.5
[2026-03-04 02:47:02] 2026-03-04 01:46:22,282 | INFO     | mean y: 2301899.987654321
[2026-03-04 02:47:02] 2026-03-04 01:46:22,282 | INFO     | intersect: -15244870479.691282
[2026-03-04 02:47:02] 2026-03-04 01:46:22,282 | INFO     | chi2: 2.0389249115173795
[2026-03-04 02:47:02] 2026-03-04 01:46:22,282 | INFO     | sum of square deviations: 1199940638.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,283 | INFO     | sum of deviations: 20722599445.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,283 | INFO     | mean x: 1772583686.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,283 | INFO     | mean y: 2313672.0700636944
[2026-03-04 02:47:02] 2026-03-04 01:46:22,283 | INFO     | intersect: -30609652073.95516
[2026-03-04 02:47:02] 2026-03-04 01:46:22,283 | INFO     | chi2: 1.2706561406519599
[2026-03-04 02:47:02] 2026-03-04 01:46:22,283 | INFO     | current chi2=1.2706561406519599 (change=37.68009143081535 %)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,283 | INFO     | sum of square deviations: 1088905998.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | sum of deviations: 20029147876.499996
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | mean x: 1772583533.5
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | mean y: 2312719.335526316
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | intersect: -32602281048.289574
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | chi2: 1.2714682185776425
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | current chi2=1.2714682185776425 (change=-0.06391012483250896 %)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | right removable region: 151
[2026-03-04 02:47:02] 2026-03-04 01:46:22,284 | INFO     | sum of square deviations: 1199940638.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,285 | INFO     | sum of deviations: -7409952735.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,285 | INFO     | mean x: 1772583991.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,285 | INFO     | mean y: 2325631.8152866242
[2026-03-04 02:47:02] 2026-03-04 01:46:22,285 | INFO     | intersect: 10948503447.761265
[2026-03-04 02:47:02] 2026-03-04 01:46:22,285 | INFO     | chi2: 0.7922415051685341
[2026-03-04 02:47:02] 2026-03-04 01:46:22,285 | INFO     | current chi2=0.7922415051685341 (change=61.144154907649664 %)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,286 | INFO     | sum of square deviations: 1088905998.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,286 | INFO     | sum of deviations: -7565327481.999999
[2026-03-04 02:47:02] 2026-03-04 01:46:22,286 | INFO     | mean x: 1772584143.5
[2026-03-04 02:47:02] 2026-03-04 01:46:22,286 | INFO     | mean y: 2325857.2763157897
[2026-03-04 02:47:02] 2026-03-04 01:46:22,286 | INFO     | intersect: 12317603355.617342
[2026-03-04 02:47:02] 2026-03-04 01:46:22,286 | INFO     | chi2: 0.7913407398816243
[2026-03-04 02:47:02] 2026-03-04 01:46:22,286 | INFO     | current chi2=0.7913407398816243 (change=0.1136983206551547 %)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,287 | INFO     | left removable region: 20
[2026-03-04 02:47:02] 2026-03-04 01:46:22,287 | INFO     | sum of square deviations: 697054930.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,287 | INFO     | sum of deviations: 883770378.9999983
[2026-03-04 02:47:02] 2026-03-04 01:46:22,287 | INFO     | mean x: 1772584113.0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,287 | INFO     | mean y: 2340562.6412213743
[2026-03-04 02:47:02] 2026-03-04 01:46:22,287 | INFO     | intersect: -2245053818.96854
[2026-03-04 02:47:02] 2026-03-04 01:46:22,288 | INFO     | chi2: 0.0003183313682920185
[2026-03-04 02:47:02] 2026-03-04 01:46:22,288 | INFO     | current memory leak: 1.27 B/s (using 131 data points, chi2=0.00)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,288 | INFO     | could have reported an average CPU frequency of 2721 MHz (9 samples)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,290 | INFO     | ..............................
[2026-03-04 02:47:02] 2026-03-04 01:46:22,290 | INFO     | . Timing measurements:
[2026-03-04 02:47:02] 2026-03-04 01:46:22,290 | INFO     | . get job = 0 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,290 | INFO     | . initial setup = 8 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,290 | INFO     | . payload setup = 9 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,290 | INFO     | . stage-in = 0 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,290 | INFO     | . payload execution = 9851 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,291 | INFO     | . stage-out = 0 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,291 | INFO     | . log creation = 0 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,291 | INFO     | ..............................
[2026-03-04 02:47:02] 2026-03-04 01:46:22,353 | INFO     | 
[2026-03-04 02:47:02] 2026-03-04 01:46:22,353 | INFO     | job summary report
[2026-03-04 02:47:02] 2026-03-04 01:46:22,353 | INFO     | --------------------------------------------------
[2026-03-04 02:47:02] 2026-03-04 01:46:22,353 | INFO     | PanDA job id: 7036240428
[2026-03-04 02:47:02] 2026-03-04 01:46:22,353 | INFO     | task id: 48868979
[2026-03-04 02:47:02] 2026-03-04 01:46:22,353 | INFO     | errors: (none)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,353 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | pilot state: finished 
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | transexitcode: 0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | exeerrorcode: 0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | exeerrordiag: 
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | exitcode: 0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | exitmsg: OK
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | cpuconsumptiontime: 37612 s
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | nevents: 400
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | neventsw: 0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | pid: 255655
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | pgrp: 255655
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | corecount: 4
[2026-03-04 02:47:02] 2026-03-04 01:46:22,354 | INFO     | event service: False
[2026-03-04 02:47:02] 2026-03-04 01:46:22,355 | INFO     | sizes: {0: 2286679, 1: 2287140, 11: 2287140, 9865: 2316229, 9866: 2325249, 9869: 2325305, 9871: 2325691}
[2026-03-04 02:47:02] 2026-03-04 01:46:22,355 | INFO     | --------------------------------------------------
[2026-03-04 02:47:02] 2026-03-04 01:46:22,355 | INFO     | 
[2026-03-04 02:47:02] 2026-03-04 01:46:22,355 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2026-03-04 02:47:02] 2026-03-04 01:46:22,388 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,388 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,388 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,388 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,390 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-04 02:47:02] 2026-03-04 01:46:22,390 | INFO     | job 7036240428 has completed (purged errors)
[2026-03-04 02:47:02] 2026-03-04 01:46:22,390 | INFO     | overall cleanup function is called
[2026-03-04 02:47:02] 2026-03-04 01:46:23,399 | INFO     | --- collectZombieJob: --- 10, [255655]
[2026-03-04 02:47:02] 2026-03-04 01:46:23,399 | INFO     | zombie collector waiting for pid 255655
[2026-03-04 02:47:02] 2026-03-04 01:46:23,399 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-04 02:47:02] 2026-03-04 01:46:23,400 | INFO     | collected zombie processes
[2026-03-04 02:47:02] 2026-03-04 01:46:23,400 | INFO     | will attempt to kill all subprocesses of pid=255655
[2026-03-04 02:47:02] 2026-03-04 01:46:24,101 | INFO     | process IDs to be killed: [255655] (in reverse order)
[2026-03-04 02:47:02] 2026-03-04 01:46:24,380 | WARNING  | found no corresponding commands to process id(s)
[2026-03-04 02:47:02] 2026-03-04 01:46:24,381 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-04 02:47:02] 2026-03-04 01:46:24,409 | INFO     | did not find any defunct processes belonging to 255655
[2026-03-04 02:47:02] 2026-03-04 01:46:24,433 | INFO     | did not find any defunct processes belonging to 255655
[2026-03-04 02:47:02] 2026-03-04 01:46:24,433 | INFO     | ready for new job
[2026-03-04 02:47:02] 2026-03-04 01:46:24,433 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-04 02:47:02] 2026-03-04 01:46:24,436 | INFO     | **************************************
[2026-03-04 02:47:02] 2026-03-04 01:46:24,436 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-04 02:47:02] 2026-03-04 01:46:24,436 | INFO     | **************************************
[2026-03-04 02:47:02] 2026-03-04 01:46:24,436 | INFO     | 
[2026-03-04 02:47:02] 2026-03-04 01:46:24,444 | INFO     | architecture information:
[2026-03-04 02:47:02] 2026-03-04 01:46:24,445 | INFO     | executing command: cat /etc/os-release
[2026-03-04 02:47:02] 2026-03-04 01:46:24,469 | INFO     | cat /etc/os-release:
[2026-03-04 02:47:02] NAME="CentOS Linux"
[2026-03-04 02:47:02] VERSION="7 (Core)"
[2026-03-04 02:47:02] ID="centos"
[2026-03-04 02:47:02] ID_LIKE="rhel fedora"
[2026-03-04 02:47:02] VERSION_ID="7"
[2026-03-04 02:47:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-04 02:47:02] ANSI_COLOR="0;31"
[2026-03-04 02:47:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-04 02:47:02] HOME_URL="https://www.centos.org/"
[2026-03-04 02:47:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-04 02:47:02] 
[2026-03-04 02:47:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-04 02:47:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-04 02:47:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-04 02:47:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-04 02:47:02] 
[2026-03-04 02:47:02] 2026-03-04 01:46:24,469 | INFO     | **************************************
[2026-03-04 02:47:02] 2026-03-04 01:46:24,972 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2026-03-04 02:47:02] 2026-03-04 01:46:24,993 | INFO     | sufficient remaining disk space (3325415129088 B)
[2026-03-04 02:47:02] 2026-03-04 01:46:24,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-04 02:47:02] 2026-03-04 01:46:24,994 | INFO     | current server update state: UPDATING_FINAL
[2026-03-04 02:47:02] 2026-03-04 01:46:24,994 | INFO     | update_server=False
[2026-03-04 02:47:02] 2026-03-04 01:46:24,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-04 02:47:02] 2026-03-04 01:46:24,994 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-04 02:47:02] 2026-03-04 01:46:24,995 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-04 02:47:02] 2026-03-04 01:46:24,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-04 02:47:02] 2026-03-04 01:46:24,995 | INFO     | will abort loop
[2026-03-04 02:47:02] 2026-03-04 01:46:25,327 | INFO     | all job control threads have been joined
[2026-03-04 02:47:02] 2026-03-04 01:46:25,617 | INFO     | all payload control threads have been joined
[2026-03-04 02:47:02] 2026-03-04 01:46:25,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-04 02:47:02] 2026-03-04 01:46:25,810 | INFO     | all data control threads have been joined
[2026-03-04 02:47:02] 2026-03-04 01:46:25,999 | INFO     | [job] retrieve thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:26,000 | INFO     | [job] job monitor thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:26,199 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-04 02:47:02] 2026-03-04 01:46:26,332 | INFO     | [job] control thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:26,467 | INFO     | [payload] validate_post thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:26,498 | INFO     | [payload] failed_post thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:26,576 | INFO     | [data] copytool_in thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:26,622 | INFO     | [payload] control thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:26,815 | INFO     | [data] control thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:27,094 | INFO     | [job] validate thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:27,168 | INFO     | [job] create_data_payload thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:27,235 | INFO     | [payload] execute_payloads thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:27,342 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:27,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-04 02:47:02] 2026-03-04 01:46:27,467 | INFO     | [payload] validate_pre thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:27,628 | INFO     | [data] copytool_out thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:28,368 | INFO     | [job] queue monitor thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:30,205 | INFO     | [data] queue_monitor thread has finished
[2026-03-04 02:47:02] 2026-03-04 01:46:31,205 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-03-04 02:47:02] 2026-03-04 01:46:55,428 | INFO     | PID=244989 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-04 02:47:02] 2026-03-04 01:46:55,429 | INFO     | .. there are 18 such processes running
[2026-03-04 02:47:02] 2026-03-04 01:46:55,429 | INFO     | found 0 job(s) in 20 queues
[2026-03-04 02:47:02] 2026-03-04 01:46:55,429 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-04 02:47:02] 2026-03-04 01:46:55,429 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-04 02:47:02] 2026-03-04 01:46:55,467 | INFO     | [monitor] cgroup control has ended
[2026-03-04 02:47:02] 2026-03-04 01:46:57,233 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23206629533504)>', '<ExcThread(monitor, started 23206391199488)>']
[2026-03-04 02:47:02] 2026-03-04 01:46:57,438 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-04 02:47:02] 2026-03-04 01:46:57,439 | INFO     | [monitor] control thread has ended
[2026-03-04 02:47:02] 2026-03-04 01:47:02,258 | INFO     | all workflow threads have been joined
[2026-03-04 02:47:02] 2026-03-04 01:47:02,258 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-04 02:47:02] 2026-03-04 01:47:02,258 | INFO     | traces error code: 0
[2026-03-04 02:47:02] 2026-03-04 01:47:02,258 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-04 02:47:02] 2026-03-04 01:47:02,454 [wrapper] ==== pilot stdout END ====
[2026-03-04 02:47:02] 2026-03-04 01:47:02,458 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-04 02:47:02] 2026-03-04 01:47:02,460 [wrapper] pilotpid: 244989
[2026-03-04 02:47:02] 2026-03-04 01:47:02,464 [wrapper] Pilot exit status: 0
[2026-03-04 02:47:02] 2026-03-04 01:47:02,478 [wrapper] pandaids: 7036240428
[2026-03-04 02:47:02] 2026-03-04 01:47:02,657 [wrapper] cleanup supervisor_pilot  468068 244990
[2026-03-04 02:47:02] 2026-03-04 01:47:02,660 [wrapper] Test setup, not cleaning
[2026-03-04 02:47:02] 2026-03-04 01:47:02,663 [wrapper] apfmon messages muted
[2026-03-04 02:47:02] 2026-03-04 01:47:02,667 [wrapper] ==== wrapper stdout END ====
[2026-03-04 02:47:02] 2026-03-04 01:47:02,671 [wrapper] ==== wrapper stderr END ====
[2026-03-04 02:47:02]  *** Error codes and diagnostics ***
[2026-03-04 02:47:02]     "exeErrorCode": 0,
[2026-03-04 02:47:02]     "exeErrorDiag": "",
[2026-03-04 02:47:02]     "pilotErrorCode": 0,
[2026-03-04 02:47:02]     "pilotErrorDiag": "",
[2026-03-04 02:47:02]  *** Listing of results directory ***
[2026-03-04 02:47:02] total 500496
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc    584627 Mar  3 09:25 pilot3.tar.gz
[2026-03-04 02:47:02] -rwx------ 1 boinc boinc     36322 Mar  3 09:25 runpilot2-wrapper.sh
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc      5111 Mar  3 09:26 queuedata.json
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc       100 Mar  4 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-04 02:47:02] -rwxr-xr-x 1 boinc boinc      7986 Mar  4 00:01 run_atlas
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc       105 Mar  4 00:01 job.xml
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc      6697 Mar  4 00:01 init_data.xml
[2026-03-04 02:47:02] -rw-r--r-- 2 boinc boinc 295412614 Mar  4 00:01 EVNT.48717036._000022.pool.root.1
[2026-03-04 02:47:02] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:01 start_atlas.sh
[2026-03-04 02:47:02] drwxrwx--x 2 boinc boinc      4096 Mar  4 00:01 shared
[2026-03-04 02:47:02] -rw-r--r-- 2 boinc boinc    597949 Mar  4 00:01 input.tar.gz
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc         0 Mar  4 00:01 boinc_lockfile
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc      2592 Mar  4 00:01 pandaJob.out
[2026-03-04 02:47:02] -rw------- 1 boinc boinc    998484 Mar  4 00:01 agis_schedconf.cvmfs.json
[2026-03-04 02:47:02] -rw------- 1 boinc boinc   1516092 Mar  4 00:01 agis_ddmendpoints.agis.ALL.json
[2026-03-04 02:47:02] -rw------- 1 boinc boinc       443 Mar  4 00:01 workernode_map.json
[2026-03-04 02:47:02] drwx------ 5 boinc boinc      4096 Mar  4 00:01 pilot3
[2026-03-04 02:47:02] -rw------- 1 boinc boinc 209730706 Mar  4 02:45 HITS.48868979._000526.pool.root.1
[2026-03-04 02:47:02] -rw------- 1 boinc boinc        95 Mar  4 02:46 pilot_heartbeat.json
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc       529 Mar  4 02:46 boinc_task_state.xml
[2026-03-04 02:47:02] -rw------- 1 boinc boinc      1025 Mar  4 02:46 memory_monitor_summary.json
[2026-03-04 02:47:02] -rw------- 1 boinc boinc    325936 Mar  4 02:46 log.48868979._000526.job.log.tgz.1
[2026-03-04 02:47:02] -rw------- 1 boinc boinc      6336 Mar  4 02:46 heartbeat.json
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc      8192 Mar  4 02:46 boinc_mmap_file
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc        26 Mar  4 02:46 wrapper_checkpoint.txt
[2026-03-04 02:47:02] -rw------- 1 boinc boinc      5017 Mar  4 02:47 pilotlog.txt
[2026-03-04 02:47:02] -rw------- 1 boinc boinc   1390918 Mar  4 02:47 log.48868979._000526.job.log.1
[2026-03-04 02:47:02] -rw------- 1 boinc boinc       357 Mar  4 02:47 output.list
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc       620 Mar  4 02:47 runtime_log
[2026-03-04 02:47:02] -rw------- 1 boinc boinc   1730560 Mar  4 02:47 result.tar.gz
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc      9204 Mar  4 02:47 runtime_log.err
[2026-03-04 02:47:02] -rw------- 1 boinc boinc       662 Mar  4 02:47 6KnMDmwFaH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmy5FLDmBrn4On.diag
[2026-03-04 02:47:02] -rw-r--r-- 1 boinc boinc     20825 Mar  4 02:47 stderr.txt
[2026-03-04 02:47:02] HITS file was successfully produced:
[2026-03-04 02:47:02] -rw------- 1 boinc boinc 209730706 Mar  4 02:45 shared/HITS.pool.root.1
[2026-03-04 02:47:02]  *** Contents of shared directory: ***
[2026-03-04 02:47:02] total 495608
[2026-03-04 02:47:02] -rw-r--r-- 2 boinc boinc 295412614 Mar  4 00:01 ATLAS.root_0
[2026-03-04 02:47:02] -rw-r--r-- 2 boinc boinc     15845 Mar  4 00:01 start_atlas.sh
[2026-03-04 02:47:02] -rw-r--r-- 2 boinc boinc    597949 Mar  4 00:01 input.tar.gz
[2026-03-04 02:47:02] -rw------- 1 boinc boinc 209730706 Mar  4 02:45 HITS.pool.root.1
[2026-03-04 02:47:02] -rw------- 1 boinc boinc   1730560 Mar  4 02:47 result.tar.gz
02:47:04 (236706): run_atlas exited; CPU time 38228.841180
02:47:04 (236706): called boinc_finish(0)

</stderr_txt>
]]>

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